Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05375 ATGTACTCAAATCCTCCTATGAATTACCCTTATCTTACACCTTCATCTCATCAATGGAGCATCCCTCCTACCTATCCCACAAACCCCTCTTTCACAACTCCTATCACACCTTCATTTCCATCCTTTCCATGGGAACTTTTCTCATCCTATTACACAAATCCATATGTTCCAACATCATCACCAAGTTTGTATCCAAATCATGGATATTCACCACATCCACCTAACCCTAATCCATATTCATCTTACTCATCATCTCCTTATTCATATTCATATGACTACAATATTTATCACCAACAACTCCAACCAACCAACACCTCCTCCATAATTTCTCATCAATATCAAACCTATTCTAGAAATAGAAGAGATTTTGATAAATATCTCCAACTGACTCATTCCTCTTTTAAGAAATTATCTCAAAAAAATTCTCAAAAGCTTTCTGTTTCGCGAAAAAAACAAAAAGCTAAGTTTCCCAAAGTTCTCTTTGAAACAAATCTAAAACAACAATCAGAACAAACTCATAATCCGAACATGGTCGGATTTTCTGCTTTCAACTTTGAATTGTCTTCTTTCACCGCGACTTCTTCTATGTTCGGATCTTCATCGGCGAATTCAACACAGTTTGGAGCATCTTTTTCGAACCCATTTGGAGCACCGTCGGATTCTCCACCGTTTGGAGCATCTACCTCGGCTTCTTCGACTTCTTCAACGCTGTTTGGGGCACCATCGTCGTCCTCGACCTCTTCGACTCCGTTGGGATTTGCGTCTTACATAACACCGTTTGGAGGAACTTCATCTGCTTCGACAACATCAACTCTGTTTGGTGGAACATCATCTACGACTGCAACAACAACATCCGTTTTTAACTCATATGAGACCGGCGCGAAGATATTGTTGTTTAATGATGTTTTAGAACATAATGCATATAAGGTGTTTGATAAAATACCTCTCTATGTTTCTGATGAGCTTACGTCGGAAGATACTGGTTCTATTGTTTCTATTGAAGCTGAGAATGACGAGGAAAGGATTGTGGATGGACAAGGTTTTCGAATTAGAGCAGATTGTGATGGATACTCTACTGCTAGTTCAATTGATTATGATGGTTTTAGTGACAGCGTGATGCAACACCGTTCCCAACAACCACGGTTCCCAGGGGAGTTAGATTTGGAGTTGCAGCAAGGTTTCCCTTTGAATACCATAGCGAAACCTCCACGACCTCCGGAACCTCCAGTTGTGTTGAATGCCTCAGCAGGCTCATATATTAGCGCCGAGACAGAATCTATACGTTGTGATTTTTCTGCAACATTATCACCAAAAGTCCCTTTGACTTCTCAAGAAATCACACCTTCACCAGCAGTAGAATCAAGTTTTGAACCCCCGGGTCAGATCAATTCACAAAAAGCAATAGAAGAAGGCGAGGAATATCTTGAGGTTCAAAATTGTGGCGTGGAAACAAATGATCATCCACACTCAATCTCATTGGAGTTACACGACCCTACCGGTTCCACGACTAACAACAACACCGAAATTGTGAATTTTGATTCTGCGGCAATAGAAATAGTTATCGAATCACTGACATTAGCATGGCCAGATGCACCGGGAACAAGCTTTGAACCCTTGACTGAACTTGGTCTACATACTGAAACAGAACCTCAAGTATCGGAAGCTGTAGCATATATTGAGAGCCACCATCCTACTGAGGAAACCGATATTGAGATTGATGCCGCTTCCGAGGTTAGTGCTGAAACCGAAACTGAAAATGAAGGTTCTCAAGTGAAAGTGGAGATGGATGTTCTCACTGGTGAGATGGTAATAATTCAATTGCCTCAAGTGTCGGTTTATCTTACGTATGGTGATAAAGATTTTGAAAAGTCAATAGTATATTACAGCAAATTTGGAGATTATTCAAATTCTTCTCAAATGGCATTCTTTCTCAATTATTCTCGCACTCTTCGTTTCATTCGTTCTCCCATTCCCGCAATGCTTCTTTCTTCTTCTGCATTTCAACAAGGTGATTATTTGGTGCTAAACAAGTGCAAGCCGATGGATTTCGGTAATGCTTGTTGGACGTATAAACAATTTACGAATGATATTCAGACAAGGCAATATAGATGTCCCGAGGTTCTTCTTGGTTCCAACTACTCAACTCCAGCTGATATGTGGTTCTTTGCTTGCTTTTGCTTTGAGCTTGCCACTAGTGATGTTCCTTTTTATCCTCACAGTGGTGATAACGATGATAGGGATGGGGACCATCTGGCGTTGATGAGGGAGCTTCTTGGAATGATGCCTCGCAAGATTGCTCTTAATGGTCGTTATTCCCGACACTTTTTCAATAGATGTAGTGATTGGCGACACATTTGTCGGTTGCGGTTCTGGCCTATCACTAAGGTGCTGCATGTGGGTTGCAAGAGTGGAAATTGCATATGGTCTGCTTCATATCCCAGAAACAAGGCATCTGCTAGATCTGTCAAGGGGATTAAGAAAATTGGTGTCATTGGTTCTCCTTTCACATTTGCCACTACATTAGAGCATGAATACAAGAGTGATATCTTTGGAGAGAGAGGAATTTTATTGGGTGCCGTTCATGGAATTGTTGAGTCCTTGTTTAGAAGGTACACTGAAAATGGAATGAGTGAAGATCTTGCTTATAAGAACACTGTTGAGTCCATAACAGGAGTAATATCTAAAACCATCTCAACTCAGGGCATGTTGGCTGTATACAATGCTTTATCTGAAGATGGAAAGAAGGAATTTGAGAAAAGTTATGGTAAAGCGGTGCAATTCTTTACCATGTTCCGAAAATCAAAATTACCTTGCATGATAAAATTGATTTTTCAAGTTCTGAATTTTGTGTTGCAAATAATCAGTGACAATTTTTCATTCAAGCAATGGGATCCAGGAACAATATCTCTATTCTCATATTGA 