Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05218 ATGGCATCACTCACCAACAACCAAGCCAAATTTGATCTTGAACAACAATCATCAACAATAACAACACTAGAAGTTGAAACAAAAGATTTTGACTACTCAAAAAGATCACAATGGCTCCGCGCCGCAGTTTTAGGCGCTAACGATGGATTAGTCTCTACAGCTTCGCTGATGATGGGAGTCGGGGCAGTCAAACAAGATATCAAAGCTATGATCTTAACCGGTTTTGCCGGGTTGGTAGCTGGTGCATGCAGCATGGCTATAGGCGAGTTTGTTTCGGTTTACTCGCAATTGGATATTGAAGTTGCTCAAATGAAAAGAGAGAAAGAGAGAGGAAGAGGAGTTGGTGATGGTGAAGAGAAGGAAAGTTTGCCTAATCCTTTGCAAGCAGCAGCTGCTTCAGCTTTAGCTTTTTCTATTGGTGCAATGGTGCCATTGCTTGCAGCTTTTTTTATAAGTGATTATAAGGTGAGACTTGGTGTTGTTGTGGCTGCAGTTAGTTTTGCTTTGGTTGTTTTTGGTTGGTTTGGAGCTGTGTTGGGTAAGGCTCCAATTTTTAGGTCTATTTTGAGGGTTTTGATTGGTGGTTGGGTTGCTATGTCCATTACCTTTGGGCTTACCAAGTTAATCGGGACAAGTGGTCTTTAG 645 0.4264 MASLTNNQAKFDLEQQSSTITTLEVETKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKERGRGVGDGEEKESLPNPLQAAAASALAFSIGAMVPLLAAFFISDYKVRLGVVVAAVSFALVVFGWFGAVLGKAPIFRSILRVLIGGWVAMSITFGLTKLIGTSGL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05218 214 Pfam VIT family 120 206 IPR008217 GO:0005384|GO:0030026
Vivi2g05218 214 Pfam VIT family 39 111 IPR008217 GO:0005384|GO:0030026
Vivi2g05218 214 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 18 209 IPR008217 GO:0005384|GO:0030026
Vivi2g05218 214 CDD Nodulin-21 37 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05218 Vivi-Chr2 175223510 175224628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05218 5 214 Nodulin-like Gene Family AT3G43660 68.095 1.58e-101 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05218 K22736 - qsa:O6P43_004197 321.242