Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05252 ATGGAAATGGAAATGGAAATGGAGATGAGATGCAAAGACCAAGACATAGAGATAGCCACAGACATAACACCACCACTCACCCCACTCTCTTTCTCTCTCCACAATACCAATCTCCACACTCACTGCTCCTCATGTTTCTCTCTCATCACAACTCCTATTCCCAATTCCATTCCTCCACTCTACTGCTCTCCTCACTGCACCGCCGCCCATTCCTCCATCCACCTCTCCTCCGCCGAACACCACCTACCTCCCTCCACCACCTCCTCCCTCCTCCGCACCGCCCTCCGCCTCCTCCTCATCTCCCACCACCACACTCCTCCGTCCCCTCGCCTCAACCGTTTACTAACTAACCGTCATTTGCTGACGTGTCACAACGACGAAATCTCCGAAACTATTCGTATCAACGCCCTTGCAATGGCCACCGCAATAGCGAAGCAAAGAAGCGGCGGCGGATTGATAGAATCATCCGACGAGGGCACCGTTTTGGAGGAAGCTACTCTTGCTCTCTGTGCGGTGCTAACGAACGCGGTGGAGGTGCACGATAACGAAGGTTGCGCGTTAGGGATTGCGGTTTTCGAACCTGCTTTCTCTTGGATTAATCATAGTTGTTCACCCAATGCATGCTACCGCTTCTCTTTCGAATCTTCTTCTTTGCTTTCTCAGGAATCAGAACTTCGCATAGCTCCATTCACTCATGATTCTCAGCAACCAAAAATGGATTGTAGGATTTTTGGTAGAAGTGAAGGGAAGAATGTTTGTGGTCCAAGATTGATTGTGAGAAGTATCAAGAGAATTAAAATGGGGGAAGAGGTTACTGTAGCATATACTGACCTCTTGCAGCCAAAGGCATTGCGACAATCAGAACTATGGTCAAAGTATCGGTTTATTTGTTGCTGCAAACGATGTAGTTCTTTGCCCTTCACATATGTGGATCATTCATTGCAAGAAATATCCGTCTCATGCCGAGATTCATCTGGTCTGCGTTCCGATTACAAGCTCTTCAGAGACATGGCTGATAGAAGATTGACTGATAACATTGAAGATGTTATATCAGAGTACCTTTCAGTCGGTGATTCTGCGTCTTGTTGTGAGAAGCTTGAGAAGATTCTTATTCAAGGTCTGGACGAGGAGCTAGAAACAAATGAAGGAAAATCACATTCTAAACTCACACTGCACCCCCTTCATCACCTCTCTCTAAATTCCTATACAACACTAACTTCTGCATATAAAGTCCGCGCTAGTGATTTATTATCCGACGATTCCGAAACAGATCTTAATCAAACAGAAGCTTTTGATATGAGCAGAACTAGTGCTGCATATTCTTTGTTCCTGGCAGGTGCAACTCACCATCTCTTCAACTCTGAATCATCACTTATTGCATCTGTTGCTAATTTTTGGATAGGAGCTGGTGAATCTTTGTTAACTCTTACCACAAGTTCAGGATGGAGTAGGGTTGTTAATTTCAACACAAAATTCGAATGCTCTAAGTGTTCATTAATGAATAGATTTAGAGCCTCTATGTTAAATGGTCAAATCAGAAGTGAAGATTTCGAGATTGTATCAAATGAGTTTATTCATTGTGTCTCAGACATTACTCATAAAGTTTGGAGTTTCCTTGCCCATGGTTGTGATTTCTTGAAGTCGTGTAAAGACCCTATTAATTTCAGCTGGCTAATGTCTACCGAAAATTCAGAGGATGTTGCGGCTCATGATATCGAAAATGACAATGAATCTGGGAATAGCGTCGGTGTTTGTGACGATCAAGCTTACAATAATCAGAGAGTCGCATATATTTTTCAGCTTGGTGGACACTGCTTAACATATGGAGGATTATTGGCTTGTATATGTTATGGTCCTCATTCCCATTTGGTTTCTCATGTACAGAATATTCTAGCTCATGAAAACGATTCATTATTTTCACAAAGTTTTGGAGATATGTATGACAGCTTATGA 1953 0.4322 MEMEMEMEMRCKDQDIEIATDITPPLTPLSFSLHNTNLHTHCSSCFSLITTPIPNSIPPLYCSPHCTAAHSSIHLSSAEHHLPPSTTSSLLRTALRLLLISHHHTPPSPRLNRLLTNRHLLTCHNDEISETIRINALAMATAIAKQRSGGGLIESSDEGTVLEEATLALCAVLTNAVEVHDNEGCALGIAVFEPAFSWINHSCSPNACYRFSFESSSLLSQESELRIAPFTHDSQQPKMDCRIFGRSEGKNVCGPRLIVRSIKRIKMGEEVTVAYTDLLQPKALRQSELWSKYRFICCCKRCSSLPFTYVDHSLQEISVSCRDSSGLRSDYKLFRDMADRRLTDNIEDVISEYLSVGDSASCCEKLEKILIQGLDEELETNEGKSHSKLTLHPLHHLSLNSYTTLTSAYKVRASDLLSDDSETDLNQTEAFDMSRTSAAYSLFLAGATHHLFNSESSLIASVANFWIGAGESLLTLTTSSGWSRVVNFNTKFECSKCSLMNRFRASMLNGQIRSEDFEIVSNEFIHCVSDITHKVWSFLAHGCDFLKSCKDPINFSWLMSTENSEDVAAHDIENDNESGNSVGVCDDQAYNNQRVAYIFQLGGHCLTYGGLLACICYGPHSHLVSHVQNILAHENDSLFSQSFGDMYDSL 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05252 650 PANTHER PROTEIN SET DOMAIN GROUP 41 7 636 - -
Vivi2g05252 650 SUPERFAMILY SET domain 172 304 IPR046341 -
Vivi2g05252 650 Gene3D SET domain 140 305 IPR046341 -
Vivi2g05252 650 CDD SET_SMYD 160 302 - -
Vivi2g05252 650 Pfam SET domain 193 275 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05252 Vivi-Chr2 175771365 175781967 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi2g05252 SET 8.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05252 - - aprc:113867790 741.88