Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g05094 | ATGGCCCTAAATAAGACGGGAAACGAGCATGGGCTGTTTCCTCAATACAACCAACAAGAATCGCGTAGTGGTGTTGCAAATGTACATAATAATAGTAATAATAAAAGTATCCCTAAAGAGGTTGGAAGAGTTTTTGTTTCACCTGATGTATCGCAAAATCGTGAGAGTAGGTTTGGATTGAATAGGGAGAATGGCCATGTGAGGTACGAAGATCTTACAAATATTTTAGGGTTGAAGAGAATGGACTCGGAGAGTTTTTCTGATGTAGGTGAGTTTATCCCTAAAAAACAGCCGATGGACAACGGCCTTTCTGTCAATGTTTTAAGCAAAGGTCAAAAGGGAGACAACAACCATGGTGGCCGTGGTGCGTTGAGGAAGACATATAGTGAGTCAATTAGTGAGCAAATTGGTACTAAGCTGGCTGTGTTATCGCCTGTTTACTTACATAAAAGATCTCACTCAAATGGGTTTTCCGGTTCTGGAATTTTAGAAGATTCTTTGTCTGGTGGAAAAATGAAGTTTCTTTGCAGCTTCGGCGGAAAAATATTACCGAGGCCCGGTGATGGTAAACTCAGATACGTTGGGGGAGAAACTCACATTATATCTATCCAAAAGGATATTCCGTGGGAAGAGCTTATGAACAAGACTTTGCGTATTTGCAGTCAACCTCACACAATCAAATACCAACTTCCAGGGGAAGATCTTGATGCTCTAATATCGGTTTCCTCCGATGAGGATCTTCAAAACATGATAGAGGAATATCATGAACTTGAAAGTCACGAAGGTTCTCAGAAACTTCGAATTTTTTTAGTTCCTTTGAGTGAATCTGAAGAGACAACATCAACCGATGCAAACACCGTTCTGCAGAATGACCCAGATTACCAATACGTTGTTGCTTTAAACGGCATAATAGACCATAGCCCTAAGAAAAACATCGGTGGGCAAAGTTTGGCAAACGAAACAAATTATTCAGGGAATAGTTTCAGTTTTGCCCCAACAATCGCCTCTTCTCCTAAGGAGATCAGGGATGGTAATAAAGGTATGAGTGGTTTAAATCCAGATAGAATTTTGAATGATTCCGTAAATCTTCAAAGTCCATTGCGAATTTCTCCTACTCCGGTTCAAGCTGCAGGTTCTAGTACAGGTTATATACAATTGCTTGGCGGTAACTCATGCCAGGGAAGTATTGACAGCAATGCATCATTTGTTACTGCTCAGATGCATTCTGGAAACTCGAGCATCAATGCTGCTGATTGCCGACACCCTCAACAAGCTGTTCCTCGTCAACATGGTGACATTGGTCCGCCCAAAAATCTCAATGAACAGTATTTTGATAACTGCAATGCAAATAATGGTTACAGCGATGATGTTTTTGGTGGAACCTTGCTCAATGATAAAATATTCTCAAGAAATCTGATCACTCAACAGACCGAATCTTATGGAATTAATAACGTTCTGCCTCATGGGATGCCTCATGCTTTTTCTGATTCACAGTTGCATCCAAGTGGATCAAAGTCTATTTACTGCTCACAAGAAGGAATTACCCCGTCTTTCTCCTTGAACCTTGAAAAAGCTGAATTATCTTCGACAGTGGGTGTCTCACAAGTGAACCTTATCAAGGGTCAACACGATCCCTTCCTCCATCATCCTCAAATACAAAGTAAGATGCCAAATGTGGAGTCAGCTGAGATGCATAGACGGCAAGGTGTGGCATCATCATCTCCCTACCCGGAATCAGTTGGAACGAATGATCGCATTAATAAGGACAGCATTTTAACGGAAAAAAAGTACCTTGTTGCTCAAACCGACGTGAGTGGATCCAACTTTGTTGAAAACGACGTGCAGGAAAATCCTTTGAAGTTAGAAAGGATGATGGTAAATGAAGATAAGTATCCTATTTCTAAGAAGGATAACAACGCTTACGAGGGAAATTCAACTGTCAACTACATGAGTGAATTGCAGCTTTTGGATACATTCCCGACTAATAACATAAGTTCTCAGATTGGTACGCAATATAATTGGGATCAACCTCGTGAGGACACGCTTCCTTTGTCATCAGGCATAACAGGACTCTCACTAACTAACCTTGTCGACAAGACTCCGTCTGATCTTCTTGACATTGGCCAAAAGACAAGTTATGGCAGAAATATCAATTTAAATTCTCCAATCTCAGAATATGCAGAAAACTCTCGTGACAAAAGTTCTGTCAGAGATGATATGTTCAATTTCTCCTTCGATCCACATTCTCTTAAATCTGCACAAGTTCAGCCTTCTCAGAATCAGAACACTACAGGTTTTCATGATAATCCAACAATAAACTCTGAAAGTTTGAGTCCTGCTGTACTTCATGATGATGTCTGTCCAAGTTTGATCTTGCCGGTTGATGGCCTGGATAATTCAAGAAAGAATATTTCTTTTAAAAAGGAACCTTCTTTTCTCAATGACTTCATTACAAGCACCGATCAAATGGTTGATCAGTTTAATCACGAACATTCTGCCTCTGGATTGTCAAAAGTTGAAGGTGAAATTTTAGGACAATTGAAAAAATCAGAAAGGTCTAATAATGCTAAACTAGTGGAGTCATTTGCTGTAGCAGAAGATGCGATTGGTGTTCCTTCAAATCGCAAGTCTTCACCAGTGCACACCCCACATAATTTTGATGAAGTTGGAAGTGATGTATCTCCATCTCCAACAGAAATAGAGAGCACCATCCCAGAGTCTGATCCCGAGGATTATAAAGACGATCAAGCCGACGTGAATGACTTTCTTTCTGATGCAATGATAGCAGAAATGGAGGCCAGCATATACGGTTTGCAGATAATCAGGAACACTGATCTTGAAGAACTTATGGAGTTAGGATCTGGTACCTATGGAACTGTTTATCATGGAAAATGGCGAGGAACAGATGTTGCAATCAAGAGAATCAAAAAGAGCTGCTTTGGAGGGAGAACTTCTGAGCAAGAACGGTTGGCAAAAGATTTCTGGAGAGAGGCACAGATCCTGTCAAATCTTCATCATCCCAATGTTCTCGCATTTTATGGAATCGTACCCGACGGAGCTTGTGGGACTTTAGCAACTGTAACAGAATATATGGTTAATGGTTCCCTTAGACATGTTCTTGTCAAGAACAACAGATTACTAGATCGTCGTAAAAAGCTTATAATTGCCATGGATGCAGCTTTTGGCATGGAATATTTGCACTCAAAGAATATTGTCCATTTTGATTTGAAGTGTGACAATTTGCTTGTTAATTTAAGGGATCCACAGCGACCCATATGCAAGGTTGGAGATTTTGGATTATCAAGAATAAAACGAAATACCCTTGTATCTGGAGGTGTGCGGGGAACCCTTCCATGGATGGCACCAGAGCTGTTGAATGGTAATAGCAGCCGGGTTTCTGAAAAGGTTGACGTTTTCTCATTTGGTATCTCAATGTGGGAGTTATTGACAGGAGAGGAACCTTATGCAGATATGCATTGTGGAGCCATTATTGGGGGCATTGTAAAGAACACACTTCGACCGCCGATTCCAGAACGATGTGATCCTGAATGGAGAAAGCTTATGGAAGAGTGCTGGTCACGCGACCCTGAATATCGTCCATCGTTCACCGAGATAACAAACAGGTTAAGATCCATGTCTATGGCCCTTCAAGGAAAGGGGGTTGAAGAGAAGGCATGGCAATTGAGAGCTACTAAAGTTCCATAG | 3705 | 0.41 | MALNKTGNEHGLFPQYNQQESRSGVANVHNNSNNKSIPKEVGRVFVSPDVSQNRESRFGLNRENGHVRYEDLTNILGLKRMDSESFSDVGEFIPKKQPMDNGLSVNVLSKGQKGDNNHGGRGALRKTYSESISEQIGTKLAVLSPVYLHKRSHSNGFSGSGILEDSLSGGKMKFLCSFGGKILPRPGDGKLRYVGGETHIISIQKDIPWEELMNKTLRICSQPHTIKYQLPGEDLDALISVSSDEDLQNMIEEYHELESHEGSQKLRIFLVPLSESEETTSTDANTVLQNDPDYQYVVALNGIIDHSPKKNIGGQSLANETNYSGNSFSFAPTIASSPKEIRDGNKGMSGLNPDRILNDSVNLQSPLRISPTPVQAAGSSTGYIQLLGGNSCQGSIDSNASFVTAQMHSGNSSINAADCRHPQQAVPRQHGDIGPPKNLNEQYFDNCNANNGYSDDVFGGTLLNDKIFSRNLITQQTESYGINNVLPHGMPHAFSDSQLHPSGSKSIYCSQEGITPSFSLNLEKAELSSTVGVSQVNLIKGQHDPFLHHPQIQSKMPNVESAEMHRRQGVASSSPYPESVGTNDRINKDSILTEKKYLVAQTDVSGSNFVENDVQENPLKLERMMVNEDKYPISKKDNNAYEGNSTVNYMSELQLLDTFPTNNISSQIGTQYNWDQPREDTLPLSSGITGLSLTNLVDKTPSDLLDIGQKTSYGRNINLNSPISEYAENSRDKSSVRDDMFNFSFDPHSLKSAQVQPSQNQNTTGFHDNPTINSESLSPAVLHDDVCPSLILPVDGLDNSRKNISFKKEPSFLNDFITSTDQMVDQFNHEHSASGLSKVEGEILGQLKKSERSNNAKLVESFAVAEDAIGVPSNRKSSPVHTPHNFDEVGSDVSPSPTEIESTIPESDPEDYKDDQADVNDFLSDAMIAEMEASIYGLQIIRNTDLEELMELGSGTYGTVYHGKWRGTDVAIKRIKKSCFGGRTSEQERLAKDFWREAQILSNLHHPNVLAFYGIVPDGACGTLATVTEYMVNGSLRHVLVKNNRLLDRRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGNSSRVSEKVDVFSFGISMWELLTGEEPYADMHCGAIIGGIVKNTLRPPIPERCDPEWRKLMEECWSRDPEYRPSFTEITNRLRSMSMALQGKGVEEKAWQLRATKVP | 1234 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g05094 | 1234 | PRINTS | Tyrosine kinase catalytic domain signature | 1065 | 1083 | IPR001245 | GO:0004672|GO:0006468 | |
Vivi2g05094 | 1234 | PRINTS | Tyrosine kinase catalytic domain signature | 1028 | 1041 | IPR001245 | GO:0004672|GO:0006468 | |
Vivi2g05094 | 1234 | PRINTS | Tyrosine kinase catalytic domain signature | 1136 | 1158 | IPR001245 | GO:0004672|GO:0006468 | |
