Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04908 ATGGAAACCGGTTCATCTTCTTCACCTCAACAGAGCCAGAGCGAGGCTAATGCCAATGGACAGAAACCGAATCGTAACAATAAAAACGGAGTTCGAGTTGTTGGTAACAGAATTTATGATTCTGAAAATGGCCAAACTTGTCATCAGTGCCGGCAAAAGACAAGGGATTTTTGTGCTGTATGCAAGAATCCAAGGAATGGGAACCCTTGTACCCTTAGGATCTGTCACAAGTGCCTATTGAATAGATATGGGGAAAAGGCAGAAGAGGTTGCATTATTGAATGATTGGATGTGTCCTAAGTGCAGAGGCATTTGTAACTGCAGTCTTTGCAGGAAACAACATGGTCAAGATCCAACTGGTATGCTAGTTCATAAAGCCAAGAAATCCGGTTTTAACTCCGTATCAGATATGCTTAGCAAGAAGGCTTCCGAAGGTTTGGAATTGAACAGTGCTGCTGTTTTGCCTGAAAAGGAAGCTACTTTGAAAAAGAACAAAAAATCAAAAAAGCCTAAACTGTGTAATGGAGTTTCAGACGGTGAAGTGAAAAGAAGTGCAGATAATAAACTGGAAACAAAAGTTGAGGAGGCTCATGAAAAACTTAAGGAAGAGATTCCTTTACCCATTGGCACTGAAATTACAAAAATATTAGACATTGATCTTGCACCAGAAGATGTTGGGAATGCATTGCAGTTTTTAGAATTCTGCAGAGTGTTTGGAAAGGCTCTTGATATCAAGAAAGGAGAGGCGGAAGCTGTTTTAAGAGCACTGATACGCAAGCAAAATTTGCGACGTGGACAAAATACCTTAGTTGTTGACTTTCAAATCAAACTATTGACTTTTATAGTATCTGATTCAGAAATGGAGTCTTCGTCCTTGACTGCTAGCGGTGGAAAAAATTCATGGTTGAAAGTTCTTGTGGAATTGATTACTGAGTCTGATCTTGTGCTAAAAGAAATTCCTTTGGATTGGCTTAGTAAAGGAATTAGTGGATATTATGATTTGGACTTGTCGAAAAAGCTTATCCTTCTGAATTTTATCTGTGATGAAGCTCTGGGCACAACGAAGCTAAGGAGTCATATCGATGATGAAAATGAAAGATTTGCTGAAGAAAAAAAAGCAGCAAAATCCAAGGTTGCTGAAGCTAAGGGAAAGGAAAAAAGTCTTAAGCAAAAGCTGCAAGACGAGATAGCAAAAGCCGCTGTATCAAATGGAGCTAACCTATCAGTTTCAGAACATGATGCTCTTCTTGCAACAATAAAAAGTGAAGCTGCTAAAGCTCATGATGAGTTGATTGAGGCAAAGGGCACAGTTCCTAAAGGGAACCAATGTTGTGATGCAGTGAGAATTGAACATCAGTACAGGGATAACAGTGGCAAGTCATTCTGGAAATTAAAAAGCTGCGAAGATGAATATGTTTTCTTGTTACAAGATAGCAAGATCGAAGGTGAAGATGATGTCAAAGTTGATGAAAAATGGTCTGCTTATGGAGCCGAGCAGAAAGACGAGGTCAATAAGTACATTTCCTCTAGGAGAGATTGGTAA 1542 0.393 METGSSSSPQQSQSEANANGQKPNRNNKNGVRVVGNRIYDSENGQTCHQCRQKTRDFCAVCKNPRNGNPCTLRICHKCLLNRYGEKAEEVALLNDWMCPKCRGICNCSLCRKQHGQDPTGMLVHKAKKSGFNSVSDMLSKKASEGLELNSAAVLPEKEATLKKNKKSKKPKLCNGVSDGEVKRSADNKLETKVEEAHEKLKEEIPLPIGTEITKILDIDLAPEDVGNALQFLEFCRVFGKALDIKKGEAEAVLRALIRKQNLRRGQNTLVVDFQIKLLTFIVSDSEMESSSLTASGGKNSWLKVLVELITESDLVLKEIPLDWLSKGISGYYDLDLSKKLILLNFICDEALGTTKLRSHIDDENERFAEEKKAAKSKVAEAKGKEKSLKQKLQDEIAKAAVSNGANLSVSEHDALLATIKSEAAKAHDELIEAKGTVPKGNQCCDAVRIEHQYRDNSGKSFWKLKSCEDEYVFLLQDSKIEGEDDVKVDEKWSAYGAEQKDEVNKYISSRRDW 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04908 513 MobiDBLite consensus disorder prediction 1 31 - -
Vivi2g04908 513 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 39 138 IPR018866 -
Vivi2g04908 513 Coils Coil 364 398 - -
Vivi2g04908 513 SMART testlast3 222 287 IPR018501 -
Vivi2g04908 513 MobiDBLite consensus disorder prediction 1 32 - -
Vivi2g04908 513 ProSiteProfiles DDT domain profile. 222 287 IPR018501 -
Vivi2g04908 513 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 330 361 IPR028942 -
Vivi2g04908 513 PANTHER OS05G0300700 PROTEIN 17 447 IPR040221 GO:0006355
Vivi2g04908 513 Pfam DDT domain 223 284 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04908 Vivi-Chr2 169139614 169144388 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Vivi2g04908 zf-4CXXC_R1 6.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04908 - - tpra:123894964 563.918