Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05120 ATGGGGAAAAAAGGAAGTTGGTTTTCTGCAGTGAAGAAAGTTTTCAGTCATGATTCCAGAAAAGACAAGAAAAGTCAGAAATCAAAGAAAAAAAGTACCCAGGACACAGAAGTGAAATCAGAAGAAGTTGTAAAAGTTTCTGTTCCAGAGATAGAAGATGTGAAATTAAGTGAGTTAGAGAATGAACAAAATAAACAGGCTATTTCTCTTGCTTTTGCTACTGCTGCCGCGGCGGGGGCGGCTGTTGCTGCTGCTCAGGCTGCTGCCGAGGTTGTTCGTCTCACGGGTATGCCTCATTACCCTTCCAAGACTATGGAGGAATTGGCTGCTATCAAGATTCAGACAGTGTTTCGCGGATATTTAGCGAGAAGAGCTTTGCGCGCCTTGAGAGGTTTGGTGAGGTTGAAGACAATGATACAAGGACAGTCTGTTAAACGGCAAGCAGACAGCACCTTAAGATGCATGCAAACTCTAGCAAGATTGCAGTCACAGGTTCGCGAAAGGCGTGTTCGAATGTCCGAGGAGAATCAGGCTCGTCAGTGCCAACTACAACAGAAGCGCGAAAAAGAACTTGTGAAGTTGCAAACTTCTCAGGTTGGAGAAGAATGGAATGATAGCTTGAAGTCAAAGGAACAAATTGATGCAAAATTATTGCAAAGACAAGAAGCTGCTTTCAAAAGAGAGAGGGCTTTGGCCTATTCATTTTCACATCAGCAAACTTGGAAGAACTCTTCAAAATCTATAAACCAAACATTTATGGATCCAAACAATCCCCACTGGGGATGGAGTTGGTTAGAGCGATGGATGGCGACTCGACCATGGGAAGTCGAAAGCATTATTATGAATCACAAACCTTCTCCGGTTGGAAAGAAATTAATAAGACAAAGCACTCAGAATTCTCCTTCAACTTCAAAGACAAAGCCATCAAGTTCAAAGGGTGAAACTATTGATGACTCAAGAAGCTTGTTCAGTGTTCAATCCGAAAGGTATCGAAGATATAGTAGCATTGCAGGATCGTCGGTTAGAGATGACGCGAGCGTTGAAAGCTCGCCGGTGTTTCCAAGTTACATGGCACTCACTAGTTCTGCAAAGGCAAAGTCCAAACTAATGCGGAAAACATCGCCATCAGCATCTTCGGTTTCTGCAAGGAAGAGACTTTCTTTCCCTGCTTCTCCGGCTGGTTCAAGAAGGCACTCCGATCCACCTAAGGTGGAAATATAA 1221 0.4365 MGKKGSWFSAVKKVFSHDSRKDKKSQKSKKKSTQDTEVKSEEVVKVSVPEIEDVKLSELENEQNKQAISLAFATAAAAGAAVAAAQAAAEVVRLTGMPHYPSKTMEELAAIKIQTVFRGYLARRALRALRGLVRLKTMIQGQSVKRQADSTLRCMQTLARLQSQVRERRVRMSEENQARQCQLQQKREKELVKLQTSQVGEEWNDSLKSKEQIDAKLLQRQEAAFKRERALAYSFSHQQTWKNSSKSINQTFMDPNNPHWGWSWLERWMATRPWEVESIIMNHKPSPVGKKLIRQSTQNSPSTSKTKPSSSKGETIDDSRSLFSVQSERYRRYSSIAGSSVRDDASVESSPVFPSYMALTSSAKAKSKLMRKTSPSASSVSARKRLSFPASPAGSRRHSDPPKVEI 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05120 406 Gene3D - 65 131 - -
Vivi2g05120 406 MobiDBLite consensus disorder prediction 362 406 - -
Vivi2g05120 406 PANTHER IQ-DOMAIN 5-RELATED 1 401 - -
Vivi2g05120 406 SMART iq_5 105 127 IPR000048 GO:0005515
Vivi2g05120 406 Pfam IQ calmodulin-binding motif 109 127 IPR000048 GO:0005515
Vivi2g05120 406 MobiDBLite consensus disorder prediction 362 385 - -
Vivi2g05120 406 MobiDBLite consensus disorder prediction 293 320 - -
Vivi2g05120 406 ProSiteProfiles IQ motif profile. 106 134 IPR000048 GO:0005515
Vivi2g05120 406 MobiDBLite consensus disorder prediction 16 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05120 Vivi-Chr2 173490239 173532456 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05120 1 405 IQD Protein Family AT5G03040 47.174 4.42e-118 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05120 - - cam:101501235 488.419