Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04989 ATGGCTTCTTTTACTATCTCCTTGAATTCCACAACCCTACTTGTGCTTCTCTTGGCTATTGTCTCTTGTCTACAATTTTCCTTTGTAGATTCTCATGAATTTCAAGTTGGTGACCTAAAAGGTTGGGTTGTTCCACCACCCAATGACACTGATATCTACAATATTTGGGCTTCTAACTTCAGGTTCCAAGTTGGTGACTCCATAATTTTCAAGTACAAGAAGGATTCAGTGATGGAAGTTGGAAAAGAAAACTACAATGATTGCAATGCAACACAACCAACATTTTTCTCAAACAATGGTGACACTGAGTTCAAGTTTGGTCATTCAGGAACATTCTACTTCATAAGTGGTGCATCAGGGCATTGTGAGAAAGGACAAAAAATGATTGTGAGAGTGATGATTCAAGATATTCATTCCAAATCTTCTGCCTACCATGTTCCTGTTTTTTCAATTGGTGTCTTTGTTTTTGCATTTGTTGTGTCCTATGTAATTTGA 495 0.3717 MASFTISLNSTTLLVLLLAIVSCLQFSFVDSHEFQVGDLKGWVVPPPNDTDIYNIWASNFRFQVGDSIIFKYKKDSVMEVGKENYNDCNATQPTFFSNNGDTEFKFGHSGTFYFISGASGHCEKGQKMIVRVMIQDIHSKSSAYHVPVFSIGVFVFAFVVSYVI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04989 164 Gene3D - 31 137 IPR008972 -
Vivi2g04989 164 SUPERFAMILY Cupredoxins 31 133 IPR008972 -
Vivi2g04989 164 FunFam Early nodulin-like protein 1 31 137 - -
Vivi2g04989 164 ProSiteProfiles Phytocyanin domain profile. 32 134 IPR003245 GO:0009055
Vivi2g04989 164 PANTHER BLUE COPPER PROTEIN 25 138 IPR039391 GO:0009055
Vivi2g04989 164 Pfam Plastocyanin-like domain 51 126 IPR003245 GO:0009055
Vivi2g04989 164 CDD OsENODL1_like 32 133 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04989 Vivi-Chr2 170683445 170684331 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04989 14 163 Phytocyanin Superfamily AT5G14345 50.667 1.87e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04989 - - lang:109346935 203.371