Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05177 ATGAATGACTTTTGGAGCATGATTTGTGGGCACTGTGGTGATGGTGATAATGGAGGGAAATCCTTCTGTTATGATTTAAAACTTTTGAAAGATCCTTCCTCATGCATCAACCATGTCTTGGTAACTTGCTTTGATGTGTTCCTGCTAATCATGTTGTCATTCATCATAATCTTGAAGTCTTACTCAAGATCCTTTCCGAGTACAACAAGATATTCAAACTCACAGCTAGTTTCTGCCATAGCCAATGGCTCTCTTGGTTTGTTGCATTTATCCTTGGGAATTTGGGTTTTAGAGGAAAAGATAAGAAAAACCCACAATGCCTTTCCAATTATCGGGTGGTTCCGAGAACTCTTTCATGGACTCACATGGTTATCAGTAAGTTTAACTGTAAGCCTACAGATAAAACAGCTCTCAACAGCATGGTTGTGGATGTTTTCTGTTCTCACATTCTTTGTATCTGGTATATTGTGTGCGCTATTTGTGTCTGATTCAATTGACAGCGGCAAACTGTCTCGTGAGGCAGCTTTATATGTTCTATCTTTTCCAGGAGCAGCATTACTGTTGTTATGCACATACACATACAATGCTGACAGGGAAATAGGTGAAAGTCTTTATGCTCCTCTTAATGACCAACTCAATGAAGATGAGCCTGTAAGCACTGTAACCCCATTTTCAGAAGCTGGACTCTTTAGCAATATATCATTTTGGTGGTTGAATCCTTTGATGAAAAGGGGTAGAGAGAAAACACTTCTAGACGAGGATATCCCAAAGTTAAGAGAGTTGGACCGTTCAGAAAGTTGTTATTCATCGTTTGTAGAAAGGTTAAACGAACAAAAACAACATGAACCGTCAACAAATTCGTCGGTTTTATGGACAATAATTTTGTGCCACAAGAGCGAGATTTGGATCACAGGATTCTTGGCTTTTCTCAAGGTACTCACTCTATCTTCTGGTCCTCTGCTTCTGAATGAATTTATATTGGTTGCAGAAGGTAATGAAAGTTTCAAATATGAAGGCTATGTATTAGTCATATCAATCTTCTTCATAAAGATCATAGAATCCTTATCACAAAGACAATGGTATTTCCGCAGTAGACTAGTTGGAGTGAAAGTTAGATCACTACTTACTGCAGCCGTTTATAAGAAAATTTTAAGGCTATCCAATTCTGCTAGACAGATCCATTCCGGAGGTGAGATAATGAATTATATGACAGTGGATGCTTATAGAATTGGAGAATTTCCATTCTGGTTTCACCAGAGTTGGACAACAATCCTCCAGTTAGGTATTGGTTTAGTAATTCTTTTCCGCACAATTGGACTAGCAACACTAGCATCACTGGCAGTCATATTTCTCACTGTGATTTGCAACGGTCCAATAGCGAAGTTACAACACAAGTTTCAAAACAAACTTATGGTAGTACAAGATAAGAGATTAAAGGCTAGTTCTGAGGCTATGGTGAATATGAAAGTCCTGAAGCTATATGCATGGGAAACACATTTTAAAAATGTTGTAGATTCCTTAAGAAATGCGGAACTCAAATTGTTATCTGCAGTTCAATTAAGAAGAGCATACAATATATTTTTCCTTTGGACCTCATTAATATTGGCATCTGCTGCTACTTTTTTCGCATGTTACTTCTTGAATGTTCCTTTGAATGCAAGTAAAGTTTTCACTTTTGTGGCAACTTTGCGTCTTGTTCAAGAACCAATTCAAACTATCTCGGATATTATTGCAGCGATCATTCAGGCAAAAGTTGCATTTACTCGGATCATTAATTTCCTTGATGCACCAGAACTGCAGAGTGAAAACTTCAAGAAAAGGTGCTTCAATGAGAACCTCAGAAACACAATTTCAATAAAATGTGCAGATTTTTCATGGGAAGATGATGCGTTCAAGCCAACACTAAGGGACATAAATTTGGAGGTTATACATGGCCAAAAGGTGGCTATTTGTGGAGAAGTTGGTTCAGGAAAATCAACCCTCTTAGCAACAATTCTTGGAGAAGTTTCTAAAACAAAAGGAACAATTGATGTTCATGGGAGGTTTGCATATGTTTCTCAAGCAGCATGGATACAAACAGGCACGGTACAGGAAAATATTTTATTTGGATCTGAGTTGGATGATCAAAGGTACCAAGAAACACTTCAAAAGTCTTCGTTGGCAAAAGACCTTGAGTTGTTGCCCTATGGGGACCTCACTGAAATAGGCGAGAGAGGAGTAAATTTAAGTGGAGGACAAAAGCAGCGAATTCAACTTGCTCGTGCTCTTTATCAAAATGCTGATATATATCTATTGGATGATCCGTTTAGCGCTGTTGATGCACATACTGCCAAAAATTTGTTTAATGTAATGAGATATTTTCTTCTCATACTAGTAAATGTTTACCATTATTTTTTCTATACTAAAGTTGGCTTTGAAACTTGGCAGGAATACATCATGGAAGGACTCAAAGGGAAAACAGTCTTACTCGTGACACATCAAGTCGATTTCCTCCCGGCATTTGATTCTATTTTGTTGATGTCTAATGGGGCAATCCAACAAGCTGGTCCATATCACCAATTGTTGATCTCAAGCAAAGAATTCAATGACCTTGTCAATGCTCACAAAGAGACTGCTGGTTCTGACCAGCACGAGAGTGTTACTTTTTCCCAAAGACATTCAACTTCCATAAAGAGTGTGCAAGCTTCCCTGTTAAAGCAGTATAAAGCACCAAATGGAAATCAATTAATTCAGCAAGAAGAGAGAGGGGAAGGAGACATGGGATTGAAGCCTTACTTACAATATCTAAATCGGATGAAAGGCTATATAGTATTCTCTATGGCTTCCCTTTGCTTCCTTATTTTTATGGTTTGTCAGATATTGCAAAACTCATGGATGGCTGCCAAAGTTGAAAATCCTCTTGTCAGCACATTGCAATTGGTTCTAGTTTATTTCCTAATTGGTGCTTTTTCATCAGTTTTCATGTTAATCAGATGTCAACTTGTGGTTACTTTGGGTCTTCAATCATCAAAAGATTTATTTTCACAATTGATGAACTCCCTCTTCCGCGCACCCATGTCATTTTATGACTCTACACCGTTGGGAAGGGTACTTAGCAGGGTTACATCTGATATGAGTATTGTGGATCTTGACATTCCATTTAGCCTCAGTTTTGCTGTTATTGGCACTATATCTCTTTATTCTAATCTTATAGTTTTGGCGGTTGTCACATGGCAAGTCTTGATAGTGGCAATACCAATGGTTTATCTTGCTATTCACCTCCAGAGATACTACTTTGCCTCAGCAAAAGAAGTAATGCGGTTGAATGGCACAACAAAATCCTCTTTAGCAAATCATGTAGCCGAAACTGTTGCTGGAGCTGTAACAATAAGGGCTTTTGAAGAGGAAGATCGTTCGTTTGAGAAGAACCTTGATCTAATTGATAATAATGCTAGTGCTTTTTTTCATAGTTTTTCCTCAAACGAGTGGTTGATCCAACGGTTAGAAACAATCAGTGCGGTTGTTCTTGCCGCTACAACACTTTGCCTGGTTATGCTGCCCCCTGGAACTTTCCCCTCAGGAATTATTGGAATGGCTCTATCTTATGGCCTATCACTAAACAGTGCTTTAGTATTTGCAATTCAAAGTCAATGCATTCTTGCTAATCACATAATATCAGTAGAGAGGCTAAACCAATATATGCATATACAAAGTGAGGCCGAAGAAATAGTAAAAGGAAATCGCCCTCCTTTGAATTGGCCAGCTTCGGGCACAATAGAAATAAATGACTTGAAGATACGATACAGACATGGCGGACCACTTGTTCTTCATGGGATCACATGCACATTTAAAGCCGGTCACAAGATTGGTGTTGTTGGCAGAACAGGCAGTGGGAAGTCCACTCTTATTGGGGCGTTATTTCGTCTTGTGGAACCAGCGGAAGGAAAAATTGTAGTTGATGGCATAGACATCTCATCTATAGGTCTTCATGATTTGAGGTCACGTCTTGGGATTATACCTCAGGATCCTACCCTTTTTAATGGGACAGTAAGATTTAACTTGGACCCTTTATCTCAACACACGGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAATTGCGAGAAGTCATCCAAGGGAAAAAAGAAGGCTTAAACTCTTCAGTTGTTGAAGATGGATCAAATTGGAGTATGGGACAAAGGCAGTTATTCTGTTTGGGGCGTGCACTTTTGAGGAGAAGTAGGATATTAGTATTGGACGAAGCAACTGCATCAATTGATAATTCTACTGACCTGATTGTGCAGAAAACCATTAGGGCTGAGTTTGCAGATTGTACGGTGATCACAGTAGCACATAGGATACCAACTGTGATGGATTGCACTATGGTTCTTGCTATAAATGATGGAAAACTGGCGGAGTATGATGAGCCAATGAGCTTGATGAAGAGAGAAGAATCGATGTTCAGGCAGCTTGTTAAGGAATACTGGTCTCATATTCAGTCTGCAGAATTGCGTTGA 