Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05241 ATGACCTTGTATATTACATTGTTTGTAGCCATTCTCTTCATCGTGCTCTACAATATATGGAGAGGCAACAGAAATGTGCCTCCAAATTGGCCAATAATGGGCATGTTACCATCTGTTTTTCACAACAAATCCAATATTCATGATTTTGTAACCTCAGGAATGAAATATTATGGAGGTACTTTGCATTTCAAAGGACCTTGGTTCACAAACATTGCCAACTTTATCCTCACCAGTGATCCCATGAATGTGCACCACATCACTAGCAAGAATTTCAGCAACTATGGAAAAGGATCTGATTTCCATGAGATCTTTGAAATTCTTGGTGTTAGTATTATAAACTTGGATGGAAATGCATGGAAACAAGAGAGGGCAGTACTTCATTCATTGCTTAAAAGCAAAAGTTTTGAGACATCCCTTCAACAAAACATTCACAAGAAGCTAGAGAATTGCATGCTACCATTTCTTGATCATCATGCATCAAAAGGTGCACAGGTACTTGATTTACAAAACATTCTTGAGAGGTTCACCTTTGATATTACTTGTACTTTTTTATTTGGATTTGATCCTAATTGCCTTCCTTACAAGTTCAATGATGAGTTGTTAGACACTTCTTTTGTAAAAGCTATTTATATGCTTGAGGATATGGTGTTATCAAGACAATATATTCCAAAATGCTTTTGGAAGCTACAAAAATGGCTACATATTGGTCAAGAGAAGAAGAACAAAGCAGCTCAAGAAATTCTTCACCAATTCTTGTCTAAATGTATAGCTTATTCCAAAGGTGTTGATGAAAGTCATTCTTGCTTGCTAAAGGAACTAATGAAAGAAAAAAAGGCTGACAATGAGAAGTATATTAGAGACACTGCAGTGAGTCTCTTGGGTGCTGGAAATGGAACAATAAGTTCAGGTCTAAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTATTGTGGAAACAAAAATCATTCAAGAAATCAAAGATTATTGTCATGCAAATGATGATGATTTGATGACTAGTTTAGGTGTTGAAAAGCTTAATAAGCTAGTTTATCTTCATGGAGCTATTTGTGAAGCTTTGAGGCTTTATCCACCTATTCCATTTGAACACAAATGTGCAATAAAATCTGATATATTGCCTAGTGGAGACTATGTTAGTCCAAATACAAAGTTGATATATTCTTTGTATGCAATGGGAAGGATGGAGAAAATATGGGGAAGTGATTGCTTGGAGTTCAAGCCAGAGAGGTGGATATCGAGTCGAGGAGGTATTGCTTATGTGCCATCTTACAAGTTCATAGTGTTTAATGCAGGTCCAAGAAGTTGTTTGGGAAAAGATATTACCTTTGTTCAAATGAAAATGGTTGCAGCTGCTGTGTTATGGAAGTTTCATATAGAGGCTGTGGAAGGTCACACTATTGCTCCTAGGGTTTCTATGATTCTACGTATGAAGCATGGACTTAAGGTCAAAGTTAGTAAAAGATGCATTTGA 1488 0.3602 MTLYITLFVAILFIVLYNIWRGNRNVPPNWPIMGMLPSVFHNKSNIHDFVTSGMKYYGGTLHFKGPWFTNIANFILTSDPMNVHHITSKNFSNYGKGSDFHEIFEILGVSIINLDGNAWKQERAVLHSLLKSKSFETSLQQNIHKKLENCMLPFLDHHASKGAQVLDLQNILERFTFDITCTFLFGFDPNCLPYKFNDELLDTSFVKAIYMLEDMVLSRQYIPKCFWKLQKWLHIGQEKKNKAAQEILHQFLSKCIAYSKGVDESHSCLLKELMKEKKADNEKYIRDTAVSLLGAGNGTISSGLSWFFWLVSTHPIVETKIIQEIKDYCHANDDDLMTSLGVEKLNKLVYLHGAICEALRLYPPIPFEHKCAIKSDILPSGDYVSPNTKLIYSLYAMGRMEKIWGSDCLEFKPERWISSRGGIAYVPSYKFIVFNAGPRSCLGKDITFVQMKMVAAAVLWKFHIEAVEGHTIAPRVSMILRMKHGLKVKVSKRCI 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05241 495 CDD CYP86A 63 486 - -
Vivi2g05241 495 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05241 495 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05241 495 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05241 495 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05241 495 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05241 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vivi2g05241 495 PANTHER CYTOCHROME P450 15 488 - -
Vivi2g05241 495 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05241 495 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05241 495 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05241 495 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05241 495 SUPERFAMILY Cytochrome P450 27 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05241 495 Pfam Cytochrome P450 27 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05241 495 Gene3D Cytochrome P450 23 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05241 Vivi-Chr2 175677236 175678997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05241 7 493 Cytochrome P450 AT2G23180 41.700 4.19e-140 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05241 - - cam:101494575 646.736