LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi2g05344	ATGGACACTCAAAATCTGATCATACATTTCATTCTTGTGATGTTCATTCCCTTTTCATTCTCTTCTTTCATTCCTCTAGACAACTATCTTCTCAACTGTGGATCAAATTCCAATGCAACCCTTTTCAACAGGCTTTTCATAGGTGATGTTTTCACCAACAAAGGTTCAATTTTGATCTCTGCAGACAACTCAATTTCCTTAACCAACCAAAACCCTCCTCCAAATTTGTCTACTTTGTATCAAACTGCGAGAGTTTTCACCAAAATGGGAAGTTACAGGTTCATCTTGAAGCAAAATGGTACCTTGTTTGTTCGTTTTCATTTCTCATCTTTTAAGGCTCAAGGTTTTGATCTAAAAGATGCTAACTTTAGTGTCTTGGTTGGTGGAAAATTGATTTTGAATAGTTTCAATCCTAAGGCTAGTAGTACTAATGATGCAATTGTTAAAGAGTTTATTTTGAAAGTGGAATTGAATTTGCTTGAAATTGTGTTTATACCTGTTGGTGATTCTGGTTTTGGCTTTGTTAATGGTGTTGAAGTGTTTTCTGCTCCTGAAGATTTTGTTCTAGATTATGGAGCTAAATTTGTTGATTCTTTTGGTGTTAGGGAATACAAGAATCTTTCTTACGATGTTTTAGAAACGATTCATAGGATTAATGTTGGAGGTGTGAAACTAACTCCTTTTAATGATACCCTTTGGAGGACATGGATTCCTGATAGTGATTTTCTGGTTTTTAAGGAAGCTGCTAAGGCTGTAGTGAGCACTCACACACCGAATTATCAGAAAGGAGGCGCGACTCGAGAGATCGCGCCCGATAATGTTTATATGACTGCTCAGGAAATGAATAGGGACAACCAGTCCATTTTAGCTTCACAATTCAACATAACATGGAATTTTCAAGTGGCTTCTGTCGGTGTTCGACACTTGGTTCGATTGCATTTTTGCGACATTGTTAGTCCTTCTCTTAATTTGCTATACTTTGATGTGTATATTAATAGTTATTCTGCGTATAAGGATGTTGATCTGTCGTCGCTTACTTTCCATATGCTCGCATCTCCGGTTTATGTGGATTTCGTTGTTGATTCTGATGATTCGGGTGTTATTCAAATAAGTGTTGGTCCTTCTGCTCTTAGTAGTTCAATGAGGACGAATGCGATACTTAATGGCGCGGAGATTATGAAGGTTGTGAATGTTATGGATTCAAGTTCACATGTTGGTTCTAGGAAGAAAAGGTTGTTGGAGGTGCTGGTTGGTTCAATTGTTGGAGGGACTATTGTTTTAATTTTAGTTATAGCTGTTTTTCTAGTTTGTCGCGAACGCAGGAAGAAGAAGCCGAAACTAAGAACAGTTGAAAGTGTTGGATGGACGCCTTTACGCATGTTTGGAGGGAGTTCACTTAGCAGAATGTCGGACGGGACAGCTTATCATTCGCCCGGTTCATATGGACATTTCGGCTTGAAAATTGCCTTTGCTGATATACAATTAGCAACTAACAATTTCGACGAAAGTCTAGTTATAGGATCGGGCGGATTCGGTATGGTTTACAAAGGTGTTCTAAGAGACAATTTGAAGGTTGCTGTCAAAAGAGGCATGCCAGGATCAAGACAAGGTTTACCTGAATTCCAAAGCGAAATAACGATTTTATCCAATATTCGCCATCGACATCTTGTTTCTCTAGTTGGCTTCTGCGAAGAGAATTCGGAAATGATACTTGTCTATGAGTATGTCGAAAGAGGGCCACTCAAAGATCATCTATATGGTTCAGAAGGACTTCTTCAACCTTTGTCGTGGAAAAAGCGTCTCGAGATATGCATCGGTGCAGCTCGAGGTCTACACTATCTCCACACCGGTTTCACACAAGGAATCATCCACCGCGACATTAAATCGACCAACATTTTACTCGACGAAAACTATGTTGCTAAGGTTGCTGATTTCGGTCTGTCAAGATCAGGACCTTGCATCGATGAAACACACGTGAGTACTAATGTGAAAGGTAGTTTCGGTTATCTTGATCCGGAGTATTTTCGAAGGCAACAACTTACGGATAAATCAGATGTTTATTCGTTCGGCGTTGTTCTTTTCGAGGTTCTTTGTGTTAGACCTGCTGTTGATCCACAACTTGACAGGGAACAAGTGAATTTAGCAGAATGGGCTCTTAAATGGCAGAAGAAGGGTATGTTGGAGCATATTATTGATCCTTATCTTGTTGGTAAGATCAAAGAAAGCTCATTGAAGAAATTTTCTGAAACCGCGGAGAAATGTTTGGCCGAATACGGCGTTGATAGGCCATCTATGGGCGATGTGTTATGGAATTTGGAATATGCACTTCAGCTTCAAGAAAGTGATCAAGAAGTGAATGCCACATATGCTAGCAGCATTGGTGATTCACAAGTGAATGCTACATCTTCTATAAGTCCTAGGAATCCTCCTAGCAGCATAAGATTAGAGGGAGATTATGATAACAATTATTCTGATGTAAGTACTACAAAAGTTTTTTCTCAACTAATGACTAGGGAAGCTAGATAA	2526	0.3923	