Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05185 ATGAAAGATTTTTGGAACATGATCTGTGATGGTTCTGCTTGTTTTTCTTCGCATGGAGGAAAACATTATTGTTTCGCTTTTGAGGTTCTGAATGATCCTTCCTCATGCACCAACCATTTGTTTATCATTTTCCTTGATCTGTTGTTGCTAATAATGCTGTCATTTATGATGATTCAAAAGTGTTTGTTGAGGCCTATTCAAGGTCAGAATAGGGTGGAAAGGCATTCAAAGTTGCAGCTAGTTTCTGCAATAACCAATGGCTCTATTGGTTTGTTGCATTTTTGCTTAGGAATTTGGATTTTAGAGGAGAATTTAAGGAAAAATCTCACTGTTTTTTTTCTTAGTTTATGGATGCTAGAACTTGTTCAAGGATGCATATGGATGGTAGTTGCTTTGACTACAAGTCTTGTGTTGAAACAACTTCCAAGCACATGGATTTGGTTATTTTCAATACTTATATTCTTTGTTTCTAGTGTTTTATGTGCTTTGTCCTTATCTTATGCATTTAGCAGCAAAGAGTTGTCCCTTAAGGTTGCTTTAGATGTTCTATCTGTTTTGGGATCATTTTTGCTGCTTTTTTTCACATACAAAGCATGTAAGTATGAAAACATTGACAAGGAAGTTAATGGAAGTCTATATGCATCTTTAAATAGTGAGGTCCATGATGTTGATCGTGATAGCCCGATAGGCGTAACACCCTATGCCGATGCTGGACTTTTTAGTAGAATGTCGTTTTGGTGGTTGAATCCATTGATGAAAAAGGGTCAAGAGAAAACACTTGAGGACGAGGACATTCCTAAATTGCGAGAGTCAGATAGAGTAGAAGTGTGTTATTCGTTATTTACGGATCTGTTGAATAGTCAAAATCAAAAAGACGTGTCATCTCGATCATCGTTGTTGTGGACAATCGTTCTGTGTCATCAGAGAGAGATTTTGATATCGGGATTCTTTGCGTTTGTCAAGGTACTCACTTTATCTTCTTGTCCTCTACTTTTGAATGCCTTTGTATTGGTGGTTGAAGGTAATAGAAGTTTCAAATATGAAGGTCACTTATTGGCTATCACTCTTTTGTTTACAAAGATTTTAGAGTCCTTATCCCAGAGGCAATGGTATTTTCATTCTAGAGTCATTGGTATGAAAGTTAGGTCATTAATTACAGCAACAATTTACAAGAAACAACTGAGATTATCCAATACTGCTAGATTGATTCACTCGAGTGGCGAGATAATGAATTATGTGAATGTGGATGCTTATAGAATCGGAGAGTTTCCGTTTTGGTTTCACCAGACATGGACAATCGTTCTTCAGATATGTATTACTTTAGTCATCCTTTTCCGTGCAATTGGACTCGCGACAATTGCAACATTGGTGACGATAATTTTGACTGTGCTTTTAAACACTCCACTAGCAAAGCTACAACATAAGTTCCTAACCGAACTTCTTGTGGCCAAAGATGAAAGGTTGAAGGCGAATTCTGAGGCTCTAGTGAATGTTAAAGTGTTGAAGTTATATGCATGGGAAATCCATTTCAAAAATGCTATCGAAAACTTAAGAAATGTTGAACTAAAATGGTTATCTTCAGTTCTATTACAAAAGGCATATAGTAATATTCTCTTTTGGTTATCACCTATTTTGGTCTCTGCTGCTACCTTTATGGCATGTTACTTCTTGAAAGTTCCTTTACATGCAAATAATGTTTTCACATTCATCGCAACTGTGCGCCTTGTGCAAGAGCCTATTTCAACCATTGCAGAGGTTATTGGAGCGATCATTCAAGCAAAGATAGCTTTTTCTCGAGTTGTTAAATTTCTCGAGGCACCTGAGCTACAGACTACAACTGTTAGAAAAAATTGTTATGATGAGAAGTTGAAGGGCTCAATTGTAATCAAGTCTGCGAATTTTTCATGGGAAGATGATATATCGAAAACAACGATAAGAAACATAAATTTAAATGTTAGTCCTGGACAAAAAATAGCTATTTGTGGAGAAGTTGGCTCCGGAAAATCAACTTTATTAGCAGCTATTCTTGGTGAACTCCCTAACACTAAGGGGCAAATCGAAGTTTATGGAAAGGTTGCTTATGTTTCTCAAACAGCATGGATACAATCAGGAACAATACAGGAAAATATTTTGTTTGGATTACCTTTTGATTCTCAAAGGTATCAAGAATCACTTCATAGGTCTTCATTGATGAAGGATCTTGATTTGTTTGCGCGTGGTGATCTAACCGAGATAGGAGAGAGAGGTGTTAATCTAAGTGGAGGTCAGAAGCAGCGAATTCAACTTGCTCGAGCTCTTTATCAGAATGCAGATGTATATCTCTTAGACGATCCTTTCAGTGCTGTTGATGCGCACACTGCAAAAAAATTGTTCAGTGAATATATATTGGAAGGACTTACCGGAAAGACAGTCCTTCTCGTGACTCATCAAGTCGACTTTTTCCCTGCATGTGATTCTATTTTGTTGATGTCGGATGGAAATATACAATATGCTTCTAATTATCATGATCTATTGACCTTAAGCGAAGAATTTAAGGATCTGGTTAATGCACACAAAACGAAAGGTGGTTCTTCCCGGCTTGCAGATGTTACTTTAACTTCAATACATTCAAAGTCTAGTAAAGAGAAGATACAAGAATTTTCAGAGCAGTCGATTGATGTTATAAATGGTGATCGGTTAATTAAGCAAGAAGAAAGAGAAAAAGGAGACACGGGGTTGAAGCCTTACTTACAATATCTCAATAAAAAAAGAGGTTACATATACTTCCTTGCCACTGGTCTTTCTCACCTGATGTTTGTAATTTGCCAAATATTACAATACTCCTGGATGGCTGCTAGTGTTGACAATCCTCATGTCAGCGAATTGAAATTGCTTGGAGTTTACTTGTTGATTGCGTTTAGTTCTACAATGTTCGTTATAATTAGAAGTCTACTTGCAGTTGCATTGGGTTTTCAATCATCAAAAGTTTTATTTAGACAGTTAATAAATTCTCTTTTTCGTGCATCGATGTCTTTCTATGACTCTACGCCGTTGGGAAGGATACTTAGTAGGGTTTCATCAGATCTGAGTATCGTGGATCTTGATATCGCTTTTAGCCTCTCCAGTGGGGTAGCATCCACTATATCTTATTATGCAGGGCTAATAGTCTTAACATCCATCGCTTGGCAAGTCGTGTTTTTGTGTATACCAATGGCCTATGTTATTATTCGTATACAAAGACACTACTATGCATGTGCAAAAGAACTTATGCGGATGAATGGCACAACAAAGTCCTCAGTAGCTAACCATGTAGCTGAAACTGTTGCTGGAGTTATGACAATCCGAGCTTTTGAGGACGAAGAACGCTTTTTCAACAAGAATCTTGATTTAATTGATCTCAATGCTGGTGCTTTCTTCCACAGTTTTGTCTCAAACGAGTGGTTTATCCAACGGTTAGAAACAATCTACGCAGTCGTTCTTGCCTCTGCAACACTTTGCATTTCTATGCTTCCTCTAGGGACTTTAACTCCTGGTTTTGTCGGTATGGTACTTTCTTATGGCCTTTCGTTAAACAGTGTCTTAGTATATTCCATTCAATGCCAATGCACTCTAGCAAATTATATAGTATCTGTTGAGAGGATAAGTCAATACACCGATATACCAAGAGACGCCCAAGAAATGGTAGACGGAAATCATCCTCCACCTAATTGGCCAGTTGTAGGAAAAGTAGAAATAAAAGATTTGAAGATACGATACAGGCCTAACGGACCACTTATATTGCATGGTATCACATGCACATTTGAAGGAGGGCGCAAGATTGGTATTGTCGGTAGAACGGGAAGTGGAAAATCTACTCTTATAGGTGCATTGTTTCGTCTTGTGGAGTCGGCAGGAGGGAAAATTTTAGTTGATGGAATAGACATATCATCTATTAGGCTTCATGACTTGAGGTCAAGTTTTGGTATTATACCTCAAGATCCTACCCTTTTCATTGGGACTGTTAGATATAACTTGGATCCTTTATCTCAACATTCTGATCAAGAAATATGGGAGGTTCTTCAAAAGTGCCAATTGCAAGAGTCTGTCAAAGATAAAGGTGGTTTAGATTCCTCAGTTGTTGAAGACGGGTCAAATTGGAGCATTGGACAGAGGCAACTATTTTGTTTGGGACGTGCTCTTTTAAAGAGAAGTAGGATATTGGTGCTAGACGAAGCGACTGCATCAATTGATAATGCAACTGATTTGATTCTTCAGAATACCATTAGGACAGAGTTTGCAAATTGTACTGTGATAACAGTAGCACATAGGATACCAACTGTGATGGATTGCAACATGGTTCTTGCCATAAGTGATGGAAAATTGGTTGAGTATGATGAGCCATTAAAGTTGATAAACAGAGAAAGATCAATGTTTGGAAACCTTGTAAAAGAATACTGGTCTCATTTTCAATCAGCAGAATCACATTGA 