4497 0.3903 MNDFWSMICGHCGDGDNGGKSFCYDLKLLKDPSSCINHVLVTCFDVFLLIMLSFIIILKSYSRSFPSTTRYSNSQLVSAIANGSLGLLHLSLGIWVLEEKIRKTHNAFPIIGWFRELFHGLTWLSVSLTVSLQIKQLSTAWLWMFSVLTFFVSGILCALFVSDSIDSGKLSREAALYVLSFPGAALLLLCTYTYNADREIGESLYAPLNDQLNEDEPVSTVTPFSEAGLFSNISFWWLNPLMKRGREKTLLDEDIPKLRELDRSESCYSSFVERLNEQKQHEPSTNSSVLWTIILCHKSEIWITGFLAFLKVLTLSSGPLLLNEFILVAEGNESFKYEGYVLVISIFFIKIIESLSQRQWYFRSRLVGVKVRSLLTAAVYKKILRLSNSARQIHSGGEIMNYMTVDAYRIGEFPFWFHQSWTTILQLGIGLVILFRTIGLATLASLAVIFLTVICNGPIAKLQHKFQNKLMVVQDKRLKASSEAMVNMKVLKLYAWETHFKNVVDSLRNAELKLLSAVQLRRAYNIFFLWTSLILASAATFFACYFLNVPLNASKVFTFVATLRLVQEPIQTISDIIAAIIQAKVAFTRIINFLDAPELQSENFKKRCFNENLRNTISIKCADFSWEDDAFKPTLRDINLEVIHGQKVAICGEVGSGKSTLLATILGEVSKTKGTIDVHGRFAYVSQAAWIQTGTVQENILFGSELDDQRYQETLQKSSLAKDLELLPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTAKNLFNVMRYFLLILVNVYHYFFYTKVGFETWQEYIMEGLKGKTVLLVTHQVDFLPAFDSILLMSNGAIQQAGPYHQLLISSKEFNDLVNAHKETAGSDQHESVTFSQRHSTSIKSVQASLLKQYKAPNGNQLIQQEERGEGDMGLKPYLQYLNRMKGYIVFSMASLCFLIFMVCQILQNSWMAAKVENPLVSTLQLVLVYFLIGAFSSVFMLIRCQLVVTLGLQSSKDLFSQLMNSLFRAPMSFYDSTPLGRVLSRVTSDMSIVDLDIPFSLSFAVIGTISLYSNLIVLAVVTWQVLIVAIPMVYLAIHLQRYYFASAKEVMRLNGTTKSSLANHVAETVAGAVTIRAFEEEDRSFEKNLDLIDNNASAFFHSFSSNEWLIQRLETISAVVLAATTLCLVMLPPGTFPSGIIGMALSYGLSLNSALVFAIQSQCILANHIISVERLNQYMHIQSEAEEIVKGNRPPLNWPASGTIEINDLKIRYRHGGPLVLHGITCTFKAGHKIGVVGRTGSGKSTLIGALFRLVEPAEGKIVVDGIDISSIGLHDLRSRLGIIPQDPTLFNGTVRFNLDPLSQHTDQEIWEVLGKCQLREVIQGKKEGLNSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNSTDLIVQKTIRAEFADCTVITVAHRIPTVMDCTMVLAINDGKLAEYDEPMSLMKREESMFRQLVKEYWSHIQSAELR 1498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05177 1498 Gene3D ABC transporter type 1, transmembrane domain 289 592 IPR036640 GO:0005524|GO:0016020
Vivi2g05177 1498 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 619 867 IPR003439 GO:0005524
Vivi2g05177 1498 SMART AAA_5 1278 1462 IPR003593 GO:0016887
Vivi2g05177 1498 SMART AAA_5 644 844 IPR003593 GO:0016887
Vivi2g05177 1498 FunFam ABC transporter C family member 5 901 1233 - -
Vivi2g05177 1498 Gene3D - 1236 1488 IPR027417 -
Vivi2g05177 1498 CDD ABCC_MRP_domain1 617 843 - -
