Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05025 ATGAGTGATGATGTTAGTGTGAATGGTTCTTCATGTTTAGCAATAACAGAAAAGAAGAACAATGAAAAACATAGTGGTGGTTGTGTTGGTATTTTCTTTCAACTATTTGATTGGAATAGAAGATTCACCAAAAAGAGATTTTTCTCCAAGAAACTTCTTCCTCCTGCTAGTGCAAAACATGATTCTATGAACAAGTTTAAAGGAGATGAGAAAATGCCTAATTCCAAGCTTCATTTGATTGCTAATGCGAACAATGGAGGTTTCTCGAATGCCATGGAAGGAGGAAATTGTGTTGTCGAGGTAGAACGAAAGCATGAAATGAAAGCTCCGAGTATTGTAGCTAGGTTGATGGGTCTAGAATCAATTCCAACTTCAAAGAGAGATCATAAGTCCAAGACATCTTCATATTTTGATAGTGAAGATGGTGAAGAGTCTTTGGAAATCGGAGTTGCGAATGTAAGTCATGACTCAAGGCCTCAGAAGGTAAGGAAAACGGAAGCGAACGAAAAAAGAGCAATGACTAGGTTTGGCGCTGAGGCATTGCAAATCAAGAATGTTTTGTCACAAGTGAGAAAGTGTAATCATCATCACAGTCACCGTCACGCTAAATTTGTTTCACCTTTGAAGAGTCCGAGGGTTTCTTCGGGAAAGAGTGCATCTCGAAGCTCAAGGTTGATAGAAGCAGCTACTAAGATCTTGGAACCTGGCTTCCAGGCTACAAGCAGATCCAAATATTCTCTTATATCATCTGTTTCTAAGTGTCCTCCTAAGAATGGCATTGTCACTGATATGGTTGGAACTCAGGTGGAAGCTATACACAACCGATCGTGTTATAATGTTGGCATAGACAAGTCATTGGTGGAGCATACTTGCAAAAATTGCGGTAATTTGGTTGACGTTGAGATCAACAAACCTACTGTTTCAGATGTTTTCATTGGCTTCTCTTCCGAATCGGCGCTAAAAGGAAGATCATTCAATCCTTCTCACGAAAATGACATAGTTCTTCTCAGAAGTCAAGAGAAGATCATAACTCTTGTTGATGAAGATGTTAAAAAGAATGCTTATTCTTGTAATGAATCTACTTCCAGAAGAATCCACGTTCATGCAAAATGTGATTCTTCTCATCAACCGCCTGGAGGCTTAGAGGATAATGACTTTGAATTCAAAACTCAAACACGAGAAAGGATGTTAAGCGGTGAAAGAATGGCTTTTAGATTTGAAGCTAGAAATAGTAATATGCTGATGAAGAGAGCTTCATCAGCTGCAACTGCAAGCACTGTGAGTGGAAGTAAAGACTTTGTTGGTTTGAATCGTAGGCTAAGTGGACGAACTCGGACGGGGTCTCCTACCAAATTGGATAGCTGCAATTTTGATCTTGAGAGGAAAAAAAGGACTGAAAGTATAGCTTCTGTCAATTTGGTTACATTGAAACATAGAAATGTTGGTTCAAATACACAAGGAGGAAAAAGGAGAAACTTTGACGCTTTCTCTCCAAACAATTCGAACGTCAAATGTAGAAAAAGTGGTTATCAAAAAACCGACAAGATTAACGACAATAAAATCAATAAGGTAGAGACAAGAAGTGCTAATGTGATTAAGACTTGTTTCCAAAGACATCATTCACCCTTGAGAGAAGATGTTTTAGGTGCTTTTCTAGAACAGAAGTTGAAAGAATTGAAATCGAGGAAAAACGAGGAGTTGGCTAATGGCGATCAACCTAGAAGATCAACTGTGTTGATTCTTCAAGAATTGATATCTGTTCTGAATGCAGGCTCAGGGGCTTTTCACACCGGCTCTATAAATTGTTCATACGATCAACCAAAACGGTTTGAGCATGATGTCAAACTCATAGGCTGTAAGATACTGACAGAACTCGCTAACCGAATTCATATGACATTGCAAAGTTTAAACTCTTTTTGGCCAAGATTGACAAAAAGCAAGCTCAATCATATGAAAAATGTCATCTTCATTGCTGAATTGGTTCTTGGAAATGTCACTAGACAAAGAGAGGATCTGCCACAGCTTCTCATTTCTTGCATTCTTGTTGATGAACTCGACAACATGGCAACCGATGCTGTGCGGAGAAATTTCAACCGAAGCCAACTTAAGGGATTTCTCTTTGATTGTGTAATTGAATATCTAGAATCAAATTGCTGCCATAATTATTACAATGTATTTAGTTTATGGTGTGCATGGACAAAGGTTCCTTTCTGCATGAAAGGTGAGATTTTGGTTGAAGAGGTTAAGAGTGAGATTAAAAAGTGGGAAGTTATAGCCGGAATGGAACCTGAAAAAATAATTGATTGGGAGATGAGTCACTCATTGGGAAAATGGACTGATTTCAATGTTGAAGCTTTTGAGTTTGGTGTTGATATTGAGAATTATTTGCTTCAAATTTTGGTTGATGAAATTGTTGAAGACCTTGTAGATTTTAGGCATTGTACTCTTTGA 2451 0.3815 MSDDVSVNGSSCLAITEKKNNEKHSGGCVGIFFQLFDWNRRFTKKRFFSKKLLPPASAKHDSMNKFKGDEKMPNSKLHLIANANNGGFSNAMEGGNCVVEVERKHEMKAPSIVARLMGLESIPTSKRDHKSKTSSYFDSEDGEESLEIGVANVSHDSRPQKVRKTEANEKRAMTRFGAEALQIKNVLSQVRKCNHHHSHRHAKFVSPLKSPRVSSGKSASRSSRLIEAATKILEPGFQATSRSKYSLISSVSKCPPKNGIVTDMVGTQVEAIHNRSCYNVGIDKSLVEHTCKNCGNLVDVEINKPTVSDVFIGFSSESALKGRSFNPSHENDIVLLRSQEKIITLVDEDVKKNAYSCNESTSRRIHVHAKCDSSHQPPGGLEDNDFEFKTQTRERMLSGERMAFRFEARNSNMLMKRASSAATASTVSGSKDFVGLNRRLSGRTRTGSPTKLDSCNFDLERKKRTESIASVNLVTLKHRNVGSNTQGGKRRNFDAFSPNNSNVKCRKSGYQKTDKINDNKINKVETRSANVIKTCFQRHHSPLREDVLGAFLEQKLKELKSRKNEELANGDQPRRSTVLILQELISVLNAGSGAFHTGSINCSYDQPKRFEHDVKLIGCKILTELANRIHMTLQSLNSFWPRLTKSKLNHMKNVIFIAELVLGNVTRQREDLPQLLISCILVDELDNMATDAVRRNFNRSQLKGFLFDCVIEYLESNCCHNYYNVFSLWCAWTKVPFCMKGEILVEEVKSEIKKWEVIAGMEPEKIIDWEMSHSLGKWTDFNVEAFEFGVDIENYLLQILVDEIVEDLVDFRHCTL 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05025 816 MobiDBLite consensus disorder prediction 194 221 - -
Vivi2g05025 816 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 12 807 - -
Vivi2g05025 816 Coils Coil 549 569 - -
Vivi2g05025 816 Pfam Domain of unknown function (DUF4378) 671 803 IPR025486 -
Vivi2g05025 816 Pfam DUF761-associated sequence motif 102 128 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05025 Vivi-Chr2 171155514 171158827 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05025 1 808 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 29.290 1.02e-70 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05025 - - vvo:131624308 1367.83