Vivi2g05094 | 1234 | PRINTS | Tyrosine kinase catalytic domain signature | 1180 | 1202 | IPR001245 | GO:0004672|GO:0006468 | |
Vivi2g05094 | 1234 | ProSitePatterns | Protein kinases ATP-binding region signature. | 952 | 977 | IPR017441 | GO:0005524 | |
Vivi2g05094 | 1234 | FunFam | Octicosapeptide/phox/Bem1p domain kinase superfamily protein | 939 | 1033 | - | - | |
Vivi2g05094 | 1234 | SMART | serkin_6 | 946 | 1215 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi2g05094 | 1234 | SUPERFAMILY | CAD & PB1 domains | 188 | 276 | - | - | |
Vivi2g05094 | 1234 | Gene3D | Phosphorylase Kinase; domain 1 | 939 | 1033 | - | - | |
Vivi2g05094 | 1234 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Vivi2g05094 | 1234 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1034 | 1232 | - | - | |
Vivi2g05094 | 1234 | Pfam | Protein tyrosine and serine/threonine kinase | 949 | 1209 | IPR001245 | GO:0004672|GO:0006468 | |
Vivi2g05094 | 1234 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 224 | 1212 | - | - | |
Vivi2g05094 | 1234 | SUPERFAMILY | Protein kinase-like (PK-like) | 934 | 1208 | IPR011009 | - | |
Vivi2g05094 | 1234 | MobiDBLite | consensus disorder prediction | 873 | 913 | - | - | |
Vivi2g05094 | 1234 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1071 | 1083 | IPR008271 | GO:0004672|GO:0006468 | |
Vivi2g05094 | 1234 | MobiDBLite | consensus disorder prediction | 10 | 36 | - | - | |
Vivi2g05094 | 1234 | Pfam | PB1 domain | 188 | 272 | IPR000270 | GO:0005515 | |
Vivi2g05094 | 1234 | SMART | PB1_new | 186 | 273 | IPR000270 | GO:0005515 | |
Vivi2g05094 | 1234 | MobiDBLite | consensus disorder prediction | 335 | 357 | - | - | |
Vivi2g05094 | 1234 | Gene3D | - | 190 | 272 | - | - | |
Vivi2g05094 | 1234 | ProSiteProfiles | Protein kinase domain profile. | 946 | 1216 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi2g05094 | 1234 | CDD | STKc_MAP3K-like | 952 | 1209 | - | - | |
Vivi2g05094 | 1234 | FunFam | Octicosapeptide/phox/Bem1p domain kinase superfamily protein | 1034 | 1225 | - | - | |
Vivi2g05094 | 1234 | MobiDBLite | consensus disorder prediction | 889 | 903 | - | - | |
Vivi2g05094 | 1234 | CDD | PB1_UP2 | 175 | 270 | - | - | |
Vivi2g05094 | 1234 | FunFam | Octicosapeptide/phox/Bem1p domain kinase superfamily protein | 191 | 273 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g05094 | Vivi-Chr2 | 172689975 | 172698606 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g05094 | 170 | 303 | MAP Kinase Kinase Kinase | AT1G16270 | 61.481 | 1.93e-42 | 167 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-6 | Vivi2g05094 | PK_Tyr_Ser-Thr | 6.6e-62 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g05094 | - | - | aprc:113862751 | 1474.91 |