Vivi2g05177 1498 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 302 582 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g05177 1498 Pfam ABC transporter 1269 1417 IPR003439 GO:0005524
Vivi2g05177 1498 FunFam ABC transporter C family member 3 1235 1487 - -
Vivi2g05177 1498 Pfam ABC transporter transmembrane region 965 1176 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g05177 1498 Pfam ABC transporter transmembrane region 302 567 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g05177 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1242 1485 IPR027417 -
Vivi2g05177 1498 FunFam Multidrug resistance-associated protein 1 598 786 - -
Vivi2g05177 1498 Pfam ABC transporter 635 769 IPR003439 GO:0005524
Vivi2g05177 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 611 786 IPR027417 -
Vivi2g05177 1498 SUPERFAMILY ABC transporter transmembrane region 290 597 IPR036640 GO:0005524|GO:0016020
Vivi2g05177 1498 CDD ABCC_MRP_domain2 1250 1470 - -
Vivi2g05177 1498 CDD ABC_6TM_ABCC_D2 943 1227 IPR044726 GO:0140359
Vivi2g05177 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 809 867 IPR027417 -
Vivi2g05177 1498 Gene3D - 593 893 IPR027417 -
Vivi2g05177 1498 ProSitePatterns ABC transporters family signature. 742 756 IPR017871 GO:0005524|GO:0016887
Vivi2g05177 1498 FunFam ABC transporter C family member 10 285 598 - -
Vivi2g05177 1498 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 941 1215 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g05177 1498 CDD ABC_6TM_ABCC_D1 303 590 IPR044746 GO:0140359
Vivi2g05177 1498 Gene3D ABC transporter type 1, transmembrane domain 900 1234 IPR036640 GO:0005524|GO:0016020
Vivi2g05177 1498 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1252 1486 IPR003439 GO:0005524
Vivi2g05177 1498 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 224 1486 - -
Vivi2g05177 1498 SUPERFAMILY ABC transporter transmembrane region 925 1234 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05177 Vivi-Chr2 174393320 174400604 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05177 430 900 Calmodulin-binding Proteins AT2G36910 22.984 1.12e-21 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05177 K05666 - gmx:100787314 2150.17