Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05119 ATGGGGAAAAAAGGAAGTTGGTTTTCTGCAGTGAAGAAAGTTTTCAGTCATGATTCCAGAAAAGACAAGAAAAGTCAGAAATCAAAGAAAAAAAGTACCCAGGACACAGAAGTGAAATCAGAAGAAGTTGTAAAAGTTTCTGTTCCAGAGATAGAAGATGTGAAATTAAGTGAGTTAGAGAATGAACAAAATAAACAGGCTATTTCTCTTGCTTTTGCTACTGCTGCCGCGGCGGGGGCGGCTGTTGCTGCTGCTCAGGCTGCTGCCGAGGTTGTTCGTCTCACGGGTATGCCTCATTACCCTTCCAAGACTATGGAGGAATTGGCTGCTATCAAGATTCAGACAGTGTTTCGCGGATATTTAGCGAGAAGAGCTTTGCGCGCCTTGAGAGGTTTGGTGAGGTTGAAGACAATGATACAAGGACAGTCTGTTAAACGGCAAGCAGACAGCACCTTAAGATGCATGCAAACTCTAGCAAGATTGCAGTCACAGGTTCGCGAAAGGCGTGTTCGAATGTCCGAGGAGAATCAGGCTCGTCAGTGCCAACTACAACAGAAGCGCGAAAAAGAACTTGTGAAGTTGCAAACTTCTGTTGGAGAAGAATGGAATGATAGCTTGAAGTCAAAGGAACAAATTGATGCAAAATTATTGCAAAGACAAGAAGCTGCTTTCAAAAGAGAGAGGGCTTTGGCCTATTCATTTTCACATCAGCAAACTTGGAAGAACTCTTCAAAATCTATAAACCAAACATTTATGGATCCAAACAATCCCCACTGGGGATGGAGTTGGTTAGAGCGATGGATGGCGACTCGACCATGGGAAGTCGAAAGCATTATTATGAATCACAAACCTTCTCCGGTTGGAAAGAAATTAATAAGACAAAGCACTCAGAATTCTCCTTCAACTTCAAAGACAAAGCCATCAAGTTCAAAGGGTGAAACTATTGATGACTCAAGAAGCTTGTTCAGTGTTCAATCCGAAAGGTATCGAAGATATAGTAGCATTGCAGGATCGTCGGTTAGAGATGACGCGAGCGTTGAAAGCTCGCCGGTGTTTCCAAGTTACATGGCACTCACTAGTTCTGCAAAGGCAAAGTCCAAACTAATGCGGAAAACATCGCCATCAGCATCTTCGGTTTCTGCAAGGAAGAGACTTTCTTTCCCTGCTTCTCCGGCTGGTTCAAGAAGGCACTCCGATCCACCTAAGGTGGAAATATAA 1218 0.436 MGKKGSWFSAVKKVFSHDSRKDKKSQKSKKKSTQDTEVKSEEVVKVSVPEIEDVKLSELENEQNKQAISLAFATAAAAGAAVAAAQAAAEVVRLTGMPHYPSKTMEELAAIKIQTVFRGYLARRALRALRGLVRLKTMIQGQSVKRQADSTLRCMQTLARLQSQVRERRVRMSEENQARQCQLQQKREKELVKLQTSVGEEWNDSLKSKEQIDAKLLQRQEAAFKRERALAYSFSHQQTWKNSSKSINQTFMDPNNPHWGWSWLERWMATRPWEVESIIMNHKPSPVGKKLIRQSTQNSPSTSKTKPSSSKGETIDDSRSLFSVQSERYRRYSSIAGSSVRDDASVESSPVFPSYMALTSSAKAKSKLMRKTSPSASSVSARKRLSFPASPAGSRRHSDPPKVEI 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05119 405 SMART iq_5 105 127 IPR000048 GO:0005515
Vivi2g05119 405 Pfam IQ calmodulin-binding motif 109 127 IPR000048 GO:0005515
Vivi2g05119 405 ProSiteProfiles IQ motif profile. 106 134 IPR000048 GO:0005515
Vivi2g05119 405 MobiDBLite consensus disorder prediction 361 405 - -
Vivi2g05119 405 PANTHER IQ-DOMAIN 5-RELATED 1 400 - -
Vivi2g05119 405 Gene3D - 61 134 - -
Vivi2g05119 405 MobiDBLite consensus disorder prediction 361 384 - -
Vivi2g05119 405 MobiDBLite consensus disorder prediction 16 42 - -
Vivi2g05119 405 MobiDBLite consensus disorder prediction 292 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05119 Vivi-Chr2 173490239 173532457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05119 1 404 IQD Protein Family AT5G03040 47.712 3.26e-118 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05119 - - cam:101501235 481.87