Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05181 ATGAGTGACCTTTGGTCCATGATTTGCGGTGACTCTGGTTGTTCTGATAATGGAGGAAATCATTGTTATGATGTAAAACTCTTGAAAGATCCTTCTTCATGCATCAACCATGTGTTTGTAAGTTGCTTTGACCTCTTCCTGCTGATCACTTTGTCATTCATCATGATCCTGAAGTCTTCCTTGAACCCCTTTCGGAGTCAAGTAAGATATTCAAACTTGCAGATTGTTTCAGCCATAACCAATGGCTCTCTTGGGCTTTTGCATTTATGCTTAGGAATTTGGATTTTAAGGGAGAAGTTAATGCAAACCGACAGTGCATTTCCTCTTAACGAGTGGTTGCTAGAACTCTTTCATGGACTCACATGGTTATCAGTAAGTTTAACTGTAAGCCTTCAGGTAAAACAACTCTCAAGAGTATGGTTGTGGATGTTTTCTGTTCTCACATTCTTTGTTGCTGGTATATTATGTGCGTTATTTGTGTTTGATTCAATTGACAGCGGGGAACTGTCTCTTGAGGCAGCTTTAGATGTTCTATCTTTTCCAGGAGCAGCATTACTGTTGTTATGCACATACACATACAAAGCATGTGAAGGTGAAGATGCTGACAGAGAAATAGGTGAAAGTCTTTATGCTCCTCTTAATGACCAACTCAATGAAGATGAGCCTGTAAGCACTGTAACCCCATTTTCAGAAGCTGGACTCTTTAGCAATTTATCATTTTGGTGGTTGAATCCTTTGATGAAAAGGGGTCGAGAGAAAACACTTCTAGATGAGGATATCCCAAAGTTAAGAGAGTTGGACCGATCAGAAAGTTGTTATTCATCGTTTGTTGAAAGGTTAAACAAACAAAAACAACAAGAACCGTCACCACATTCGTCAGTTTTATGGACAATAATTTTGTGCCACAAGAGCGAGATTTGGATCACAGGATTCTTGGCTTTTCTCAAGGTACTCACTCTGTCTTCTGGTCCTCTGCTTCTGAATGAATTTATATTGGTTGCAGAAGGTAATAAAAGTTTTAAATATGAAGGCTATGTATTGGTCATATCAATCTTCTTCATAAAGATCATAGAATCCATATCACAAAGACAATGGTATTTCCGCAGTAGACTAGTTGGAGTGAAAGTTAGATCACTACTTACTGCAGCCATTTATAAGAAAATTTTAAGGCTATCCAATTCTGCTAGACAGATCCATTCTGGAGGTGAGATAATGAATTATATGACAGTGGATGCTTATAGAATTGGAGAGTTTCCATTCTGGTTTCACCAGACTTGGACAACAATCCTCCAGTTAAGTATTGGTTTAGTAATTCTTTTCCGCACAATTGGACTAGCAACGCTAGCATCACTGGCAGTGATATTTCTCACTGTGATTTGCAACGGTCCAATAGCGAAGTTACAACACAAGTTTCAAAACAAACTTATGGTAGTACAAGATAAGAGATTAAAGGCTAGTTCTGAGGCTCTCGTGAATATGAAAGTCCTGAAGCTATATGCATGGGAAACACATTTTAAAAATGTTGTAGATTCCTTGAGAAATGCGGAACTTAAATTGTTATCTGCAGTGCAATTAAGAAGAGCATACAATATATTTTTCCTTTGGACCTCATTAATATTGGCATCTGCTGCTTCTTTTTTCGCATGTTACTTCTTGAATGTTCCTTTGAATGCAAGTAACGTTTTCACTTTTGTGGCAACTTTGCGCCTTGTTCAAGAACCAATTCAAACCATCTCGGATATTATTGCAGCGATCATTCAGGCAAAAGTTGCATTTGCTCGGATCATTAATTTCCTTGATGCACCAGAACTGCAGAGTGAAAACTTCAAGAAAAGGTGCTTCAATGAGAACCTCAGAGACTCAATTTCAATAAAATGTGCAGACTTTTCATGGGAAGATGATGCATTCAAGCCAACACTAAGGGACATAAACTTGGAGGTTGTACATGGACAAAAGGTGGCTATTTGTGGAGAAGTTGGTTCAGGCAAATCAACCCTCTTGGCAACAATTCTTGGAGAAGTTTCTAAAAAAAAAGGAACTATTGATGTTCATGGGAAGTTTGCATATGTTTCTCAAACAGCATGGATACAAACAGGCACGGTACGGGAAAATATTTTATTTGGATCTGAGTTGGATGATCAAAGGTACCAAGAAACACTTCAGAGGTCTTCACTGGTAAAGGATCTTGAGTTGTTTCCCTATGGGGACCTCACTGAAATAGGCGAGAGAGGAGTAAATTTAAGTGGAGGACAAAAGCAACGAATTCAACTTGCTCGTGCTCTTTATCAGAATGCTGATATATATCTATTGGATGATCCGTTTAGCGCTGTTGATGCACATACTGCAAAAAATTTGTTTAATGACTACATCATGGAAGGACTCAAAGGGAAAACAGTCTTACTCGTGACACATCAAGTCGATTTCCTCCCAGCATTTGATTCTATTTTGTTAATGTCTAATGGGGCAATCCAACAAGCTGGTCCATATCACCAGTTATTGACCTCAAGCAAAGAATTCAATGACCTTGTCAATGCTCACAAAGAGACTGCTGGTTCTGACCAACTTGTGAGTGTTACTTTTTCCCAAAGACATTCAACTTCCGTAAAGAGTGTGCAAGCTTCCGCGTTAAAGCAGTATAAAGCACCAAATGGAAATCAATTAATTCAACAAGAAGAGAGAGGGGAAGGAGACATGGGATTGAAGCCTTACTTACAATATCTGAATCGGATGAAAGGCTATATATTATTCTCTATTACTTCCCTTTGCTTCCTTATTTTTATGGTTTGTCAAATATTGCAAAACTCATGGATGGCTGCCAATGTTGAAAATCCTCTTGTCAGCACATTGCAACTGGTTTTAGTTTATTTCCTAATCGGTGCTTTTTCATCAGTTTTCATGTTAATCAGATGTCAACTTGTAGTTACTTTGGGTCTTCAATCATCAAAAGATTTATTTTCACAGTTGATGAACTCCCTCTTCCGCGCACCCATGTCATTTTATGACTCTACACCATTGGGAAGGGTACTTAGTAGGGTTACATCTGATATGAGTATTGTGGATCTTGACATTCCATTTAGCCTCAGTTTTGCTGTCATTGGCACTATATCTCTTTATTCTAATCTTATAGTTTTGGCGGTTGTCACGTGGCAAGTCTTGATAGTGGCTATACCAATGGTTTATATTGCTATTCACATGCAGAGATACTACTTTGCATCAGCAAAAGAAGTAATGCGGTTGAATGGCACAACAAAATCCTCTTTAGCAAATCATGTAGCCGAAACTGTGGCTGGAGCCGCAACAATAAGGGCTTTTGAGGAGGAAGATCGTTCTTTTGAGAAGAACCTTGATCTAATTGATAATAATGCTAGTGCTTTTTTTCATAGTTTTGCCTCAAACGAGTGGTTGATCCAACGGTTAGAAACAATCAGTGCGGTTGTTCTTGCTGCTACAACACTTTGCCTAGTTATGCTGCCCCCTGGAACTTTCCCCTCAGGAATTATTGGAATGGCTCTATCTTATGGCCTATCACTAAACAGTGCTTTAGTATTTGCAATTCAAAGTCAATGCATTCTTGCTAATCACATAATATCAGTAGAGAGGCTAAATCAATATATGCATATACAAAGTGAGGCCGAAGAAATAGTAAAAGAAAATCGCCCTCCTTTGAATTGGCCAGCTTCGGGCACAATAGAAATAAATGACTTGAAGATACGATACAGACATGGCGGACCACTTGTTCTTAATGGGATCACATGCACATTTAAAGCCGGTCACAAGATTGGTATTGTTGGCAGAACAGGCAGTGGGAAGTCCACTCTTATTGGGGCTTTATTTCGTCTTGTGGAACCAGCGGAAGGAAAAATTGTAGTTGATGGCATAGACATCTCATCTATTGGCCTTCATGATTTGAGGTCACGATTTGGGATTATACCTCAGGATCCTACCCTTTTTAATGGGACAGTAAGATTTAACTTGGATCTTTTATCTCAACACACGGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAATTGCGAGAAGTCATCCAAGGGAAAAAAGAAGGCTTAAACTCTTCAGTTGCTGAAGATGGATCAAATTGGAGTATGGGACAAAGGCAGTTATTCTGTTTGGGGCGTGCTCTTTTGAGGAGAAGTAGGATATTAGTATTGGACGAAGCAACTGCATCAACTGCATCAATTGATAATTCCACGAGTTTGCTGATGGAAAATTGGCGGAGTATGATGAGCCAATGA 4254 0.3905 MSDLWSMICGDSGCSDNGGNHCYDVKLLKDPSSCINHVFVSCFDLFLLITLSFIMILKSSLNPFRSQVRYSNLQIVSAITNGSLGLLHLCLGIWILREKLMQTDSAFPLNEWLLELFHGLTWLSVSLTVSLQVKQLSRVWLWMFSVLTFFVAGILCALFVFDSIDSGELSLEAALDVLSFPGAALLLLCTYTYKACEGEDADREIGESLYAPLNDQLNEDEPVSTVTPFSEAGLFSNLSFWWLNPLMKRGREKTLLDEDIPKLRELDRSESCYSSFVERLNKQKQQEPSPHSSVLWTIILCHKSEIWITGFLAFLKVLTLSSGPLLLNEFILVAEGNKSFKYEGYVLVISIFFIKIIESISQRQWYFRSRLVGVKVRSLLTAAIYKKILRLSNSARQIHSGGEIMNYMTVDAYRIGEFPFWFHQTWTTILQLSIGLVILFRTIGLATLASLAVIFLTVICNGPIAKLQHKFQNKLMVVQDKRLKASSEALVNMKVLKLYAWETHFKNVVDSLRNAELKLLSAVQLRRAYNIFFLWTSLILASAASFFACYFLNVPLNASNVFTFVATLRLVQEPIQTISDIIAAIIQAKVAFARIINFLDAPELQSENFKKRCFNENLRDSISIKCADFSWEDDAFKPTLRDINLEVVHGQKVAICGEVGSGKSTLLATILGEVSKKKGTIDVHGKFAYVSQTAWIQTGTVRENILFGSELDDQRYQETLQRSSLVKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTAKNLFNDYIMEGLKGKTVLLVTHQVDFLPAFDSILLMSNGAIQQAGPYHQLLTSSKEFNDLVNAHKETAGSDQLVSVTFSQRHSTSVKSVQASALKQYKAPNGNQLIQQEERGEGDMGLKPYLQYLNRMKGYILFSITSLCFLIFMVCQILQNSWMAANVENPLVSTLQLVLVYFLIGAFSSVFMLIRCQLVVTLGLQSSKDLFSQLMNSLFRAPMSFYDSTPLGRVLSRVTSDMSIVDLDIPFSLSFAVIGTISLYSNLIVLAVVTWQVLIVAIPMVYIAIHMQRYYFASAKEVMRLNGTTKSSLANHVAETVAGAATIRAFEEEDRSFEKNLDLIDNNASAFFHSFASNEWLIQRLETISAVVLAATTLCLVMLPPGTFPSGIIGMALSYGLSLNSALVFAIQSQCILANHIISVERLNQYMHIQSEAEEIVKENRPPLNWPASGTIEINDLKIRYRHGGPLVLNGITCTFKAGHKIGIVGRTGSGKSTLIGALFRLVEPAEGKIVVDGIDISSIGLHDLRSRFGIIPQDPTLFNGTVRFNLDLLSQHTDQEIWEVLGKCQLREVIQGKKEGLNSSVAEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASTASIDNSTSLLMENWRSMMSQ 