Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04974 ATGAAGATACTTTGTTTTCACCGCAACTCTGAAATTGTTAACGAAAATTTAAGGGATCATGATACAAAAAACTCTATCCACATTGAAGACAAATTGAGTGATTACGATGATGATCTCTACCAATTCTATCACCAAGAAGAGTGTCAAATTATTCCCAACTCAAAAGGGTACAAAGTTGATAGTGAGATGAGAAGGAATGTGGTAGATTGGTTGATATACTTACATTATGATTTGGAACTCGTGTCGGAAACCCTATATCTTAGTGTCAACATCCTTGATCGGTTTCTCTCAAAAAATAATTTTGAAGTGTCAACCATGAATGAATTTAAACTCATTGGTATCACGTCATTGTTGTTAGCTTCTAAATATGAACAAAGAAGTGAGATTGGTGTTAGCGACCTAGTAGAATACTCTTTTACTCTGGATGAAATATGTGAAATGGAGAATCTTATATTAAAAGAGCTCGGTTGGATTTTAACGGTTCCAACATGTTATATGTTTCTTGGTATAAACTTAAGAACGTGTCTTTTATCTGATAAAGACAAGATCATGGAAAACATGGTGCTTTTCTTCTCTGAGCTGAGTTTGACGCATTATCAAATTGTGTGTGATTATAAGCCTTCTGTAATTGTTGCTTCTGCGGTGTATTGTGCGAGAAATGTTATTGGAAGATATCCTCTATGGAGTAATGAGTTGAAGTTGTGTTGTGGATACTCCGAAGAGAATTTAAGTTCTTGTGCTAAGGTTATGATGGATTTGCGTAATGAAATTTGTAGAGATGGAAGCATGCATGTTTTTAAGAAATTTTCAAGTTTAATAGGATAG 825 0.3418 MKILCFHRNSEIVNENLRDHDTKNSIHIEDKLSDYDDDLYQFYHQEECQIIPNSKGYKVDSEMRRNVVDWLIYLHYDLELVSETLYLSVNILDRFLSKNNFEVSTMNEFKLIGITSLLLASKYEQRSEIGVSDLVEYSFTLDEICEMENLILKELGWILTVPTCYMFLGINLRTCLLSDKDKIMENMVLFFSELSLTHYQIVCDYKPSVIVASAVYCARNVIGRYPLWSNELKLCCGYSEENLSSCAKVMMDLRNEICRDGSMHVFKKFSSLIG 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04974 274 SUPERFAMILY Cyclin-like 161 271 IPR036915 -
Vivi2g04974 274 PIRSF Cyclin_A_B_D_E 5 272 IPR046965 GO:0016538|GO:0044772
Vivi2g04974 274 SMART Cyclin_C_2 162 273 IPR004367 -
Vivi2g04974 274 PANTHER CYCLINS 31 251 IPR039361 -
Vivi2g04974 274 Pfam Cyclin, C-terminal domain 162 270 IPR004367 -
Vivi2g04974 274 SMART cyclin_7 69 153 IPR013763 -
Vivi2g04974 274 SMART cyclin_7 166 252 IPR013763 -
Vivi2g04974 274 FunFam G2/mitotic-specific cyclin 50 160 - -
Vivi2g04974 274 ProSitePatterns Cyclins signature. 64 95 IPR006671 -
Vivi2g04974 274 Gene3D - 53 154 - -
Vivi2g04974 274 Gene3D - 155 272 - -
Vivi2g04974 274 Pfam Cyclin, N-terminal domain 38 159 IPR006671 -
Vivi2g04974 274 SUPERFAMILY Cyclin-like 33 157 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04974 Vivi-Chr2 170466995 170467819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04974 24 250 Core Cell Cycle Gene Families AT4G37490 37.872 8.96e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04974 K21777 - pvy:116109980 180.259