Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05044 ATGATGATTCTCACAGCCCTTTTGGTCATTCTTGTGACACTATTGATTAAAGTTTTTTATGACACAATTTCTTGTTATTTGCTTAAACCATTAAGCATCAAGAAGACTATGGAGAAACAAGGTGTGTTTTGTCCTAAACCTAGGTTTCTAACAGGCAACCTTAAAGAGATCTCATCTTTTGTTTCTAATGCTACTTCTAAAGACATGGAATCAATCAACCATGATATTGTTGGTCGTCTTTTGCCTCATTTTGTTGCTTGGTCTAAGCAGTATGGAAAAAGATTCTTCTATTGGAACGGAATAGAGCCAAGATTGTGTCTAACAGAAAGTGAATTGATCAAGGAATTTCTTTCGAAATATAGTACAATATCTGGAAAATCATGGCAGCAACAACAAGGATCTAAGAATTTTATAGGAAAAGGTTTGTTGATGGCAAATGGTGATGATTGGTATCACCAACGTCACTTAGTTTCTCCTGCATTCATGGGAGAAAAACTCAAGAGTTATGCTGTACACATGACGGAATGCACTAAAGAAATGCTTGAATCACTTCAAAATGCAACATTGGATTGTGACAAAAATGAGGTTGAAATTGGAGAATATTTCACAAAACTCACTGCAGATATTATTTCAAGAACTGAGTTTGGTACAAATTATGAAAAGGGAAAACAAATATTTCATCTTCTCACACAATTACAAGCTCTTTGTGCTCAAGCAACTAGAAAGCTTTGGTTTCCTGGAAGCAGGTTTTTTCCTAATGCTTATAATAGAGAGATCAAGTCATTGAAGATGGAAGTAGAAAGACTGTTGATGGAGATAATACAAAGTAGAAAAGATGGTGTGAAAATGGGAAGAAGCAATTCTTATGGGAATGACTTATTGGGAATACTTTTAGATGAGATTGAAAAGAGTGGTAGCTTAAACCTCCAATTAGTTATGGATGAATGCAAAACATTCTTCTTTGCTGGACATGATACAACTTCACTCTTACTCACATGGACTGTTATGTTGCTTGCTACTAATCCAAGTTGGCAAGAAAAAGTTAGAATTGAAGTTAAAGAGATTTTCAATCAAGGAATGCCTTCTGTTGATCAACTCTCCAAGCTCAATGTGTTGTATATGGTAATCAATGAGTCAATGAGACTATATCCTCCGGCAACCCTACTTCCTAGAATGGCTTTTCAAGATATTGTTTTAGGTGATCTGTATATTCCTAAAGGTTTATCAGTTTGGATTCCAGTATTGGCTATTCACCATAGCGAAGAATTATGGGGAAAAGATGCAAATGAATTCAATCCACAAAGATTTGCTTCAAAATCATTCATGTCTGGTCGTTTCTTACCATTTGCTTCTGGCCCAAGAAACTGTGTTGGACAATCATTTGCTATGATGGAAGCTAAGATTATTTTGGCAATGTTGGTTTCTAGGTTTAGCTTCACTATTTCAGAGAATTATAAACATGCACCAATCACTGTCCTTACTATTAAGCCTAAATATGGTATGCAAATTTGTTTGAAGGCGTTAGATTCATAA 1533 0.3516 MMILTALLVILVTLLIKVFYDTISCYLLKPLSIKKTMEKQGVFCPKPRFLTGNLKEISSFVSNATSKDMESINHDIVGRLLPHFVAWSKQYGKRFFYWNGIEPRLCLTESELIKEFLSKYSTISGKSWQQQQGSKNFIGKGLLMANGDDWYHQRHLVSPAFMGEKLKSYAVHMTECTKEMLESLQNATLDCDKNEVEIGEYFTKLTADIISRTEFGTNYEKGKQIFHLLTQLQALCAQATRKLWFPGSRFFPNAYNREIKSLKMEVERLLMEIIQSRKDGVKMGRSNSYGNDLLGILLDEIEKSGSLNLQLVMDECKTFFFAGHDTTSLLLTWTVMLLATNPSWQEKVRIEVKEIFNQGMPSVDQLSKLNVLYMVINESMRLYPPATLLPRMAFQDIVLGDLYIPKGLSVWIPVLAIHHSEELWGKDANEFNPQRFASKSFMSGRFLPFASGPRNCVGQSFAMMEAKIILAMLVSRFSFTISENYKHAPITVLTIKPKYGMQICLKALDS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05044 510 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05044 510 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05044 510 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05044 510 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05044 510 Pfam Cytochrome P450 84 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05044 510 Coils Coil 259 279 - -
Vivi2g05044 510 Gene3D Cytochrome P450 45 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05044 510 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05044 510 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05044 510 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05044 510 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05044 510 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05044 510 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05044 510 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05044 510 PANTHER CYTOCHROME P450 FAMILY MEMBER 28 500 - -
Vivi2g05044 510 SUPERFAMILY Cytochrome P450 77 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05044 Vivi-Chr2 171528466 171532822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05044 1 369 Cytochrome P450 AT5G38450 66.933 4.30e-167 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05044 K10717 - gmx:100812567 817.764