Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05149 ATGGCAGGAGATGATGGTAAGAAAGTTGCAATAGGAATCGACCTAGGAACAACCAATTCATGTGTTGCAGTGTGGAGACATGGTCAGATAGAGATCATAATGAATGATCAAGGGAATAGAACAACACCATCGTATGTTGCCTTTACCGACTCTCATAGATTGATTGGTGATTCTGCTTTCAACATGGTTACTTCCAACTCAACCAACACTGTTTTCGATGCAAAGAGACTAATTGGTAGGAAATTTTCTGACCCCATAGTTCAGAGTGATATGAAATTATGGCCATTTCAAGTAATTGGGGACTTCAATGACAAACCTATGATTGTTGTCAATTACAAGAATGAGGAAAAACATTTTGCTGCTGAAGAAATCTCATCCATGGTATTGGCAAAAATGCGAGAGATTGCAGAAGCTTACCTTGGATGTATAGTGAAGGATGTTGTTATAACTGTTCCAGCTTACTTCAATAACTCACAACGCCAGTCTACTAGAGATGCAGGAGTTATAGCAGGCCTCAACGTTATGCGAATAATCAATGAACCTACTGCAGCAGCAATTGCGTATGGCCTTCACATGAAATCATTTAATCATGGAAGAAGAAATGTATTCATTTTTGACTTAGGTGGTGGCACATTGGATGTTTCCATCCTCACATTTGAGGAGGGTGATATTCAAGTTAAGGCCATTGCGGGCGACACTCACCTCGGAGGACAAGACTTTGATAACTCGTTAGTTAATCATTTTGTGAAGGAGTTCTTGAGGAAGCATAAAATTGACATCAGTGGAGACCGAAGAGCGGTTAGGAGGTTAAAGAACGCTTGCGAGAAAGCAAAGAGGATACTTTCGTCCTCTACCGAGACCACCGTTGAGATAGATAGTTTAAATCAAGGTATAGATTTCTACTCAACAATTAGCCGCGCGATGTTTGATGAACTAAACAAGAATCACTTCAAAAAGTGCATGGAGATTGTTGAAAAATGTTTAATAGATAGTGGAATGGACAAGAATAGTATTCATGATGTTGTCCTTGTTGGTGGCTCAACAAGGATTGTAAAAGTGCAAGAACTGTTGAGAGGTTTCTTTGAAGGGAAGCAATTATGCAAAAGCATCAATGCAGATGAAGCTGTTGCACATGGTGCTGCTGTTCATGCTTCAATATTGAGTGGTGAGTTTAGTGAAAAGGTTGAAGATTTTGTATTGAGGGAGGTGATTCCTTTGTCCCTTGGATTGCAGACTCATGGTGGAATCATGGAGATTATAATTCCTAGGAATACTATAATTCCTACAAAGATGGAACATGTATTCACCACACATCTTCACAACCAAGTCAATATTTTAATCCATGTTTATGAGGGTGAGAGGCTAAGAACTGAGGAAAACAACTTGCTAGGAAAGTTTGTGTTGGAAATTCCTCCGGCACCGGTAGGTGATCCTCAAATCAAAATCAGCTTTCAAATTGATGATGATGGCATCTTACATGTCTCCAGCACAGAAAAATCTCTTGGAGTCAATAAAAAGTTTAAAATAACAAGTGACAAGGGAAGGCTTTCAAAGGAAGAAGTCGAGAGGATGATCAAAGATGCTGACAAGTACAAAGATGAAGACAAGAAGTATAGGAAAAAGGTAGAAGCAAGAAGGGCATTGGAGAAGTATGCAATCAACATGAGAAATGCCATAGAAGATGAGGAGATTAACTTGAAGCTTTCTTCAGAAGACAAGAGAATGATTAGTGAAGCAATTATTGTTGTTTTAAGGTGGCTTGATGTGAATGAATTTGCAGAACAACATGATTTTGAGTATTATGGAAGCATGCTTTCAAGTGTGTTTGAACCAATCATTGTGAAGATGATAAAGAATGAGGAGAATGGTGTGAAACCAGGTACGGTTGATGGATATCCTCTTCATAGTAGAAAGAAACGTTGGATATTATTATTAGCAAAATATAGTTTTCAGATAGTATTTTCAGTTGCAACAGGTAGCATCAGTGGGTTAGTTTCGGATATAATTAAGGACTTGTTCAAATAA 2025 0.3842 MAGDDGKKVAIGIDLGTTNSCVAVWRHGQIEIIMNDQGNRTTPSYVAFTDSHRLIGDSAFNMVTSNSTNTVFDAKRLIGRKFSDPIVQSDMKLWPFQVIGDFNDKPMIVVNYKNEEKHFAAEEISSMVLAKMREIAEAYLGCIVKDVVITVPAYFNNSQRQSTRDAGVIAGLNVMRIINEPTAAAIAYGLHMKSFNHGRRNVFIFDLGGGTLDVSILTFEEGDIQVKAIAGDTHLGGQDFDNSLVNHFVKEFLRKHKIDISGDRRAVRRLKNACEKAKRILSSSTETTVEIDSLNQGIDFYSTISRAMFDELNKNHFKKCMEIVEKCLIDSGMDKNSIHDVVLVGGSTRIVKVQELLRGFFEGKQLCKSINADEAVAHGAAVHASILSGEFSEKVEDFVLREVIPLSLGLQTHGGIMEIIIPRNTIIPTKMEHVFTTHLHNQVNILIHVYEGERLRTEENNLLGKFVLEIPPAPVGDPQIKISFQIDDDGILHVSSTEKSLGVNKKFKITSDKGRLSKEEVERMIKDADKYKDEDKKYRKKVEARRALEKYAINMRNAIEDEEINLKLSSEDKRMISEAIIVVLRWLDVNEFAEQHDFEYYGSMLSSVFEPIIVKMIKNEENGVKPGTVDGYPLHSRKKRWILLLAKYSFQIVFSVATGSISGLVSDIIKDLFK 