Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05295 ATGGCATCAATATCCTCATCTTCCTTTACTTACGGATGGAAATATGATGTGTTTCTAAGCTTCAGAGGCCAAGATACTCGGCACGGTTTTACTGGTTATCTGTACAAAGCGCTGATTGATAGCGGAATTCACACCTTCATTGATGATGATGAACTTCAAAGAGGGGAACAGATTATGCCATCACTTGTCAAGGCAATTGCAGAGACAAGAATTGCTATTATTGTGTTCTCTAAGAACTATGCTTTTTCGCCCTTTTGTTTAGACGAACTCGTTATCATCCTCGCCTTAATTAAGGACAAGGGTCGGTTGGTTTTTCCGGTTTTCTATGACGTCGATCCTTCCGATGTTCGACATCAGAGAGGTAGTTTTAAAGAAGCACTGGCTAAACATGAGGAAAGATTCCAAAATGACAAGGAGAAGGTGCAAAAATGGAGGACAGCTTTGTGTCAAGCAGCTGATTTGTCTGGCTATCATTTCAAACATGGGAATGAGAATGAATATGAGTTTATAGAGAAGATTATTAAAGGGGTCTCCGGCATTATTAATCGCATTCCTTTACATATTGCGGATTATCCTGTTGGATTGGACTCCCGTGTGCTAAAAGTAACCTCGCTTTTAAATGTCGGATCAGACGAAGTCCACATGGTAGGAATTCACGGTATTGGTGGAATTGGTAAAACAACAATCGCTCGAGCTCTTTATAATATGATTGCCGATCAATTTGAAGGTTTGTGTTTTATTGATAATGTAAGGGAGAATTCAGTTAAACACGGATTAGTACATCTCCAAGAAACACTTCTTTATGATATTATTGGGAAGAAGTATATGAAGTTGGGAAGTGTCAATGAAGGAATTCCAATAATAAAGCATAGGCTTCACCTAAAGAAGGTTCTTTTGGTTCTTGATGATGTTGACAAACTAGAGCAGTTGAGGGCAATAGTTGGAGAGACTAGTTGGTTTGGTCCTGGCAGCAGAGTAATCATTACCACTCGGGACAAGCATTTGTTAACAAGTCACGGGGTTGAAAAAACATATGAGGTAGATGGGTTGAATATGAAAGAAGCACTTGAATTGATTTGTTGGAATGCTTTTAAAACAGAAAAATTTGATTCAAGTTATAACAGCGTTTTAAGACGTGCATTGAGCTATGCTTCTGGTCTTCCATTGGCTTTGGAGGTAATGGGTTCTCACTTAGTTGGAAAAAGTATAAAAGAATGGGAGTCGGCAATAGATCAGTTTGAAAGAATTGCTGATGAAAAGATTCACAACATACTTAAAGTAAGTTTCGATAGTTTGGAGGAAGATCAGCAGAAAATATTTCTTGATATTGCTTGTTGCTTCAAAGGATGTAATGTGTCAGACGTTAAAAAAACACTTCAGGTCCATCACGGTTTCTGCCCAGAATATGGGATTGGAGTGCTGATAGTAAGATCTCTCATAAAGATAAATTTGAATGGTTGTGTAATATTGCACGATTTGATAGAGGACATGGGTAAAGAAATTGTCCGACAAGAATCGCCAGAGGAGCCTGGAAAACGTAGTAGGTTATGGTTTCCTAATGACATAATTCATGTTTTCGAAGAAAATACTGGAACTAGTAGTATTCAAGTCATAATTCTGGATTTCCCCAATTTTGAAGAAGTGGTAGAATGGGATGGAAAGGCATTCAAGGAGATGAAAAACCTCAAAACTCTTATCATTAGAGTTGGTAGTTTTTCCAAAGGTCCCGAGCATCTTCCAAATAGTTTAAGAGTATTGGAATGGCGGGGATATCCATCACCATCTTTACCTTCCAACTTTCATCCAAAGAAACTTGTGATACTGAAGTTACCGCAAAGTCAGTTAATGTCCCTCAACTTGCTTATACCAAAGAAGCAGAAGTTTGTGAACATGAGAGTTTTGAATTTTGATGATTGTGAGTGTATAACAGAGATACCTGATGTGTCTGGTGCTCCAAATTTAGAAGAGTTATCATTTGGTGATTGCGCAAATTTAATTAAAATTCATGAATCAGTTGGATTCTTGAATAAGCTTAAAATTTTGAATGCTGATGGCTGTAGCCGGCTCAGGACTTTTCCACCCATCAAGTTGAGCTCCCTTGAAAAACTCAAGCTTTCATCTTGTTACTGTTTGAAGAGTTTTCCAGAAATATTAGGAAAGATGGAAAAGATTACAGTACTTGATTTACTAGCCACTCCGATAAAAGAACTTCCATTTTCCATTCACAATCTCACCCGGCTTGAAAGAGTAGTACTGATTGGCTGTGGAGTTGTTCGGTTACCAAGTAGTATTTTGGTGATGCAGGAACTTCATGAGTTGATTGCTGGGGAATGTACATTGTTATTACCACAACCGAACGATTTTGAACCTCTAGCTAGCTCAATGGTCTTCAATCTAGGTCTTTCTGGCTGCCACGTTTCAGACGATTTCCTTCGAATTGGTCTCCCTTTGTTTTCTAATGTGAAAGAGCTGTACCTGTCGCAGAATAATTTTACAATTCTTCCAGCATGCATCAAAGAATGTTACTTTCTAACTAAAATTCATTTGGATGGTTGCAAGAATCTCAAAGAAATTTGCGGGGTTCCACTAAACTTAGAAACATTATCTGCAAAATGTTGCACATCCTTGATAATTTTAGACCTCAAACTTCTTCCTGAATGCGCCAAAGTATGCCGCTTTTTGAGGACACTTATATTGGATAACTGTAAAAATCTTCAAACTATTAGAGGGGTTCCACCCAACATAAGGACTTTGTCTGCAAAAGACTGCCCTTCCTTGACTTCCGGGTGTAGAATCATGTTACAGAGTGAGAAACTGCATGCAGAGGGCGGGGACAAGAAGTTTCACTTACCAGGAAGATGTATTCCAGTGTGGTTCGAGCACTACGTCCATGATCATAATGCATCTATTACTTTCTGGTTTCGTAAAAAGATCCCTGCAATATCTCTATGTCTTGTTGTTCGACCCGGTTCATATGAAGAAATTATTCAGCCCAGATTTATCATCGATGGAAAAAGAAAAACAGATGGATTCGAGCTAAGTTTCGACGATGGTGACCATGGGCACAGTGGACTAGCAGATCATATAATAATTTTTGATATAAAACAGATAACATTCAAATTAACAGATGCTGTTCTTGAAAACGAATGGAATTGCGTGGTGTGTACGTCTAAGTAA 