Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05131 ATGGGTTCTGAAACATTTATTGAAGTTATACTAGCAATACTCTTACCTCCTGTTGGTGTTTTCCTTCGTTATGGCTGTGGAGTGGAGTTCTGGATAGATCTGGTGCTTACATTACTGGGATACATTCCAGGGATTATATATGCCATTTATGTATTGGTTGGGTGA 165 0.3939 MGSETFIEVILAILLPPVGVFLRYGCGVEFWIDLVLTLLGYIPGIIYAIYVLVG 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05131 54 ProSitePatterns Uncharacterized protein family UPF0057 signature. 10 25 IPR000612 GO:0016020
Vivi2g05131 54 Pfam Proteolipid membrane potential modulator 6 53 IPR000612 GO:0016020
Vivi2g05131 54 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 2 53 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05131 Vivi-Chr2 173575516 173576292 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05131 1 54 RCI2 Gene Family AT2G38905 90.741 5.19e-29 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05131 - - gmx:100789888 110.153