LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi2g04974	ATGAAGATACTTTGTTTTCACCGCAACTCTGAAATTGTTAACGAAAATTTAAGGGATCATGATACAAAAAACTCTATCCACATTGAAGACAAATTGAGTGATTACGATGATGATCTCTACCAATTCTATCACCAAGAAGAGTGTCAAATTATTCCCAACTCAAAAGGGTACAAAGTTGATAGTGAGATGAGAAGGAATGTGGTAGATTGGTTGATATACTTACATTATGATTTGGAACTCGTGTCGGAAACCCTATATCTTAGTGTCAACATCCTTGATCGGTTTCTCTCAAAAAATAATTTTGAAGTGTCAACCATGAATGAATTTAAACTCATTGGTATCACGTCATTGTTGTTAGCTTCTAAATATGAACAAAGAAGTGAGATTGGTGTTAGCGACCTAGTAGAATACTCTTTTACTCTGGATGAAATATGTGAAATGGAGAATCTTATATTAAAAGAGCTCGGTTGGATTTTAACGGTTCCAACATGTTATATGTTTCTTGGTATAAACTTAAGAACGTGTCTTTTATCTGATAAAGACAAGATCATGGAAAACATGGTGCTTTTCTTCTCTGAGCTGAGTTTGACGCATTATCAAATTGTGTGTGATTATAAGCCTTCTGTAATTGTTGCTTCTGCGGTGTATTGTGCGAGAAATGTTATTGGAAGATATCCTCTATGGAGTAATGAGTTGAAGTTGTGTTGTGGATACTCCGAAGAGAATTTAAGTTCTTGTGCTAAGGTTATGATGGATTTGCGTAATGAAATTTGTAGAGATGGAAGCATGCATGTTTTTAAGAAATTTTCAAGTTTAATAGGATAG	825	0.3418	MKILCFHRNSEIVNENLRDHDTKNSIHIEDKLSDYDDDLYQFYHQEECQIIPNSKGYKVDSEMRRNVVDWLIYLHYDLELVSETLYLSVNILDRFLSKNNFEVSTMNEFKLIGITSLLLASKYEQRSEIGVSDLVEYSFTLDEICEMENLILKELGWILTVPTCYMFLGINLRTCLLSDKDKIMENMVLFFSELSLTHYQIVCDYKPSVIVASAVYCARNVIGRYPLWSNELKLCCGYSEENLSSCAKVMMDLRNEICRDGSMHVFKKFSSLIG	274

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi2g04974	274	SUPERFAMILY	Cyclin-like	161	271	IPR036915	-
	Vivi2g04974	274	PIRSF	Cyclin_A_B_D_E	5	272	IPR046965	GO:0016538\|GO:0044772
	Vivi2g04974	274	SMART	Cyclin_C_2	162	273	IPR004367	-
	Vivi2g04974	274	PANTHER	CYCLINS	31	251	IPR039361	-
	Vivi2g04974	274	Pfam	Cyclin, C-terminal domain	162	270	IPR004367	-
	Vivi2g04974	274	SMART	cyclin_7	69	153	IPR013763	-
	Vivi2g04974	274	SMART	cyclin_7	166	252	IPR013763	-
	Vivi2g04974	274	FunFam	G2/mitotic-specific cyclin	50	160	-	-
	Vivi2g04974	274	ProSitePatterns	Cyclins signature.	64	95	IPR006671	-
	Vivi2g04974	274	Gene3D	-	53	154	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi2g04974	Vivi-Chr2	170466995	170467819	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi2g04974	24	250	Core Cell Cycle Gene Families	AT4G37490	37.872	8.96e-47	160

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi2g04974	K21777		-	pvy:116109980	180.259

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