Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04972 ATGCCGACGGTAGCCGTGAAACTCTACAGCGTGTTCTTCAAGTTTCTGTTAAAACACCGTTTACAGAATCGGATTCAAACTCCGACCGAAGAATCCGCCCCGTTCGGTATAACTTCCCGACCCGACGAATCTTTAGCTTCGCCTAATCCTTCTTTCACCGAAGGCGTGGCCACCAAAGATATTCATATTGATTCTTTCACTTCTCTTTCGGTTCGAATCTTTCTCCCTGAATCTGCATTGTTGACTCCCGAACCTAATTCCAAACCTAAACGAAAACCCGAACCTAAGGGACGTGAAACGACGTCGTCGCCGAGGGTTAATAGGAGGAACAGTTATGGTCCGGTTGGTGCTCCGGTGAAGGAGGAGGTGAGAAGGAATAGTGTCGGCGGTGGTGATGCGGAGGGTTTGAATTTGAGTTCCGGTGGTGGTTATGGTGGTTATTCGCCGACGATTGATGATAGGAAGAGGAAGTTGCCGGTGATGGTGCAGTTTCATGGAGGTGGTTGGGTGAGTGGGAGTAATGATTCGGTGGCGAATGATTATTTTTGTAGGAGGATTGCGAAGCTTTGTGATGCGGTGGTTGTTGCGGTTGGTTATCGGCTTGCGCCGGAGAGTCGGTATCCGGCGGCTTTTGAGGATGGATTTAAGGTTTTGAGTTGGTTGGGGAAACAAGCGAATTTGGCTGAGTGTAGTAGGTCGTTGGGGATTAAGAAATTGGATGGTGGTCATAGGCATATTGTTGATTCTTTTGGTGCTTCTATGGTTGAACCTTGGTTGGCTGCACATGGAAATCTATCTAGGTGTGTGCTTCTTGGTGTGAGTTGTGGAGCAAATATTGCAAACTATGTAGCTCAAAAAGCTGTAGAAACAGGCAAACTTCTGGACCCTGTCAAAGTGGTGGCACAGATCCTGATGTATCCGTTCTTTGTCGGAAGTGTACCCACGCATTCTGAAATAAAGTTGGCAAACTCTTATTTTTATGACAAAGCTATGTGTATGCTGGCATGGAAACTATTCCTACCCGAGAAAGAATTTAGCCTAGACCATCCAGCAGCCAATCCCCTAGTCCCAGGCCACGGACCTCCTTTAAAGCAGATGCCTCCAACATTAACAGTAGTGGCGGAACATGACTGGATGAGAGACCGTGCCATAGCTTACTCAGAGGAGCTTAGGAAGGTGAATGTTGATGCACCGGTTCTTGAATATAAAGACGCAGTTCATGAATTTGCTACACTAGATGTACTTCTCAGAAGCCCTCAAGCTCAGGTTTGTGCGGAGGACATTGCCATCTGGGTCAAGAAGTACATTTCACTTCGAGGGCATGAATTCTCATATTGA 1338 0.4701 MPTVAVKLYSVFFKFLLKHRLQNRIQTPTEESAPFGITSRPDESLASPNPSFTEGVATKDIHIDSFTSLSVRIFLPESALLTPEPNSKPKRKPEPKGRETTSSPRVNRRNSYGPVGAPVKEEVRRNSVGGGDAEGLNLSSGGGYGGYSPTIDDRKRKLPVMVQFHGGGWVSGSNDSVANDYFCRRIAKLCDAVVVAVGYRLAPESRYPAAFEDGFKVLSWLGKQANLAECSRSLGIKKLDGGHRHIVDSFGASMVEPWLAAHGNLSRCVLLGVSCGANIANYVAQKAVETGKLLDPVKVVAQILMYPFFVGSVPTHSEIKLANSYFYDKAMCMLAWKLFLPEKEFSLDHPAANPLVPGHGPPLKQMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLLRSPQAQVCAEDIAIWVKKYISLRGHEFSY 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04972 445 MobiDBLite consensus disorder prediction 87 103 - -
Vivi2g04972 445 Gene3D alpha/beta hydrolase 37 439 IPR029058 -
Vivi2g04972 445 MobiDBLite consensus disorder prediction 80 139 - -
Vivi2g04972 445 MobiDBLite consensus disorder prediction 29 52 - -
Vivi2g04972 445 PANTHER ARYLACETAMIDE DEACETYLASE 40 410 - -
Vivi2g04972 445 Pfam alpha/beta hydrolase fold 161 410 IPR013094 GO:0016787
Vivi2g04972 445 SUPERFAMILY alpha/beta-Hydrolases 48 436 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04972 Vivi-Chr2 170454003 170458066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04972 1 445 Carbohydrate Esterase AT3G27320 70.769 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04972 - - qsa:O6P43_004761 703.745