Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g05356 | ATGGCTCTCATCCTGCATACTGGTGAAGGAAACAAAAATGCTTACAAGGCACTCATTGCTGCCGAGTATGCTTCTGTCCAAGTCCAGTACACCCCTAACTTTGAATTTGGTGTCTCTAATAAAACACCTCAATTCCTCAAAATGAATCCTCTCGGCAAGGTTCCCGTTTTGGAAACCCTTCACGGCCCTGTCTTCGAGAGCAACGCTATTGCTCGTTATGTTGCTCGATCCAAGGATGACAACACTCTCTATGGATCTTCTCTCGTCGAATATCCCTCCCTTTCAGCTCAGGTTGAACAATGGATTGATTTCTCATCATTGGAGATTGATTCCAACATTCTTAGGTGGTACTACTCTAGATTGGGATATGAGCCATACCTTCCTCCTAGTACGTACTATCTCTACGAACCAAAGAAGGAGGCCAAGAAGGTCGCTGAAAAGTCCAAAGAAGCAGAGGCTGGAGAGGAGGCACCCAAGCCCAAACCCAAGAATCCACTTGATCTTCTTCCTCCCTGTAAGATGGTACTGGATGAATGGAAAAGACTTTACTCAAACACTAAATCCAACTTCAGGGAGGTTGCAATCAAAGGATTTTGGGATATGTATGATCCTGAAGGATATTCTCTCTGGTTCTGTGACTACAAATACCAAGATGAGAACACTGTTTCCTTCGTGACTTTGAACAAGGTTGGTGGATTTCTTCAGCGGATGGATTTGGCCCGCAAGTATGCATTTGGAAAGATGCTTATCATTGGATCTGAGCCACCTTTTAAGATGCAAGTCAGTCCCGGATTTGAAAAAGAGATATTTAAGAATCCATGTTGTACTGTTTTGGTAAGATCTGTGTGGGCAGTAATGTATGATTTCTTAACTGAAGCGAACCCTATTTTCAGGTTATTTTACGTGTATTCGATTAATGTAGCAGTGTATTTCAATGGTTGCAACGCTGCTGTTGAAACCAAGATTCCAGATGGCCCCGAATTCCTTGCCACCTTGAGAGAAACGTTGAATAATTTGCTTCCTGATTTCGATAATAGAAGGGTGACAAAGATCGAGTTTCGGGAGGACTAG | 1071 | 0.4304 | MALILHTGEGNKNAYKALIAAEYASVQVQYTPNFEFGVSNKTPQFLKMNPLGKVPVLETLHGPVFESNAIARYVARSKDDNTLYGSSLVEYPSLSAQVEQWIDFSSLEIDSNILRWYYSRLGYEPYLPPSTYYLYEPKKEAKKVAEKSKEAEAGEEAPKPKPKNPLDLLPPCKMVLDEWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYQDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLIIGSEPPFKMQVSPGFEKEIFKNPCCTVLVRSVWAVMYDFLTEANPIFRLFYVYSINVAVYFNGCNAAVETKIPDGPEFLATLRETLNNLLPDFDNRRVTKIEFRED | 356 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g05356 | 356 | SUPERFAMILY | eEF1-gamma domain | 162 | 258 | IPR036433 | GO:0003746|GO:0006414 | |
Vivi2g05356 | 356 | CDD | GST_N_EF1Bgamma | 5 | 77 | - | - | |
Vivi2g05356 | 356 | Gene3D | Glutaredoxin | 1 | 74 | - | - | |
Vivi2g05356 | 356 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 82 | IPR004045 | - | |
Vivi2g05356 | 356 | Gene3D | Translation elongation factor EF1B, gamma chain, conserved domain | 162 | 262 | IPR036433 | GO:0003746|GO:0006414 | |
Vivi2g05356 | 356 | SMART | EF1G_2 | 161 | 266 | IPR001662 | GO:0003746|GO:0006414 | |
Vivi2g05356 | 356 | FunFam | Elongation factor 1B gamma | 1 | 74 | - | - | |
Vivi2g05356 | 356 | SUPERFAMILY | Thioredoxin-like | 2 | 85 | IPR036249 | - | |
Vivi2g05356 | 356 | PANTHER | ELONGATION FACTOR 1-GAMMA 1-RELATED | 136 | 260 | IPR044628 | GO:0004364 | |
Vivi2g05356 | 356 | ProSiteProfiles | Elongation factor 1 (EF-1) gamma C-terminal domain profile. | 162 | 260 | IPR001662 | GO:0003746|GO:0006414 | |
Vivi2g05356 | 356 | Pfam | Glutathione S-transferase, N-terminal domain | 2 | 76 | IPR004045 | - | |
Vivi2g05356 | 356 | Pfam | Elongation factor 1 gamma, conserved domain | 161 | 259 | IPR001662 | GO:0003746|GO:0006414 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g05356 | Vivi-Chr2 | 178280335 | 178285463 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g05356 | 164 | 260 | Eukaryotic Initiation Factors Gene Family | AT1G57720 | 89.691 | 1.11e-57 | 191 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g05356 | K03233 | - | vvo:131611445 | 203.756 |