Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05215 ATGGAGTTGGTTATTATGTTAGTTTCTTTGATCCTTTCATTGGTAGTGTTACCAATTCTGTGGATGATGTATAAGACTCGTTCTCCTAAAGAAATGGAAGGTATACCTGGAAATCTAGGGTGGCCTATTGTTGGTGAGAGTTTCTCATTCATTTCTGATTTTTCAAGTCCTTCTGGAATCTTTAGCTTCATGAGCAAGAGACAAAAGAGATATGGAACAGTTTTCAAGAGCTTTGTCTTAGGGAGATTCATAGTCTTCATGACTGGGAGAGAAGCAAGCAAGATACTATTAACTGGAAAAGATGGGATTGTGAGTTTGAACTTATTTTACACCGGCCAACAAGTTCTTGGCCCCACTAGCTTGCTTCAAACCACTGGTGAAGCACACAAAAGGCTTAGAAGACTAATTGCTGAGCCTCTATCATTAGATGGTTTGAAAAAATATTTCCATTTTATTAATGCTCAAGCAATGGTTACATTAGATCAATGGGAAGGAAAGAAGGTTCATGTTCTTGAAGAAGCTTCTACATTTACATTGAAAGTGATTGGACACATGATCATGAGCTTAGAGCCTACCGGAGAGGAACAAGAAAAGTTTAGGTCAAATTTCAAGATCATTTCTTCCTCATTTTCTTCATTGCCTTTTAAACTTCCTGGGACAGCTTTTTATCGCGGTATCAAGGCGCGCGATAGGATGTACGAAATGTTGGATTCCGTAATTTCGCGGAGGAGAAACGGCCAAGATTTCCAACAAGATTTCTTAGAGTCCTTGATTATGAAACATAGCAGAAAATCAGATGCACAAGATGAAAATAAACTTACTGATAAGCAATTAAAAGACAATGTATTAACTCTGCTTGTTGCAGGACATGATACCACAACTGCTGCTCTTACATGGCTTATCAAATTTCTTGAAGAAAATCCAAATGTTCTAGAACAACTTAGAGAGGAACATAGAGAAATTATTGCAAACAGAAAAAGTGGAACAGATCTCACATGGTTAGAAGTTAATAACATGCCTTACACAGCGAAAGTGATTAGTGAAACACTCAGAAGAGCCACAATACTACCTTGGTTTTCAAGAAAAGCATCTCAAGATTTTGAAATTGATGGATTCAAAGTAAAGAAAGGATGGTCTTTGAACCTGGATGTTGTTTCAATACATCATGACCCTAAAGTTTTTCCAGATCCTTACAAGTTTGATCCATCTAGATTTGATGAACACTTGAGGCCATTCAGCTTTCTTGGATTTGGCAATGGACCACGAATGTGTCCAGGAATGAATCTTGCTAAGGTTGAAATTTGTGTCTTCATTCATCACCTTGTCACTAGATACAAATGGAGAGCTCTGGAGAAAGATGATTCTGTCCAACCAACACTTGTGAGGATGCCAAAGAATAAGTATCCAATTATAGTTGAGTCACTATAA 1428 0.3754 MELVIMLVSLILSLVVLPILWMMYKTRSPKEMEGIPGNLGWPIVGESFSFISDFSSPSGIFSFMSKRQKRYGTVFKSFVLGRFIVFMTGREASKILLTGKDGIVSLNLFYTGQQVLGPTSLLQTTGEAHKRLRRLIAEPLSLDGLKKYFHFINAQAMVTLDQWEGKKVHVLEEASTFTLKVIGHMIMSLEPTGEEQEKFRSNFKIISSSFSSLPFKLPGTAFYRGIKARDRMYEMLDSVISRRRNGQDFQQDFLESLIMKHSRKSDAQDENKLTDKQLKDNVLTLLVAGHDTTTAALTWLIKFLEENPNVLEQLREEHREIIANRKSGTDLTWLEVNNMPYTAKVISETLRRATILPWFSRKASQDFEIDGFKVKKGWSLNLDVVSIHHDPKVFPDPYKFDPSRFDEHLRPFSFLGFGNGPRMCPGMNLAKVEICVFIHHLVTRYKWRALEKDDSVQPTLVRMPKNKYPIIVESL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05215 475 SUPERFAMILY Cytochrome P450 30 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05215 475 FunFam Cytochrome P450 family 722 subfamily A polypeptide 1 25 475 - -
Vivi2g05215 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Vivi2g05215 475 Gene3D Cytochrome P450 24 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05215 475 PANTHER CYTOCHROME P450 26 32 455 - -
Vivi2g05215 475 Pfam Cytochrome P450 36 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05215 475 CDD CYP90-like 67 473 - -
Vivi2g05215 475 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05215 475 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05215 475 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05215 475 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05215 475 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05215 475 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05215 475 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05215 475 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05215 475 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05215 475 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05215 475 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05215 Vivi-Chr2 175179509 175183755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05215 3 455 Cytochrome P450 AT5G45340 34.792 4.33e-95 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05215 - - gmx:100803766 816.224