MDTQNLIIHFILVMFIPFSFSSFIPLDNYLLNCGSNSNATLFNRLFIGDVFTNKGSILISADNSISLTNQNPPPNLSTLYQTARVFTKMGSYRFILKQNGTLFVRFHFSSFKAQGFDLKDANFSVLVGGKLILNSFNPKASSTNDAIVKEFILKVELNLLEIVFIPVGDSGFGFVNGVEVFSAPEDFVLDYGAKFVDSFGVREYKNLSYDVLETIHRINVGGVKLTPFNDTLWRTWIPDSDFLVFKEAAKAVVSTHTPNYQKGGATREIAPDNVYMTAQEMNRDNQSILASQFNITWNFQVASVGVRHLVRLHFCDIVSPSLNLLYFDVYINSYSAYKDVDLSSLTFHMLASPVYVDFVVDSDDSGVIQISVGPSALSSSMRTNAILNGAEIMKVVNVMDSSSHVGSRKKRLLEVLVGSIVGGTIVLILVIAVFLVCRERRKKKPKLRTVESVGWTPLRMFGGSSLSRMSDGTAYHSPGSYGHFGLKIAFADIQLATNNFDESLVIGSGGFGMVYKGVLRDNLKVAVKRGMPGSRQGLPEFQSEITILSNIRHRHLVSLVGFCEENSEMILVYEYVERGPLKDHLYGSEGLLQPLSWKKRLEICIGAARGLHYLHTGFTQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCIDETHVSTNVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCVRPAVDPQLDREQVNLAEWALKWQKKGMLEHIIDPYLVGKIKESSLKKFSETAEKCLAEYGVDRPSMGDVLWNLEYALQLQESDQEVNATYASSIGDSQVNATSSISPRNPPSSIRLEGDYDNNYSDVSTTKVFSQLMTREAR	841

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi2g05344	841	SUPERFAMILY	Protein kinase-like (PK-like)	474	772	IPR011009	-
	Vivi2g05344	841	ProSitePatterns	Protein kinases ATP-binding region signature.	506	528	IPR017441	GO:0005524
	Vivi2g05344	841	ProSiteProfiles	Protein kinase domain profile.	500	775	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi2g05344	841	PANTHER	OS07G0166700 PROTEIN	487	779	IPR045272	GO:0004714\|GO:0006468
	Vivi2g05344	841	CDD	STKc_IRAK	506	773	-	-
	Vivi2g05344	841	Gene3D	Phosphorylase Kinase; domain 1	469	575	-	-
	Vivi2g05344	841	SMART	serkin_6	500	775	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi2g05344	841	Gene3D	Transferase(Phosphotransferase) domain 1	576	799	-	-
	Vivi2g05344	841	Pfam	Protein tyrosine and serine/threonine kinase	505	768	IPR001245	GO:0004672\|GO:0006468
	Vivi2g05344	841	MobiDBLite	consensus disorder prediction	798	819	-	-
	Vivi2g05344	841	Gene3D	-	211	396	-	-
	Vivi2g05344	841	Gene3D	-	28	184	-	-
	Vivi2g05344	841	FunFam	Putative receptor-like protein kinase	28	184	-	-
	Vivi2g05344	841	FunFam	Receptor-like protein kinase FERONIA	211	397	-	-
	Vivi2g05344	841	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	622	634	IPR008271	GO:0004672\|GO:0006468
	Vivi2g05344	841	FunFam	receptor-like protein kinase FERONIA	466	575	-	-
	Vivi2g05344	841	Pfam	Malectin-like domain	31	395	IPR024788	-
	Vivi2g05344	841	FunFam	Receptor-like protein kinase FERONIA	576	789	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi2g05344	Vivi-Chr2	178051535	178054436	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi2g05344	23	841	Receptor kinase-like Gene Family	AT3G46290	49.220	0.0	735

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Vivi2g05344		Malectin_like	6e-30	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi2g05344	-		-	psat:127128324	1521.91