Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05221 ATGGAAGGGAATTTATCACAGGGAGGTATAATTCAAGGTGGTGGTAGTGGTTCTTTTGGTTTGCCGGGATCGATGCGAGTTCATCGTCAAGCGCCGATGAACCAACATCAAACTCATCCTTGTCAAGGTTCCGCGGTGCATTCGTCGATTCGTGAAGGTTTTCCTCTTACAATGGGGACATTGCAGAACTGTGATCAGAAGATAGGGATGAATGAGTTTGGTCAGGGGGATAGAAACAAAAACTCGGCAAGTGAGGAGGATGAGCCGGAGGAAGGTGGTGAGGGTCATCAGCAAGAGGGGGCGAGAGGGAAAAAGGGGTCGCCTTGGCAGCGTGTGAAGTGGACTGATAAGATGGTGAGGCTTTTGATAACAGCGGTTTCTTATATTGGCGAGGATGGGACTTCAGAAGGTGGTGGTGGAGGAAGGAGGAAATTCGCGGTTTTGCAGAAAAAAGGTAAGTGGAAATCTATTTCTAAGGTTATGGCTGAAAGAGGTTATCGTGTTTCGCCTCAGCAATGCGAGGATAAGTTTAACGATCTTAATAAAAGGTACAAAAGGCTTAATGATATGCTTGGAAGAGGAACTTCTTGTCAAGTTGTTGAAAATCCCGCTTTGTTGGATGTTATCGATTTTCTTAACGAGAAAGAAAAAGACGACGTTAGAAAAATATTAAACTCGAAACAACTCTTCTATGAAGAGATGTGTTCTTATCATAATTGTAATAGATTGCATTTGCCGCATGATCCCGCATTGCAACGGTCCTTGCAGATAGCTCTCAGAAATAGAGATGATCATGATAACGATGATGTGAGAAGGTCCTATCATGACGACCACGACGAGGATAGTCACGATATGGAAACTGATGATCATGATGAGTTCGAAGAGAATTACGCTTCACATTGTGATAGTCAAGGAATCTTCGGAGGATTGGGAGGATCTACGAAAAGACTAAGACAAGGCCAAGGTCAAGGTCAAGAAGACGCTACTACTTTCGGGAACTCTTTAAATTGTCAGGAGTATAACAAAAGTTTGTATCCTCTTGGACACATCGCGCAACCTGACGGAAACCAAGCTTTACCCGAAAATATGAGAGCAGCTTTGTTACAGAAGCAATGGATTGAATCTCGTTCGGTTCAGTTGGAAGAACAGAAGCTACAAATTCAGGTTGAGATGATGGAATTAGAGAAAGAAAGATTCAAGTGGCAGAAGTTTAGCAAGAAAAAAGACCGAGAGTTGGAGTTGTTCAAGCTGGAGAATGAAAGGATGAAGATTGAGAATGAACGTATTGCTTTAGAGCTAAAACGGAAGGAGATCGGCAGCACCAGCTTTAACTAG 1335 0.4315 MEGNLSQGGIIQGGGSGSFGLPGSMRVHRQAPMNQHQTHPCQGSAVHSSIREGFPLTMGTLQNCDQKIGMNEFGQGDRNKNSASEEDEPEEGGEGHQQEGARGKKGSPWQRVKWTDKMVRLLITAVSYIGEDGTSEGGGGGRRKFAVLQKKGKWKSISKVMAERGYRVSPQQCEDKFNDLNKRYKRLNDMLGRGTSCQVVENPALLDVIDFLNEKEKDDVRKILNSKQLFYEEMCSYHNCNRLHLPHDPALQRSLQIALRNRDDHDNDDVRRSYHDDHDEDSHDMETDDHDEFEENYASHCDSQGIFGGLGGSTKRLRQGQGQGQEDATTFGNSLNCQEYNKSLYPLGHIAQPDGNQALPENMRAALLQKQWIESRSVQLEEQKLQIQVEMMELEKERFKWQKFSKKKDRELELFKLENERMKIENERIALELKRKEIGSTSFN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05221 444 Coils Coil 407 437 - -
Vivi2g05221 444 PANTHER F16F4.11 PROTEIN-RELATED 1 439 - -
Vivi2g05221 444 MobiDBLite consensus disorder prediction 69 110 - -
Vivi2g05221 444 Coils Coil 377 397 - -
Vivi2g05221 444 MobiDBLite consensus disorder prediction 262 281 - -
Vivi2g05221 444 Pfam Myb/SANT-like DNA-binding domain 111 237 IPR044822 -
Vivi2g05221 444 MobiDBLite consensus disorder prediction 1 25 - -
Vivi2g05221 444 MobiDBLite consensus disorder prediction 262 290 - -
Vivi2g05221 444 Gene3D - 114 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05221 Vivi-Chr2 175295781 175297771 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi2g05221 Myb_DNA-bind_4 1.3e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05221 - - gmx:100812134 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05221 2 175295781 175297771 Vivi2g05221 2 175295781 175297771 ECH
Vivi2g05221 2 175295781 175297771 Vivi1g04514 1 96355729 96358453 PCT