3177 0.3846 MASISSSSFTYGWKYDVFLSFRGQDTRHGFTGYLYKALIDSGIHTFIDDDELQRGEQIMPSLVKAIAETRIAIIVFSKNYAFSPFCLDELVIILALIKDKGRLVFPVFYDVDPSDVRHQRGSFKEALAKHEERFQNDKEKVQKWRTALCQAADLSGYHFKHGNENEYEFIEKIIKGVSGIINRIPLHIADYPVGLDSRVLKVTSLLNVGSDEVHMVGIHGIGGIGKTTIARALYNMIADQFEGLCFIDNVRENSVKHGLVHLQETLLYDIIGKKYMKLGSVNEGIPIIKHRLHLKKVLLVLDDVDKLEQLRAIVGETSWFGPGSRVIITTRDKHLLTSHGVEKTYEVDGLNMKEALELICWNAFKTEKFDSSYNSVLRRALSYASGLPLALEVMGSHLVGKSIKEWESAIDQFERIADEKIHNILKVSFDSLEEDQQKIFLDIACCFKGCNVSDVKKTLQVHHGFCPEYGIGVLIVRSLIKINLNGCVILHDLIEDMGKEIVRQESPEEPGKRSRLWFPNDIIHVFEENTGTSSIQVIILDFPNFEEVVEWDGKAFKEMKNLKTLIIRVGSFSKGPEHLPNSLRVLEWRGYPSPSLPSNFHPKKLVILKLPQSQLMSLNLLIPKKQKFVNMRVLNFDDCECITEIPDVSGAPNLEELSFGDCANLIKIHESVGFLNKLKILNADGCSRLRTFPPIKLSSLEKLKLSSCYCLKSFPEILGKMEKITVLDLLATPIKELPFSIHNLTRLERVVLIGCGVVRLPSSILVMQELHELIAGECTLLLPQPNDFEPLASSMVFNLGLSGCHVSDDFLRIGLPLFSNVKELYLSQNNFTILPACIKECYFLTKIHLDGCKNLKEICGVPLNLETLSAKCCTSLIILDLKLLPECAKVCRFLRTLILDNCKNLQTIRGVPPNIRTLSAKDCPSLTSGCRIMLQSEKLHAEGGDKKFHLPGRCIPVWFEHYVHDHNASITFWFRKKIPAISLCLVVRPGSYEEIIQPRFIIDGKRKTDGFELSFDDGDHGHSGLADHIIIFDIKQITFKLTDAVLENEWNCVVCTSK 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05295 1058 ProSiteProfiles TIR domain profile. 13 181 IPR000157 GO:0007165
Vivi2g05295 1058 PRINTS Disease resistance protein signature 215 230 - -
Vivi2g05295 1058 PRINTS Disease resistance protein signature 291 305 - -
Vivi2g05295 1058 PRINTS Disease resistance protein signature 695 711 - -
Vivi2g05295 1058 PRINTS Disease resistance protein signature 384 398 - -
Vivi2g05295 1058 Gene3D Ribonuclease Inhibitor 518 712 IPR032675 -
Vivi2g05295 1058 Pfam TIR domain 14 177 IPR000157 GO:0007165
Vivi2g05295 1058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 443 IPR027417 -
Vivi2g05295 1058 SUPERFAMILY L domain-like 505 908 - -
Vivi2g05295 1058 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 157 IPR035897 -
Vivi2g05295 1058 SMART till_3 14 154 IPR000157 GO:0007165
Vivi2g05295 1058 Coils Coil 127 147 - -
Vivi2g05295 1058 Gene3D - 11 182 IPR035897 -
Vivi2g05295 1058 Pfam NB-ARC domain 205 430 IPR002182 GO:0043531
Vivi2g05295 1058 SUPERFAMILY "Winged helix" DNA-binding domain 420 526 IPR036390 -
Vivi2g05295 1058 Gene3D Ribonuclease Inhibitor 713 936 IPR032675 -
Vivi2g05295 1058 Gene3D - 183 343 IPR027417 -
Vivi2g05295 1058 Gene3D - 349 433 IPR042197 -
Vivi2g05295 1058 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 901 IPR044974 GO:0006952
Vivi2g05295 1058 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05295 Vivi-Chr2 177147840 177154833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05295 9 786 WRKY Transcription Factor Family AT4G12020 29.787 3.01e-84 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05295 - - gmx:121173697 1214.13