Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05363 ATGGTATCCAATAACCCGAACCCACCCGAAGGTTTTTGCTTGGATCCGACTGGAATGCCTCTACCCGGTTTCGGCCCCTTCGCCTCCGTCTCCGCCGCCTCTAACTCGTCGGACGATGCTTCCAAGAAGATCCGTAAGCCGTATACTATAACCAAGTCTAGGGAGAATTGGACCGAACCTGAACATGACAAGTTTCTTGAAGCTCTTCAACTGTTTGACCGTGACTGGAAAAAGATTGAAGCATTTATTGGATCAAAGACTGTTATACAGATACGTAGCCATGCGCAGAAATACTTTCTAAAGGTTCAGAAGAGTGGAGCAAATGAACATCTTCCTCCACCTAGGCCTAAAAGAAAAGCTGCCCATCCATATCCACAAAAAGCTCCCAAAAGTGCTCCTATACTTTCACAAGTACCGGGATCTTTTCAGTCTTCACCGGCTTTGCTTGAACCTGGATATACAGTGAAGCTTGAATCCATACCAATGGCTGAAACTCCTATTATGAACAATGTGGTGTCTTCCTGGTCAAACCACACGCAGCAAAACACCAATTTACTTAATGCTCCAAAAGTGAATAATTCTTGCAGCAGCAGTGAAAGTACTCCTAAAGTGCGGCCAGTGGTTGGTGAATCAAATAGTCTAGTGAATAAAATCCTTCCATTGAGAGTTCTTCCAGATTTTTCCCAAGTATACAACTTCATTGGCAGTGTATTTGACCCAGAAGCAACTGAGCATTTACAGAAACTTAAACAGATGGACCGTATAGATGTTGAGACGGTGCTTCTGTTGATGAGAAACCTGTCTATCAATTTAACTAGCCCGGATTTTGAGGATCATAAAAAGCTGCTTTCATCCTATGAAGTTGATCATGAGACAAATAACTATCTCAATCCAGATAGACCTATGCACGACGAGCCGTTGAAGAGTGCTACTACTTAA 939 0.4313 MVSNNPNPPEGFCLDPTGMPLPGFGPFASVSAASNSSDDASKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKSGANEHLPPPRPKRKAAHPYPQKAPKSAPILSQVPGSFQSSPALLEPGYTVKLESIPMAETPIMNNVVSSWSNHTQQNTNLLNAPKVNNSCSSSESTPKVRPVVGESNSLVNKILPLRVLPDFSQVYNFIGSVFDPEATEHLQKLKQMDRIDVETVLLLMRNLSINLTSPDFEDHKKLLSSYEVDHETNNYLNPDRPMHDEPLKSATT 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05363 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 49 103 IPR017930 -
Vivi2g05363 312 FunFam protein REVEILLE 6 isoform X1 56 104 - -
Vivi2g05363 312 Pfam Myb-like DNA-binding domain 54 99 IPR001005 -
Vivi2g05363 312 MobiDBLite consensus disorder prediction 292 312 - -
Vivi2g05363 312 CDD SANT 56 99 IPR001005 -
Vivi2g05363 312 SUPERFAMILY Homeodomain-like 48 104 IPR009057 -
Vivi2g05363 312 MobiDBLite consensus disorder prediction 104 138 - -
Vivi2g05363 312 NCBIfam myb-like DNA-binding domain, SHAQKYF class 52 101 IPR006447 GO:0003677
Vivi2g05363 312 Gene3D - 56 104 - -
Vivi2g05363 312 MobiDBLite consensus disorder prediction 292 306 - -
Vivi2g05363 312 PANTHER SWI/SNF COMPLEX-RELATED 35 272 - -
Vivi2g05363 312 ProSiteProfiles SANT domain profile. 52 103 IPR017884 -
Vivi2g05363 312 ProSiteProfiles Myb-like domain profile. 49 99 IPR001005 -
Vivi2g05363 312 SMART sant 53 101 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05363 Vivi-Chr2 178491708 178496755 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi2g05363 Myb_DNA-binding 7.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05363 - - gmx:100783949 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05363 2 178491708 178496755 Vivi2g05363 2 178491708 178496755 ECH