Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g05185 | ATGAAAGATTTTTGGAACATGATCTGTGATGGTTCTGCTTGTTTTTCTTCGCATGGAGGAAAACATTATTGTTTCGCTTTTGAGGTTCTGAATGATCCTTCCTCATGCACCAACCATTTGTTTATCATTTTCCTTGATCTGTTGTTGCTAATAATGCTGTCATTTATGATGATTCAAAAGTGTTTGTTGAGGCCTATTCAAGGTCAGAATAGGGTGGAAAGGCATTCAAAGTTGCAGCTAGTTTCTGCAATAACCAATGGCTCTATTGGTTTGTTGCATTTTTGCTTAGGAATTTGGATTTTAGAGGAGAATTTAAGGAAAAATCTCACTGTTTTTTTTCTTAGTTTATGGATGCTAGAACTTGTTCAAGGATGCATATGGATGGTAGTTGCTTTGACTACAAGTCTTGTGTTGAAACAACTTCCAAGCACATGGATTTGGTTATTTTCAATACTTATATTCTTTGTTTCTAGTGTTTTATGTGCTTTGTCCTTATCTTATGCATTTAGCAGCAAAGAGTTGTCCCTTAAGGTTGCTTTAGATGTTCTATCTGTTTTGGGATCATTTTTGCTGCTTTTTTTCACATACAAAGCATGTAAGTATGAAAACATTGACAAGGAAGTTAATGGAAGTCTATATGCATCTTTAAATAGTGAGGTCCATGATGTTGATCGTGATAGCCCGATAGGCGTAACACCCTATGCCGATGCTGGACTTTTTAGTAGAATGTCGTTTTGGTGGTTGAATCCATTGATGAAAAAGGGTCAAGAGAAAACACTTGAGGACGAGGACATTCCTAAATTGCGAGAGTCAGATAGAGTAGAAGTGTGTTATTCGTTATTTACGGATCTGTTGAATAGTCAAAATCAAAAAGACGTGTCATCTCGATCATCGTTGTTGTGGACAATCGTTCTGTGTCATCAGAGAGAGATTTTGATATCGGGATTCTTTGCGTTTGTCAAGGTACTCACTTTATCTTCTTGTCCTCTACTTTTGAATGCCTTTGTATTGGTGGTTGAAGGTAATAGAAGTTTCAAATATGAAGGTCACTTATTGGCTATCACTCTTTTGTTTACAAAGATTTTAGAGTCCTTATCCCAGAGGCAATGGTATTTTCATTCTAGAGTCATTGGTATGAAAGTTAGGTCATTAATTACAGCAACAATTTACAAGAAACAACTGAGATTATCCAATACTGCTAGATTGATTCACTCGAGTGGCGAGATAATGAATTATGTGAATGTGGATGCTTATAGAATCGGAGAGTTTCCGTTTTGGTTTCACCAGACATGGACAATCGTTCTTCAGATATGTATTACTTTAGTCATCCTTTTCCGTGCAATTGGACTCGCGACAATTGCAACATTGGTGACGATAATTTTGACTGTGCTTTTAAACACTCCACTAGCAAAGCTACAACATAAGTTCCTAACCGAACTTCTTGTGGCCAAAGATGAAAGGTTGAAGGCGAATTCTGAGGCTCTAGTGAATGTTAAAGTGTTGAAGTTATATGCATGGGAAATCCATTTCAAAAATGCTATCGAAAACTTAAGAAATGTTGAACTAAAATGGTTATCTTCAGTTCTATTACAAAAGGCATATAGTAATATTCTCTTTTGGTTATCACCTATTTTGGTCTCTGCTGCTACCTTTATGGCATGTTACTTCTTGAAAGTTCCTTTACATGCAAATAATGTTTTCACATTCATCGCAACTGTGCGCCTTGTGCAAGAGCCTATTTCAACCATTGCAGAGGTTATTGGAGCGATCATTCAAGCAAAGATAGCTTTTTCTCGAGTTGTTAAATTTCTCGAGGCACCTGAGCTACAGACTACAACTGTTAGAAAAAATTGTTATGATGAGAAGTTGAAGGGCTCAATTGTAATCAAGTCTGCGAATTTTTCATGGGAAGATGATATATCGAAAACAACGATAAGAAACATAAATTTAAATGTTAGTCCTGGACAAAAAATAGCTATTTGTGGAGAAGTTGGCTCCGGAAAATCAACTTTATTAGCAGCTATTCTTGGTGAACTCCCTAACACTAAGGGGCAAATCGAAGTTTATGGAAAGGTTGCTTATGTTTCTCAAACAGCATGGATACAATCAGGAACAATACAGGAAAATATTTTGTTTGGATTACCTTTTGATTCTCAAAGGTATCAAGAATCACTTCATAGGTCTTCATTGATGAAGGATCTTGATTTGTTTGCGCGTGGTGATCTAACCGAGATAGGAGAGAGAGGTGTTAATCTAAGTGGAGGTCAGAAGCAGCGAATTCAACTTGCTCGAGCTCTTTATCAGAATGCAGATGTATATCTCTTAGACGATCCTTTCAGTGCTGTTGATGCGCACACTGCAAAAAAATTGTTCAGTGAATATATATTGGAAGGACTTACCGGAAAGACAGTCCTTCTCGTGACTCATCAAGTCGACTTTTTCCCTGCATGTGATTCTATTTTGTTGATGTCGGATGGAAATATACAATATGCTTCTAATTATCATGATCTATTGACCTTAAGCGAAGAATTTAAGGATCTGGTTAATGCACACAAAACGAAAGGTGGTTCTTCCCGGCTTGCAGATGTTACTTTAACTTCAATACATTCAAAGTCTAGTAAAGAGAAGATACAAGAATTTTCAGAGCAGTCGATTGATGTTATAAATGGTGATCGGTTAATTAAGCAAGAAGAAAGAGAAAAAGGAGACACGGGGTTGAAGCCTTACTTACAATATCTCAATAAAAAAAGAGGTTACATATACTTCCTTGCCACTGGTCTTTCTCACCTGATGTTTGTAATTTGCCAAATATTACAATACTCCTGGATGGCTGCTAGTGTTGACAATCCTCATGTCAGCGAATTGAAATTGCTTGGAGTTTACTTGTTGATTGCGTTTAGTTCTACAATGTTCGTTATAATTAGAAGTCTACTTGCAGTTGCATTGGGTTTTCAATCATCAAAAGTTTTATTTAGACAGTTAATAAATTCTCTTTTTCGTGCATCGATGTCTTTCTATGACTCTACGCCGTTGGGAAGGATACTTAGTAGGGTTTCATCAGATCTGAGTATCGTGGATCTTGATATCGCTTTTAGCCTCTCCAGTGGGGTAGCATCCACTATATCTTATTATGCAGGGCTAATAGTCTTAACATCCATCGCTTGGCAAGTCGTGTTTTTGTGTATACCAATGGCCTATGTTATTATTCGTATACAAAGACACTACTATGCATGTGCAAAAGAACTTATGCGGATGAATGGCACAACAAAGTCCTCAGTAGCTAACCATGTAGCTGAAACTGTTGCTGGAGTTATGACAATCCGAGCTTTTGAGGACGAAGAACGCTTTTTCAACAAGAATCTTGATTTAATTGATCTCAATGCTGGTGCTTTCTTCCACAGTTTTGTCTCAAACGAGTGGTTTATCCAACGGTTAGAAACAATCTACGCAGTCGTTCTTGCCTCTGCAACACTTTGCATTTCTATGCTTCCTCTAGGGACTTTAACTCCTGGTTTTGTCGGTATGGTACTTTCTTATGGCCTTTCGTTAAACAGTGTCTTAGTATATTCCATTCAATGCCAATGCACTCTAGCAAATTATATAGTATCTGTTGAGAGGATAAGTCAATACACCGATATACCAAGAGACGCCCAAGAAATGGTAGACGGAAATCATCCTCCACCTAATTGGCCAGTTGTAGGAAAAGTAGAAATAAAAGATTTGAAGATACGATACAGGCCTAACGGACCACTTATATTGCATGGTATCACATGCACATTTGAAGGAGGGCGCAAGATTGGTATTGTCGGTAGAACGGGAAGTGGAAAATCTACTCTTATAGGTGCATTGTTTCGTCTTGTGGAGTCGGCAGGAGGGAAAATTTTAGTTGATGGAATAGACATATCATCTATTAGGCTTCATGACTTGAGGTCAAGTTTTGGTATTATACCTCAAGATCCTACCCTTTTCATTGGGACTGTTAGATATAACTTGGATCCTTTATCTCAACATTCTGATCAAGAAATATGGGAGGTTCTTCAAAAGTGCCAATTGCAAGAGTCTGTCAAAGATAAAGGTGGTTTAGATTCCTCAGTTGTTGAAGACGGGTCAAATTGGAGCATTGGACAGAGGCAACTATTTTGTTTGGGACGTGCTCTTTTAAAGAGAAGTAGGATATTGGTGCTAGACGAAGCGACTGCATCAATTGATAATGCAACTGATTTGATTCTTCAGAATACCATTAGGACAGAGTTTGCAAATTGTACTGTGATAACAGTAGCACATAGGATACCAACTGTGATGGATTGCAACATGGTTCTTGCCATAAGTGATGGAAAATTGGTTGAGTATGATGAGCCATTAAAGTTGATAAACAGAGAAAGATCAATGTTTGGAAACCTTGTAAAAGAATACTGGTCTCATTTTCAATCAGCAGAATCACATTGA | 4446 | 0.3754 | MKDFWNMICDGSACFSSHGGKHYCFAFEVLNDPSSCTNHLFIIFLDLLLLIMLSFMMIQKCLLRPIQGQNRVERHSKLQLVSAITNGSIGLLHFCLGIWILEENLRKNLTVFFLSLWMLELVQGCIWMVVALTTSLVLKQLPSTWIWLFSILIFFVSSVLCALSLSYAFSSKELSLKVALDVLSVLGSFLLLFFTYKACKYENIDKEVNGSLYASLNSEVHDVDRDSPIGVTPYADAGLFSRMSFWWLNPLMKKGQEKTLEDEDIPKLRESDRVEVCYSLFTDLLNSQNQKDVSSRSSLLWTIVLCHQREILISGFFAFVKVLTLSSCPLLLNAFVLVVEGNRSFKYEGHLLAITLLFTKILESLSQRQWYFHSRVIGMKVRSLITATIYKKQLRLSNTARLIHSSGEIMNYVNVDAYRIGEFPFWFHQTWTIVLQICITLVILFRAIGLATIATLVTIILTVLLNTPLAKLQHKFLTELLVAKDERLKANSEALVNVKVLKLYAWEIHFKNAIENLRNVELKWLSSVLLQKAYSNILFWLSPILVSAATFMACYFLKVPLHANNVFTFIATVRLVQEPISTIAEVIGAIIQAKIAFSRVVKFLEAPELQTTTVRKNCYDEKLKGSIVIKSANFSWEDDISKTTIRNINLNVSPGQKIAICGEVGSGKSTLLAAILGELPNTKGQIEVYGKVAYVSQTAWIQSGTIQENILFGLPFDSQRYQESLHRSSLMKDLDLFARGDLTEIGERGVNLSGGQKQRIQLARALYQNADVYLLDDPFSAVDAHTAKKLFSEYILEGLTGKTVLLVTHQVDFFPACDSILLMSDGNIQYASNYHDLLTLSEEFKDLVNAHKTKGGSSRLADVTLTSIHSKSSKEKIQEFSEQSIDVINGDRLIKQEEREKGDTGLKPYLQYLNKKRGYIYFLATGLSHLMFVICQILQYSWMAASVDNPHVSELKLLGVYLLIAFSSTMFVIIRSLLAVALGFQSSKVLFRQLINSLFRASMSFYDSTPLGRILSRVSSDLSIVDLDIAFSLSSGVASTISYYAGLIVLTSIAWQVVFLCIPMAYVIIRIQRHYYACAKELMRMNGTTKSSVANHVAETVAGVMTIRAFEDEERFFNKNLDLIDLNAGAFFHSFVSNEWFIQRLETIYAVVLASATLCISMLPLGTLTPGFVGMVLSYGLSLNSVLVYSIQCQCTLANYIVSVERISQYTDIPRDAQEMVDGNHPPPNWPVVGKVEIKDLKIRYRPNGPLILHGITCTFEGGRKIGIVGRTGSGKSTLIGALFRLVESAGGKILVDGIDISSIRLHDLRSSFGIIPQDPTLFIGTVRYNLDPLSQHSDQEIWEVLQKCQLQESVKDKGGLDSSVVEDGSNWSIGQRQLFCLGRALLKRSRILVLDEATASIDNATDLILQNTIRTEFANCTVITVAHRIPTVMDCNMVLAISDGKLVEYDEPLKLINRERSMFGNLVKEYWSHFQSAESH | 1481 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g05185 | 1481 | FunFam | ABC transporter C family member 5 | 886 | 1217 | - | - | |
Vivi2g05185 | 1481 | FunFam | ABC transporter C family member 5 | 614 | 857 | - | - | |
Vivi2g05185 | 1481 | CDD | ABC_6TM_ABCC_D1 | 313 | 600 | IPR044746 | GO:0140359 | |
Vivi2g05185 | 1481 | Gene3D | - | 1220 | 1470 | IPR027417 | - | |
Vivi2g05185 | 1481 | Gene3D | - | 622 | 856 | IPR027417 | - | |
Vivi2g05185 | 1481 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1236 | 1469 | IPR003439 | GO:0005524 | |
Vivi2g05185 | 1481 | SUPERFAMILY | ABC transporter transmembrane region | 908 | 1216 | IPR036640 | GO:0005524|GO:0016020 | |
Vivi2g05185 | 1481 | CDD | ABCC_MRP_domain2 | 1234 | 1453 | - | - | |
Vivi2g05185 | 1481 | FunFam | ABC transporter C family member 3 | 1219 | 1470 | - | - | |