2922 0.4021 MYSNPPMNYPYLTPSSHQWSIPPTYPTNPSFTTPITPSFPSFPWELFSSYYTNPYVPTSSPSLYPNHGYSPHPPNPNPYSSYSSSPYSYSYDYNIYHQQLQPTNTSSIISHQYQTYSRNRRDFDKYLQLTHSSFKKLSQKNSQKLSVSRKKQKAKFPKVLFETNLKQQSEQTHNPNMVGFSAFNFELSSFTATSSMFGSSSANSTQFGASFSNPFGAPSDSPPFGASTSASSTSSTLFGAPSSSSTSSTPLGFASYITPFGGTSSASTTSTLFGGTSSTTATTTSVFNSYETGAKILLFNDVLEHNAYKVFDKIPLYVSDELTSEDTGSIVSIEAENDEERIVDGQGFRIRADCDGYSTASSIDYDGFSDSVMQHRSQQPRFPGELDLELQQGFPLNTIAKPPRPPEPPVVLNASAGSYISAETESIRCDFSATLSPKVPLTSQEITPSPAVESSFEPPGQINSQKAIEEGEEYLEVQNCGVETNDHPHSISLELHDPTGSTTNNNTEIVNFDSAAIEIVIESLTLAWPDAPGTSFEPLTELGLHTETEPQVSEAVAYIESHHPTEETDIEIDAASEVSAETETENEGSQVKVEMDVLTGEMVIIQLPQVSVYLTYGDKDFEKSIVYYSKFGDYSNSSQMAFFLNYSRTLRFIRSPIPAMLLSSSAFQQGDYLVLNKCKPMDFGNACWTYKQFTNDIQTRQYRCPEVLLGSNYSTPADMWFFACFCFELATSDVPFYPHSGDNDDRDGDHLALMRELLGMMPRKIALNGRYSRHFFNRCSDWRHICRLRFWPITKVLHVGCKSGNCIWSASYPRNKASARSVKGIKKIGVIGSPFTFATTLEHEYKSDIFGERGILLGAVHGIVESLFRRYTENGMSEDLAYKNTVESITGVISKTISTQGMLAVYNALSEDGKKEFEKSYGKAVQFFTMFRKSKLPCMIKLIFQVLNFVLQIISDNFSFKQWDPGTISLFSY 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05375 973 Gene3D Transferase(Phosphotransferase) domain 1 678 797 - -
Vivi2g05375 973 SMART serkin_6 536 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g05375 973 FunFam SRSF protein kinase 2 isoform X3 655 808 - -
Vivi2g05375 973 SUPERFAMILY Protein kinase-like (PK-like) 680 798 IPR011009 -
Vivi2g05375 973 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 842 924 IPR008927 -
Vivi2g05375 973 ProSiteProfiles KARI C-terminal domain profile. 840 973 IPR000506 GO:0004455|GO:0009082
Vivi2g05375 973 MobiDBLite consensus disorder prediction 441 460 - -
Vivi2g05375 973 Pfam Protein kinase domain 678 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g05375 973 Gene3D - 835 930 IPR013328 GO:0016491
Vivi2g05375 973 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 674 798 - -
Vivi2g05375 973 Pfam Acetohydroxy acid isomeroreductase, catalytic domain 842 925 IPR000506 GO:0004455|GO:0009082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05375 Vivi-Chr2 178637047 178639968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05375 674 797 EF-hand Containing Proteins AT5G22840 77.419 1.44e-61 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Vivi2g05375 IlvC 1.9e-21 CL0106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05375 K08832 - vvo:131650754 1796.94