Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05043 ATGATGATTCTCACAACCCTTTTGGTCATTCTTGTGACACTAATGATTAAAGTTTTTTATGACACAATTTCATGTTATTGGCTTAATCCATTAAGCATCAAGAAGATTATGGAGAAGCAAGGTGTGTTTTGTCCTAAACCTAGGTTTCTAACAGGCAACCTTAAAGAGATCTCATCTTTTGTCTCTAATGCTACTTCTCAAGACATGGAATCAATCAACCATGATATTGTTGGTCGTCTTTTGCCTCATTTTGTTGCTTGGTCCAAGCAGTATGGAAAAAGATTTTTCTATTGGAATGGAATAGAGCCAAGATTGTGTCTAACAGAAACTGAATTGATCAAGGAATTTCTTTCAAAGTATAGTACAATATCTGGGAAATCATGGCAGCAACAACAAGGATCTAAGAATTTTATAGGAAAAGGTTTGTTGATGGCAAATGGTGATGATTGGTATCACCAACGTCACTTAGTTTCTCCTGCATTCATGGGAGAAAAACTTAAGAGTTATGCTGTACACATGACGGAATGCACTAAAGAAATGCTTGAATCATTACAAAATGCAACATTGGATTGTGACAAAAATGAGGTTGAAATTGGAGAATATTTCACTAAACTCACTGCAGATATTATTTCAAGAACTGAGTTTGGTACAAATTATGAAAAGGGAAAACAAATATTTCATCTTCTCACACAATTACAAGCTCTTTGTGCTCAAGCAACTAGAAAGCTTTGGTTGCCTGGAAGCAGGTTTTTTCCTAGTACTTATAATAGAGAGATCAAGTCATTGAAGATGGAAGTGGAAAGACTGTTGATGGATATAATACAAAGTAGAAAAGATTGTGTGGAAATGGGAAGAAGCAATTCTCATGGGAATGACTTATTGGGAATGCTTTTAGATGAAATTCAAAAGAGTGGAAAATTAAACCTACAACTAGTTATGGATGAATGCAAAACATTCTTCTTTGCTGGACATGAAACAACTGCACTCTTACTCACATGGACTGCTATGTTGTTAGCTTGCAATCCAAGTTGGCAAGAAAAAGTTAGAACTGAAGTTAAAGAGATTTTCAATCAAGGAATGCCTTCTATTGATCAACTCTCCAAGCTCAATGTGTTGCATATGGTAATCAATGAGTCAATGAGGCTCTATCCTCCAGCAACCCTACTCCCTAGAATGGCTTTTCAAGACATTGTTTTAGGTGATCTTTATATTCCTAAAGGCTTATCTGTTTGGATTCCAGTATTGGCCATTCATCATAATGAAGAATTATGGGGAAAAGATGCAAATGAGTTCAATCCACACAGATTTGCTTCAAAATCATTCATGCCTGGTCGTTTCTTACCATTTGCTTCTGGTCCAAGAAACTGTGTTGGACAATCATTTGCTATGATGGAAGCTAAGATTATTCTGGCAATGTTGGTTTCTAGGTTTAGTTTCACTATTTCAAAAAATTATAAACATGCTCCAATCACTGTCCTTACTATTAAGCCTAAATATGGTGTGCAAATTTGTTTGAAGACGTTAGATTGA 1530 0.3549 MMILTTLLVILVTLMIKVFYDTISCYWLNPLSIKKIMEKQGVFCPKPRFLTGNLKEISSFVSNATSQDMESINHDIVGRLLPHFVAWSKQYGKRFFYWNGIEPRLCLTETELIKEFLSKYSTISGKSWQQQQGSKNFIGKGLLMANGDDWYHQRHLVSPAFMGEKLKSYAVHMTECTKEMLESLQNATLDCDKNEVEIGEYFTKLTADIISRTEFGTNYEKGKQIFHLLTQLQALCAQATRKLWLPGSRFFPSTYNREIKSLKMEVERLLMDIIQSRKDCVEMGRSNSHGNDLLGMLLDEIQKSGKLNLQLVMDECKTFFFAGHETTALLLTWTAMLLACNPSWQEKVRTEVKEIFNQGMPSIDQLSKLNVLHMVINESMRLYPPATLLPRMAFQDIVLGDLYIPKGLSVWIPVLAIHHNEELWGKDANEFNPHRFASKSFMPGRFLPFASGPRNCVGQSFAMMEAKIILAMLVSRFSFTISKNYKHAPITVLTIKPKYGVQICLKTLD 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05043 509 Pfam Cytochrome P450 84 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05043 509 Gene3D Cytochrome P450 45 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05043 509 PANTHER CYTOCHROME P450 FAMILY MEMBER 18 500 - -
Vivi2g05043 509 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05043 509 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05043 509 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05043 509 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05043 509 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05043 509 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05043 509 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05043 509 SUPERFAMILY Cytochrome P450 77 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05043 509 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05043 509 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05043 509 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05043 509 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05043 Vivi-Chr2 171501564 171506549 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05043 1 369 Cytochrome P450 AT5G38450 68.000 2.70e-172 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05043 K10717 - gmx:100812567 828.165