Vivi2g05185 | 1481 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 235 | 1469 | - | - | |
Vivi2g05185 | 1481 | ProSitePatterns | ABC transporters family signature. | 752 | 766 | IPR017871 | GO:0005524|GO:0016887 | |
Vivi2g05185 | 1481 | CDD | ABC_6TM_ABCC_D2 | 918 | 1211 | IPR044726 | GO:0140359 | |
Vivi2g05185 | 1481 | CDD | ABCC_MRP_domain1 | 627 | 826 | - | - | |
Vivi2g05185 | 1481 | SMART | AAA_5 | 654 | 835 | IPR003593 | GO:0016887 | |
Vivi2g05185 | 1481 | SMART | AAA_5 | 1262 | 1453 | IPR003593 | GO:0016887 | |
Vivi2g05185 | 1481 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 930 | 1199 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vivi2g05185 | 1481 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 621 | 850 | IPR027417 | - | |
Vivi2g05185 | 1481 | Pfam | ABC transporter | 1253 | 1400 | IPR003439 | GO:0005524 | |
Vivi2g05185 | 1481 | Gene3D | ABC transporter type 1, transmembrane domain | 887 | 1216 | IPR036640 | GO:0005524|GO:0016020 | |
Vivi2g05185 | 1481 | Gene3D | ABC transporter type 1, transmembrane domain | 282 | 609 | IPR036640 | GO:0005524|GO:0016020 | |
Vivi2g05185 | 1481 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1225 | 1463 | IPR027417 | - | |
Vivi2g05185 | 1481 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 312 | 592 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vivi2g05185 | 1481 | SUPERFAMILY | ABC transporter transmembrane region | 300 | 605 | IPR036640 | GO:0005524|GO:0016020 | |
Vivi2g05185 | 1481 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 629 | 850 | IPR003439 | GO:0005524 | |
Vivi2g05185 | 1481 | Pfam | ABC transporter transmembrane region | 922 | 1178 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vivi2g05185 | 1481 | Pfam | ABC transporter transmembrane region | 311 | 576 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vivi2g05185 | 1481 | FunFam | ABC transporter C family member 10 | 295 | 608 | - | - | |
Vivi2g05185 | 1481 | Pfam | ABC transporter | 646 | 779 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g05185 | Vivi-Chr2 | 174530766 | 174536602 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g05185 | 985 | 1481 | Calmodulin-binding Proteins | AT2G36910 | 23.922 | 4.81e-29 | 124 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g05185 | K05666 | - | gmx:100811468 | 2028.06 |