Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05356 ATGGCTCTCATCCTGCATACTGGTGAAGGAAACAAAAATGCTTACAAGGCACTCATTGCTGCCGAGTATGCTTCTGTCCAAGTCCAGTACACCCCTAACTTTGAATTTGGTGTCTCTAATAAAACACCTCAATTCCTCAAAATGAATCCTCTCGGCAAGGTTCCCGTTTTGGAAACCCTTCACGGCCCTGTCTTCGAGAGCAACGCTATTGCTCGTTATGTTGCTCGATCCAAGGATGACAACACTCTCTATGGATCTTCTCTCGTCGAATATCCCTCCCTTTCAGCTCAGGTTGAACAATGGATTGATTTCTCATCATTGGAGATTGATTCCAACATTCTTAGGTGGTACTACTCTAGATTGGGATATGAGCCATACCTTCCTCCTAGTACGTACTATCTCTACGAACCAAAGAAGGAGGCCAAGAAGGTCGCTGAAAAGTCCAAAGAAGCAGAGGCTGGAGAGGAGGCACCCAAGCCCAAACCCAAGAATCCACTTGATCTTCTTCCTCCCTGTAAGATGGTACTGGATGAATGGAAAAGACTTTACTCAAACACTAAATCCAACTTCAGGGAGGTTGCAATCAAAGGATTTTGGGATATGTATGATCCTGAAGGATATTCTCTCTGGTTCTGTGACTACAAATACCAAGATGAGAACACTGTTTCCTTCGTGACTTTGAACAAGGTTGGTGGATTTCTTCAGCGGATGGATTTGGCCCGCAAGTATGCATTTGGAAAGATGCTTATCATTGGATCTGAGCCACCTTTTAAGATGCAAGTCAGTCCCGGATTTGAAAAAGAGATATTTAAGAATCCATGTTGTACTGTTTTGGTAAGATCTGTGTGGGCAGTAATGTATGATTTCTTAACTGAAGCGAACCCTATTTTCAGGTTATTTTACGTGTATTCGATTAATGTAGCAGTGTATTTCAATGGTTGCAACGCTGCTGTTGAAACCAAGATTCCAGATGGCCCCGAATTCCTTGCCACCTTGAGAGAAACGTTGAATAATTTGCTTCCTGATTTCGATAATAGAAGGGTGACAAAGATCGAGTTTCGGGAGGACTAG 1071 0.4304 MALILHTGEGNKNAYKALIAAEYASVQVQYTPNFEFGVSNKTPQFLKMNPLGKVPVLETLHGPVFESNAIARYVARSKDDNTLYGSSLVEYPSLSAQVEQWIDFSSLEIDSNILRWYYSRLGYEPYLPPSTYYLYEPKKEAKKVAEKSKEAEAGEEAPKPKPKNPLDLLPPCKMVLDEWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYQDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLIIGSEPPFKMQVSPGFEKEIFKNPCCTVLVRSVWAVMYDFLTEANPIFRLFYVYSINVAVYFNGCNAAVETKIPDGPEFLATLRETLNNLLPDFDNRRVTKIEFRED 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05356 356 SUPERFAMILY eEF1-gamma domain 162 258 IPR036433 GO:0003746|GO:0006414
Vivi2g05356 356 CDD GST_N_EF1Bgamma 5 77 - -
Vivi2g05356 356 Gene3D Glutaredoxin 1 74 - -
Vivi2g05356 356 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Vivi2g05356 356 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 162 262 IPR036433 GO:0003746|GO:0006414
Vivi2g05356 356 SMART EF1G_2 161 266 IPR001662 GO:0003746|GO:0006414
Vivi2g05356 356 FunFam Elongation factor 1B gamma 1 74 - -
Vivi2g05356 356 SUPERFAMILY Thioredoxin-like 2 85 IPR036249 -
Vivi2g05356 356 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 136 260 IPR044628 GO:0004364
Vivi2g05356 356 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 162 260 IPR001662 GO:0003746|GO:0006414
Vivi2g05356 356 Pfam Glutathione S-transferase, N-terminal domain 2 76 IPR004045 -
Vivi2g05356 356 Pfam Elongation factor 1 gamma, conserved domain 161 259 IPR001662 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05356 Vivi-Chr2 178280335 178285463 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05356 164 260 Eukaryotic Initiation Factors Gene Family AT1G57720 89.691 1.11e-57 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05356 K03233 - vvo:131611445 203.756