Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04909 ATGGAAACCGGTTCATCTTCTTCACCTCAACAGAGCCAGAGCGAGGCTAATGCCAATGGACAGAAACCGAATCGTAACAATAAAAACGGAGTTCGAGTTGTTGGTAACAGAATTTATGATTCTGAAAATGGCCAAACTTGTCATCAGTGCCGGCAAAAGACAAGGGATTTTTGTGCTGTATGCAAGAATCCAAGGAATGGGAACCCTTGTACCCTTAGGATCTGTCACAAGTGCCTATTGAATAGATATGGGGAAAAGGCAGAAGAGGTTGCATTATTGAATGATTGGATGTGTCCTAAGTGCAGAGGCATTTGTAACTGCAGTCTTTGCAGGAAACAACATGGTCAAGATCCAACTGGTATGCTAGTTCATAAAGCCAAGAAATCCGGTTTTAACTCCGTATCAGATATGCTTAGCAAGAAGGCTTCCGAAGGTTTGGAATTGAACAGTGCTGCTGTTTTGCCTGAAAAGGAAGCTACTTTGAAAAAGGAGCTTGTATTGGGTCTATCAGGGGAACATGGGAAGGAAAACACCTTAGGTGGAAATGATGCTTTAAAGGTCGGTCATAAGAAAAGCAAAAAAGTGAAGCGAGAAAACTTAAAGGAAATATCTAATGGCAGCAGTGTTAATGATGTTTGCCAGAACAAAAAATCAAAAAAGCCTAAACTGTGTAATGGAGTTTCAGACGGTGAAGTGAAAAGAAGTGCAGATAATAAACTGGAAACAAAAGTTGAGGAGGCTCATGAAAAACTTAAGGAAGAGATTCCTTTACCCATTGGCACTGAAATTACAAAAATATTAGACATTGATCTTGCACCAGAAGATGTTGGGAATGCATTGCAGTTTTTAGAATTCTGCAGAGTGTTTGGAAAGGCTCTTGATATCAAGAAAGGAGAGGCGGAAGCTGTTTTAAGAGCACTGATACGCAAGCAAAATTTGCGACGTGGACAAAATACCTTAGTTGTTGACTTTCAAATCAAACTATTGACTTTTATAGTATCTGATTCAGAAATGGAGTCTTCGTCCTTGACTGCTAGCGGTGGAAAAAATTCATGGTTGAAAGTTCTTGTGGAATTGATTACTGAGTCTGATCTTGTGCTAAAAGAAATTCCTTTGGATTGGCTTAGTAAAGGAATTAGTGGATATTATGATTTGGACTTGTCGAAAAAGCTTATCCTTCTGAATTTTATCTGTGATGAAGCTCTGGGCACAACGAAGCTAAGGAGTCATATCGATGATGAAAATGAAAGATTTGCTGAAGAAAAAAAAGCAGCAAAATCCAAGGTTGCTGAAGCTAAGGGAAAGGAAAAAAGTCTTAAGCAAAAGCTGCAAGACGAGATAGCAAAAGCCGCTGTATCAAATGGAGCTAACCTATCAGTTTCAGAACATGATGCTCTTCTTGCAACAATAAAAAGTGAAGCTGCTAAAGCTCATGATGAGTTGATTGAGGCAAAGGGCACAGTTCCTAAAGGGAACCAATGTTGTGATGCAGTGAGAATTGAACATCAGTACAGGGATAACAGTGGCAAGTCATTCTGGAAATTAAAAAGCTGCGAAGATGAATATGTTTTCTTGTTACAAGATAGCAAGATCGAAGGTGAAGATGATGTCAAAGTTGATGAAAAATGGTCTGCTTATGGAGCCGAGCAGAAAGACGAGGTCAATAAGTACATTTCCTCTAGGAGAGATTGGTAA 1695 0.3935 METGSSSSPQQSQSEANANGQKPNRNNKNGVRVVGNRIYDSENGQTCHQCRQKTRDFCAVCKNPRNGNPCTLRICHKCLLNRYGEKAEEVALLNDWMCPKCRGICNCSLCRKQHGQDPTGMLVHKAKKSGFNSVSDMLSKKASEGLELNSAAVLPEKEATLKKELVLGLSGEHGKENTLGGNDALKVGHKKSKKVKRENLKEISNGSSVNDVCQNKKSKKPKLCNGVSDGEVKRSADNKLETKVEEAHEKLKEEIPLPIGTEITKILDIDLAPEDVGNALQFLEFCRVFGKALDIKKGEAEAVLRALIRKQNLRRGQNTLVVDFQIKLLTFIVSDSEMESSSLTASGGKNSWLKVLVELITESDLVLKEIPLDWLSKGISGYYDLDLSKKLILLNFICDEALGTTKLRSHIDDENERFAEEKKAAKSKVAEAKGKEKSLKQKLQDEIAKAAVSNGANLSVSEHDALLATIKSEAAKAHDELIEAKGTVPKGNQCCDAVRIEHQYRDNSGKSFWKLKSCEDEYVFLLQDSKIEGEDDVKVDEKWSAYGAEQKDEVNKYISSRRDW 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04909 564 SMART testlast3 273 338 IPR018501 -
Vivi2g04909 564 MobiDBLite consensus disorder prediction 178 197 - -
Vivi2g04909 564 MobiDBLite consensus disorder prediction 1 31 - -
Vivi2g04909 564 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 39 138 IPR018866 -
Vivi2g04909 564 ProSiteProfiles DDT domain profile. 273 338 IPR018501 -
Vivi2g04909 564 PANTHER OS05G0300700 PROTEIN 17 498 IPR040221 GO:0006355
Vivi2g04909 564 MobiDBLite consensus disorder prediction 1 32 - -
Vivi2g04909 564 Coils Coil 415 449 - -
Vivi2g04909 564 Pfam DDT domain 274 335 IPR018501 -
Vivi2g04909 564 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 381 412 IPR028942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04909 Vivi-Chr2 169139614 169144388 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Vivi2g04909 zf-4CXXC_R1 7.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04909 - - mtr:25495611 733.406