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05149 674 Gene3D - 193 367 - -
Vivi2g05149 674 FunFam Heat shock 70 kDa protein 390 545 - -
Vivi2g05149 674 SUPERFAMILY Actin-like ATPase domain 198 389 IPR043129 -
Vivi2g05149 674 ProSitePatterns Heat shock hsp70 proteins family signature 2. 204 217 IPR018181 -
Vivi2g05149 674 FunFam Heat shock protein 70 11 198 - -
Vivi2g05149 674 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Vivi2g05149 674 Gene3D Actin; Chain A, domain 4 236 319 - -
Vivi2g05149 674 Pfam Hsp70 protein 10 616 IPR013126 GO:0005524|GO:0140662
Vivi2g05149 674 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 621 IPR029048 -
Vivi2g05149 674 SUPERFAMILY Actin-like ATPase domain 8 192 IPR043129 -
Vivi2g05149 674 Coils Coil 541 561 - -
Vivi2g05149 674 Gene3D - 72 127 - -
Vivi2g05149 674 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 393 549 IPR029047 -
Vivi2g05149 674 Gene3D - 545 618 IPR029048 -
Vivi2g05149 674 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 392 544 IPR029047 -
Vivi2g05149 674 Gene3D - 11 384 - -
Vivi2g05149 674 FunFam Heat shock 70 kDa protein 72 127 - -
Vivi2g05149 674 PANTHER HEAT SHOCK PROTEIN 70KDA 10 571 IPR013126 GO:0005524|GO:0140662
Vivi2g05149 674 PRINTS 70kDa heat shock protein signature 210 220 - -
Vivi2g05149 674 PRINTS 70kDa heat shock protein signature 477 493 - -
Vivi2g05149 674 PRINTS 70kDa heat shock protein signature 37 49 - -
Vivi2g05149 674 PRINTS 70kDa heat shock protein signature 147 167 - -
Vivi2g05149 674 PRINTS 70kDa heat shock protein signature 397 416 - -
Vivi2g05149 674 PRINTS 70kDa heat shock protein signature 338 354 - -
Vivi2g05149 674 PRINTS 70kDa heat shock protein signature 370 390 - -
Vivi2g05149 674 PRINTS 70kDa heat shock protein signature 9 22 - -
Vivi2g05149 674 FunFam Heat shock 70 kDa 236 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05149 Vivi-Chr2 174009687 174012094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05149 1 618 Calmodulin-binding Proteins AT3G12580 65.590 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05149 K03283 - gmx:100798636 867.07