4446 0.3754 MKDFWNMICDGSACFSSHGGKHYCFAFEVLNDPSSCTNHLFIIFLDLLLLIMLSFMMIQKCLLRPIQGQNRVERHSKLQLVSAITNGSIGLLHFCLGIWILEENLRKNLTVFFLSLWMLELVQGCIWMVVALTTSLVLKQLPSTWIWLFSILIFFVSSVLCALSLSYAFSSKELSLKVALDVLSVLGSFLLLFFTYKACKYENIDKEVNGSLYASLNSEVHDVDRDSPIGVTPYADAGLFSRMSFWWLNPLMKKGQEKTLEDEDIPKLRESDRVEVCYSLFTDLLNSQNQKDVSSRSSLLWTIVLCHQREILISGFFAFVKVLTLSSCPLLLNAFVLVVEGNRSFKYEGHLLAITLLFTKILESLSQRQWYFHSRVIGMKVRSLITATIYKKQLRLSNTARLIHSSGEIMNYVNVDAYRIGEFPFWFHQTWTIVLQICITLVILFRAIGLATIATLVTIILTVLLNTPLAKLQHKFLTELLVAKDERLKANSEALVNVKVLKLYAWEIHFKNAIENLRNVELKWLSSVLLQKAYSNILFWLSPILVSAATFMACYFLKVPLHANNVFTFIATVRLVQEPISTIAEVIGAIIQAKIAFSRVVKFLEAPELQTTTVRKNCYDEKLKGSIVIKSANFSWEDDISKTTIRNINLNVSPGQKIAICGEVGSGKSTLLAAILGELPNTKGQIEVYGKVAYVSQTAWIQSGTIQENILFGLPFDSQRYQESLHRSSLMKDLDLFARGDLTEIGERGVNLSGGQKQRIQLARALYQNADVYLLDDPFSAVDAHTAKKLFSEYILEGLTGKTVLLVTHQVDFFPACDSILLMSDGNIQYASNYHDLLTLSEEFKDLVNAHKTKGGSSRLADVTLTSIHSKSSKEKIQEFSEQSIDVINGDRLIKQEEREKGDTGLKPYLQYLNKKRGYIYFLATGLSHLMFVICQILQYSWMAASVDNPHVSELKLLGVYLLIAFSSTMFVIIRSLLAVALGFQSSKVLFRQLINSLFRASMSFYDSTPLGRILSRVSSDLSIVDLDIAFSLSSGVASTISYYAGLIVLTSIAWQVVFLCIPMAYVIIRIQRHYYACAKELMRMNGTTKSSVANHVAETVAGVMTIRAFEDEERFFNKNLDLIDLNAGAFFHSFVSNEWFIQRLETIYAVVLASATLCISMLPLGTLTPGFVGMVLSYGLSLNSVLVYSIQCQCTLANYIVSVERISQYTDIPRDAQEMVDGNHPPPNWPVVGKVEIKDLKIRYRPNGPLILHGITCTFEGGRKIGIVGRTGSGKSTLIGALFRLVESAGGKILVDGIDISSIRLHDLRSSFGIIPQDPTLFIGTVRYNLDPLSQHSDQEIWEVLQKCQLQESVKDKGGLDSSVVEDGSNWSIGQRQLFCLGRALLKRSRILVLDEATASIDNATDLILQNTIRTEFANCTVITVAHRIPTVMDCNMVLAISDGKLVEYDEPLKLINRERSMFGNLVKEYWSHFQSAESH 1481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05185 1481 FunFam ABC transporter C family member 5 886 1217 - -
Vivi2g05185 1481 FunFam ABC transporter C family member 5 614 857 - -
Vivi2g05185 1481 CDD ABC_6TM_ABCC_D1 313 600 IPR044746 GO:0140359
Vivi2g05185 1481 Gene3D - 1220 1470 IPR027417 -
Vivi2g05185 1481 Gene3D - 622 856 IPR027417 -
Vivi2g05185 1481 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1236 1469 IPR003439 GO:0005524
Vivi2g05185 1481 SUPERFAMILY ABC transporter transmembrane region 908 1216 IPR036640 GO:0005524|GO:0016020