1417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05181 1417 Pfam ABC transporter transmembrane region 307 572 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g05181 1417 Pfam ABC transporter transmembrane region 933 1154 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g05181 1417 Gene3D ABC transporter type 1, transmembrane domain 878 1212 IPR036640 GO:0005524|GO:0016020
Vivi2g05181 1417 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1230 1416 IPR003439 GO:0005524
Vivi2g05181 1417 Gene3D - 598 867 IPR027417 -
Vivi2g05181 1417 FunFam Multidrug resistance-associated protein member 4 1214 1415 - -
Vivi2g05181 1417 CDD ABCC_MRP_domain2 1228 1408 - -
Vivi2g05181 1417 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 624 845 IPR003439 GO:0005524
Vivi2g05181 1417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1219 1397 IPR027417 -
Vivi2g05181 1417 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 918 1193 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g05181 1417 CDD ABC_6TM_ABCC_D1 308 595 IPR044746 GO:0140359
Vivi2g05181 1417 FunFam ABC transporter C family member 10 290 603 - -
Vivi2g05181 1417 FunFam ABC transporter C family member 10 605 858 - -
Vivi2g05181 1417 Pfam ABC transporter 1247 1395 IPR003439 GO:0005524
Vivi2g05181 1417 CDD ABCC_MRP_domain1 622 821 - -
Vivi2g05181 1417 SMART AAA_5 1256 1409 IPR003593 GO:0016887
Vivi2g05181 1417 SMART AAA_5 649 822 IPR003593 GO:0016887
Vivi2g05181 1417 FunFam ABC transporter C family member 5 879 1211 - -
Vivi2g05181 1417 Gene3D ABC transporter type 1, transmembrane domain 294 597 IPR036640 GO:0005524|GO:0016020
Vivi2g05181 1417 SUPERFAMILY ABC transporter transmembrane region 295 602 IPR036640 GO:0005524|GO:0016020
Vivi2g05181 1417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 616 845 IPR027417 -
Vivi2g05181 1417 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 307 587 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g05181 1417 ProSitePatterns ABC transporters family signature. 747 761 IPR017871 GO:0005524|GO:0016887
Vivi2g05181 1417 SUPERFAMILY ABC transporter transmembrane region 904 1212 IPR036640 GO:0005524|GO:0016020
Vivi2g05181 1417 Gene3D - 1213 1414 IPR027417 -
Vivi2g05181 1417 Pfam ABC transporter 640 774 IPR003439 GO:0005524
Vivi2g05181 1417 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 229 1397 - -
Vivi2g05181 1417 CDD ABC_6TM_ABCC_D2 916 1205 IPR044726 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05181 Vivi-Chr2 174476597 174483688 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05181 435 873 Calmodulin-binding Proteins AT2G36910 24.569 4.42e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05181 K05666 - gmx:100787314 2058.88