Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04965 ATGGTTGTGGATCCCTCTTTTCCTCAACCATCCAAAAGAAGAAGAATCAACCACTTTTATTCCACGGCAACAATTACAGAGATGAGTGAAAGATTTGGACGGGAGATTCGTGTTTTTGAGACATTTTCACTTTCTCCAACTCAAAATGATGCAGCAAACAAAGAGGAGGAGTCCGATGAGTTCTACGAGTTCACTGCTGCAGATTATTATAAACTCTTGGGTACTAAAAAAGAAGATAAATATCTAAAGACTCGAAAACTCCGAGAAGCAGATGAGGCAGCTCGCAGGTCAAAAATAACAAAGGCTGTAATTAGAGTTCGCTTCCCTGATAATCATACCTTGGAAGCTACCTTTCATCCATCAGAAACCATCCAAAGTTTAATCGATCTCCTCAACAAAGTGATTGCACAACCAGAGAAATCCTTTTATTTATATACTACTCCGCCGAAGAAGCTGATCAAAGACTTTTCTCAGGATTTCTATACGGTTGGATTTTGTCCTGGTGCCATTGTGTACTTTTCATATGATGTTTCAAAAGGTAATAGCAGCGATGACGGCCCTTACCTACTAGAAGAAGTGATGTCTTTGAAAGGTGCTATAGAACAAGGTGAGTCGTCGGAGCCATTACAGTCTGAACCGGTGTCTGCTGAGCCTGTTGTGCAAGCTCCTGCCGTCGAAGAACGGAAACCGGCCGAGAAAAAGATTGTTAAGCCAAAGTGGTTGAAAATGTGA 732 0.4153 MVVDPSFPQPSKRRRINHFYSTATITEMSERFGREIRVFETFSLSPTQNDAANKEEESDEFYEFTAADYYKLLGTKKEDKYLKTRKLREADEAARRSKITKAVIRVRFPDNHTLEATFHPSETIQSLIDLLNKVIAQPEKSFYLYTTPPKKLIKDFSQDFYTVGFCPGAIVYFSYDVSKGNSSDDGPYLLEEVMSLKGAIEQGESSEPLQSEPVSAEPVVQAPAVEERKPAEKKIVKPKWLKM 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04965 243 Gene3D - 91 173 - -
Vivi2g04965 243 ProSiteProfiles UBX domain profile. 97 173 IPR001012 GO:0005515
Vivi2g04965 243 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 1 243 IPR044232 GO:0032984|GO:0051117
Vivi2g04965 243 Pfam UBX domain 99 167 IPR001012 GO:0005515
Vivi2g04965 243 SUPERFAMILY Ubiquitin-like 77 173 IPR029071 -
Vivi2g04965 243 CDD UBX2_UBXN9 102 175 - -
Vivi2g04965 243 MobiDBLite consensus disorder prediction 201 243 - -
Vivi2g04965 243 MobiDBLite consensus disorder prediction 226 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04965 Vivi-Chr2 170253418 170257701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04965 13 122 C2H2 Transcription Factor Family AT2G01650 30.172 1.29e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04965 K15627 - gmx:100818386 321.242