Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05385 ATGTCTTCGAAACGAAATGACACGACTATTTACTTAAGAACATGCGTAGACCTGCCACCGCAGGTGAATTCCCATGTACCATGGTGGGACGTTACAGATTCAAAGACGATTTTAGTAAATTCTTTGCCAATGTTGCAGATGCAAATGTGCTTGATCTTTTTTGCAACTTTTTTCTTTAAATCGATCTTGTCTTGTTTTGGAATCCACAGGTTCACTTCTATGAGCATTGTTGGTCTTATCTTTGCAGCTACATTCAATGAAAACTGGACGAAAACGATGAAGACGTTGTTCTGGTCAGATTCACAGGAAAATCTAGGACTAATTTCAATATTTGGTTACATGCTGTTCCTATTCTACATTGGAGTAAAAACAGATATGAGTGTAGTCCATAAAACTAGGAGTGGTGCCACCAACATTGGTTCTTTAGCTATAATGGCTCCTTTTCTATGTGGCATGGCTACTCTAAGTTTTTTCTCAACAAAACCTCTTCAATATTACCAAACAAAAATACTTGTAATTATCATTGGATTGTTCTCCATGACTCCTTTCCCTGTAATCTCCTCAACTTTAAGCGATCTCAAGATCCTGAACTCTGAATTGGGTCGAATCGGGCAATCAGCGTCGTTAGTCAGTGAAATTTTCAGTGTCTTCTTAGCATCAACACTAACGTTTGGTAAATTATACGAGGACCATGGTTTAGCGAGAGCGTTGATTTGCATTGCGGCTGCTGTCTTGTTTATACTCTTGGTTATATTCATTATCCGACCGTCGATGTTTTGGATTATTAAACAGACGCCGGAAGGTGATCATGTGAGTGATAACTATGTTTATGGCGTACTCATATTAGTCTTGTTATCATCCTATGCTTCATCCAGATTTGGATTTTTCGGTCTCTTCGGACCTTTTGTATTGGGAATGGCTATACCTGAAGGACCTCCATTAGGCACTGCTATTATTAAGAAAATTGATACTTTTGTTAATGGGATTTTCATGCCAACGTTTATGACTACATGTGCAATGAGGGTAGATTTGAGAGACTTGTTGTGTTGGAGAAATAAAGTTGATGGAAGTGTTGATGTTTTTATGGTGCAAGCTTTGGTTATTGTCACGGTTTGCTTTGTTTCTAGATTTGTTGCTTGTATGATACCTCCTTTACGCCAAGAATTGCCTTTGAGAGATGCTTTTTCTTTATCTTTGATTATGAGCAGCAAAGGCATCGTTGAAATGGCTACGCTCTCTGTCGCCAGAGATACTACAGAACTACCTAATAACATATTTGCCTTATTGATGGTATGCATCATAGTAAACACCACTATGGTTCCAATGCTGTTGGGTTATATGTATGATCCAACAAAGAAGTACACAGGTTACACAAAGAGAAACATAGCAGATCTGAAAAACAACTCAGAACTTCGAGTTTTAGCATGTATTCACAGGCCCGACAATATTCCAGCGACGATAAATCTTCTCGAAGCAGCATATCCAACGAAACAAGATCCGATATGCACTTATGCACTTCAACTGATCGAGTTAATAGGACGAGCTTCTCCTATATTCATCAGCCACGAACTTCAAAAAAAGAAGAAATCGAGCACAAACACCTCGATGGCAGAGAAGCTTCTAGAGTCATTTCAAATCTTCGAAAAAGAGTTCAAAGGTTGTTTACTCGTCAACACATTCACAGCCGTATCACCAGCAGAAATGATGTATGACGATATCTGTACACTAGCACTCGACAAATTTACATCACTTATTATCCTCCCTTTTCATAGAAAATGGTCGTGCGACGGTAGCTCGGTCGAGTTGGAAGACGAGTCGTTGAGGGACTTGAACTATCGAGTTATGGAAAGAGCACCATGTTCCGTTGGCGTGTTAATCGAAAGAGCACAAATGACACATATATTCTCACTAGAAACACCATATAATGTGTGTTTGTTGTTTATAGGTGGGAAAGATGATAGAGAAGCACTTATATTCACAAAGAGAATGACCAAGAATCCACATGTTAAGGTAACAGTGGTTAGATTCATTAGTTTGGAAGTTGATTCAAAGGTTTGCTGGGAGCGTTTACTTGATAATGAGTTGTTGGATGAGATAAAGACAAAGAATAAAGTTGGAAATGTTTATGTAAAATATGTTGAGGAAACAGTGAAAGATGGACCTGAAACAGCATTGATAATAAGGTCTTTGGTGACTGAATTTGATTTGATTATTGTTGGGAGACAAGCAGGGATTGAAACACCTCAAACATGTGGATTGTTGCAATGGAGTGAGTATCCTGAACTTGGTGTTTTGGGTGATTTGTTGGCTTCTACTGATGCTGCTGGTAAAGCATCTGTCTTTGTTATACAACAACAAAGAACAGCTATGGATATTTGA 2379 0.3859 MSSKRNDTTIYLRTCVDLPPQVNSHVPWWDVTDSKTILVNSLPMLQMQMCLIFFATFFFKSILSCFGIHRFTSMSIVGLIFAATFNENWTKTMKTLFWSDSQENLGLISIFGYMLFLFYIGVKTDMSVVHKTRSGATNIGSLAIMAPFLCGMATLSFFSTKPLQYYQTKILVIIIGLFSMTPFPVISSTLSDLKILNSELGRIGQSASLVSEIFSVFLASTLTFGKLYEDHGLARALICIAAAVLFILLVIFIIRPSMFWIIKQTPEGDHVSDNYVYGVLILVLLSSYASSRFGFFGLFGPFVLGMAIPEGPPLGTAIIKKIDTFVNGIFMPTFMTTCAMRVDLRDLLCWRNKVDGSVDVFMVQALVIVTVCFVSRFVACMIPPLRQELPLRDAFSLSLIMSSKGIVEMATLSVARDTTELPNNIFALLMVCIIVNTTMVPMLLGYMYDPTKKYTGYTKRNIADLKNNSELRVLACIHRPDNIPATINLLEAAYPTKQDPICTYALQLIELIGRASPIFISHELQKKKKSSTNTSMAEKLLESFQIFEKEFKGCLLVNTFTAVSPAEMMYDDICTLALDKFTSLIILPFHRKWSCDGSSVELEDESLRDLNYRVMERAPCSVGVLIERAQMTHIFSLETPYNVCLLFIGGKDDREALIFTKRMTKNPHVKVTVVRFISLEVDSKVCWERLLDNELLDEIKTKNKVGNVYVKYVEETVKDGPETALIIRSLVTEFDLIIVGRQAGIETPQTCGLLQWSEYPELGVLGDLLASTDAAGKASVFVIQQQRTAMDI 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05385 792 Gene3D - 44 455 IPR038770 -
Vivi2g05385 792 PANTHER CATION/H + ANTIPORTER 36 787 - -
Vivi2g05385 792 Pfam Sodium/hydrogen exchanger family 50 441 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05385 Vivi-Chr2 178744330 178747561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05385 20 787 Antiporter Super Family AT5G22900 36.330 1.00e-172 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05385 K26731 - gmx:100785558 1045.8