Vivi2g05185 1481 CDD ABCC_MRP_domain2 1234 1453 - -
Vivi2g05185 1481 FunFam ABC transporter C family member 3 1219 1470 - -
Vivi2g05185 1481 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 235 1469 - -
Vivi2g05185 1481 ProSitePatterns ABC transporters family signature. 752 766 IPR017871 GO:0005524|GO:0016887
Vivi2g05185 1481 CDD ABC_6TM_ABCC_D2 918 1211 IPR044726 GO:0140359
Vivi2g05185 1481 CDD ABCC_MRP_domain1 627 826 - -
Vivi2g05185 1481 SMART AAA_5 654 835 IPR003593 GO:0016887
Vivi2g05185 1481 SMART AAA_5 1262 1453 IPR003593 GO:0016887
Vivi2g05185 1481 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 930 1199 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g05185 1481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 850 IPR027417 -
Vivi2g05185 1481 Pfam ABC transporter 1253 1400 IPR003439 GO:0005524
Vivi2g05185 1481 Gene3D ABC transporter type 1, transmembrane domain 887 1216 IPR036640 GO:0005524|GO:0016020
Vivi2g05185 1481 Gene3D ABC transporter type 1, transmembrane domain 282 609 IPR036640 GO:0005524|GO:0016020
Vivi2g05185 1481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1225 1463 IPR027417 -
Vivi2g05185 1481 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 312 592 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g05185 1481 SUPERFAMILY ABC transporter transmembrane region 300 605 IPR036640 GO:0005524|GO:0016020
Vivi2g05185 1481 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 629 850 IPR003439 GO:0005524
Vivi2g05185 1481 Pfam ABC transporter transmembrane region 922 1178 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g05185 1481 Pfam ABC transporter transmembrane region 311 576 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g05185 1481 FunFam ABC transporter C family member 10 295 608 - -
Vivi2g05185 1481 Pfam ABC transporter 646 779 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05185 Vivi-Chr2 174530766 174536602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05185 985 1481 Calmodulin-binding Proteins AT2G36910 23.922 4.81e-29 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05185 K05666 - gmx:100811468 2028.06