Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05143 ATGGAGGTAAATAAATCTTCCACCAAGAACATCAACAATGAGAAAGGGTCTTCTTTTGAAGTGGATGGTGTACAGCCTACCCCGAGTCCACTCCGTAAAATGATCGCCGTAGCGTCCATCGCTACTGGCGTTCAGTTCGGATGGGCTCTTCAGCTCTCCCTTTTGACACCATACTCGCAGACTCTCGGAGTTCCGCATGTATGGTCGTCCTTTATCTGGCTTTGTGGCCCAATCTCTGGACTTCTAGTCCAGCCTATAGTTGGTTACTATAGTGACCGGAGCACTTCCCGCTTCGGTCGCAGACGTCCCTTTATTTTAAGCGGAGCCTTAGCCGTTGCAGTTTCTGTTTTCCTCATTGGTTACGCAGCTGACCTTGGCCACTCCATGGGCGACGACCTGTCTAAAAAAACCCGACCAAGGGCCGTCGCTATCTTCGTCATTGGCTTCTGGATCCTCGACGTTGCGAACAACATGCTCCAGGGACCATGTCGTGCTTTCCTCGCCGACCTTGCAGCCGGGGACGAGAAGAAGACAAGAACAGCAATGAGTTTCTTCTCTTTCTTCATGGCCGTCGGTAGTATCCTTGGATATGCTGCTGGTTCCTTCGGCAAACTCCATAAAATCTTCCCTTTCACAGAAACCGTAGCATGTAATGTGTTCTGCCAAAATCTTAAGAGCTGTTTCTTTTTCTCCATCCTCCTCTTAATCGTCCTTGCCAGCTTCGCTCTCATCTACGTCAAGGAAACACCAAAGACGAAACTAGAGTTGAACGACGACGACAAGCAGGTTTCTTGTTTCGGAGAGTTGTTCCATGCATTGAAGGAATTGAAGAGACCAATGTGGATATTGATGTTAGTAACAGCCGTGAACTGGATCGCGTGGTTCCCGTTCTTCTTGTTTGACACCGACTGGATGGGCCGTGAGGTGTACGGAGGAGCTCCAGGAGAGAAAGCATATGCCACTGGTGTGAGAGTTGGTTCATTGGGACTCATGCTTAATTCTATTGTTCTTGGATTAATGTCTCTAGCTGTGGAGCCATTGGGAAGATTGGTTGGGGGGATCAAGAGACTTTGGGGGATAGTTAATTTCATTCTAGCTATTTGTTTGGCAATGACTGTCCTCATCACAAAAATTGCTGAGCATGATCGTCATTTGACCGGCGGTGCCACCGTTGGACATCCTTCCGACGGTGTTAAAGCCGGTTCCATGATCTTCTTTGCAGTTCTTGGAATTCCTTTAGCAATTACTTTCAGTGTTCCTTTTGCTCTAGCATCAATATACTCCAGTGCTTCAGGAGCTGGACAAGGTTTATCTCTAGGAGTCTTGAATCTTGCAATTGTGATACCACAGATGTTGGTGTCAGCACTGAATGGACCATGGGATGCTCTATTTGGTGGTGGTAATTTGCCGGCGTTTGTGGTGGGAGCGGTGGCTGCCGCCGTCAGTGCTGTTTTGGCGATAGTGTTGCTGCCGTCGGTGAAACCAGATGATGAGGCCAAGGTTAAACTTGCTGCCGGCGGTTTTCATTAG 1530 0.485 MEVNKSSTKNINNEKGSSFEVDGVQPTPSPLRKMIAVASIATGVQFGWALQLSLLTPYSQTLGVPHVWSSFIWLCGPISGLLVQPIVGYYSDRSTSRFGRRRPFILSGALAVAVSVFLIGYAADLGHSMGDDLSKKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLADLAAGDEKKTRTAMSFFSFFMAVGSILGYAAGSFGKLHKIFPFTETVACNVFCQNLKSCFFFSILLLIVLASFALIYVKETPKTKLELNDDDKQVSCFGELFHALKELKRPMWILMLVTAVNWIAWFPFFLFDTDWMGREVYGGAPGEKAYATGVRVGSLGLMLNSIVLGLMSLAVEPLGRLVGGIKRLWGIVNFILAICLAMTVLITKIAEHDRHLTGGATVGHPSDGVKAGSMIFFAVLGIPLAITFSVPFALASIYSSASGAGQGLSLGVLNLAIVIPQMLVSALNGPWDALFGGGNLPAFVVGAVAAAVSAVLAIVLLPSVKPDDEAKVKLAAGGFH 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05143 509 Gene3D MFS general substrate transporter like domains 27 490 IPR036259 -
Vivi2g05143 509 Pfam MFS/sugar transport protein 39 293 - -
Vivi2g05143 509 ProSiteProfiles Major facilitator superfamily (MFS) profile. 31 494 IPR020846 GO:0022857
Vivi2g05143 509 PANTHER SUGAR TRANSPORTER 31 489 - -
Vivi2g05143 509 SUPERFAMILY MFS general substrate transporter 33 495 IPR036259 -
Vivi2g05143 509 CDD MFS_SLC45_SUC 34 469 - -
Vivi2g05143 509 MobiDBLite consensus disorder prediction 1 25 - -
Vivi2g05143 509 NCBIfam sucrose/proton symporter 30 495 IPR005989 GO:0005886|GO:0008515|GO:0015770
Vivi2g05143 509 FunFam Sucrose transport protein 28 490 - -
Vivi2g05143 509 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05143 Vivi-Chr2 173767637 173769870 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05143 1 509 Sucrose Transporter Gene Family AT1G22710 65.444 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05143 K15378 - gmx:100784153 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05143 2 173767637 173769870 Vivi2g05143 2 173767637 173769870 ECH