Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04895 ATGGATCCTCCACGCCGAGCACCCCGCACCATAATCGACCCCGTCCCTAAATTCCGTCAAGTCGGTTTCTTCGCTCCCGGAGCCCCACCCGATCGCTCTCTATCGGGTCCACCCGACCCGACTCACTCTTCTCACCCTATCGCCGACACCTCCGCTTCTCTTTCACCCGTTATGATCCCTCCGCCGCGTCATCTTTCTGATAACCTAGCTCTTCACGCTCGTTCCGCCGCTTTGCCTCGCCGTGCTGAGTCGATTACTGTTGGGGGAAGTAACTCTGATGCTCCCGTTTCGCCGGCGCCGTCGTCTTCGTATTCGAGTAGGGTTGTTGTTGGTGGTGACCGAGGGTTTTTTGATGGGAAGGGGAATGATGCTGGGAAAGTTGTGGCGTCTTCGTTTCCGAGAGGGGGGTTTGATTTGACGGCGTTGAAGGGGAATGGTGGTGGTGTTGTTGTTCCGGCGAGTGGGTTGACTACTGTTTCTGTTGTTAATGATTCGCTTGGGATTCCTGAAAAAGAAAAAGCAAACAAAGGAGGAGGATCAGCTGGGGAAATGAAAGACCAATCTACTAATTCAAAACAGGAGAAACCAAAACCCACAAAAGCTGAAAGACGTGCAATTCAAGAAGCTCAACGAGCTGCAAAGGCTGCTGCGAAAGGCGAAGGAAATAAGGCGTCTGCAACTGCTGCATCAGTGAATGCAAAACCCGCTAAAGCAGTAAAGCAAGCACAAAAAGCTGATAATGCATCAGTTGCAGCCTCTGAGAAGAAGGGGAGTGATTTCTCCCATGAAAAAGATAGAAAGAAAGATGCTCCTCAACCGCGCTTGCAGTATGATGACAAGAGCCGGGTGGAGAAAGCTAAACGTCGTTCTGTAGTGAAACACACTGAGGCTAGGAACAGAGTTGAGTTATTCAGGCATTTACCACAATATGAACATGGGAGTCAGCTTCCAGATCTTGAGGCAAAGTTTTTCGATCTTGAGGCGTTGCATCCTGCTGTTTATAAGGTTGGTTTGCAGTACATATCTGGAGATATATCTGGTGGCAATGATCGTTGTATTGCAATGCTCCAAGCATTTCAAGAGGCCATCAAAGACTACAAGGTTCCACCTGAGAAGAGTCTTGGGAGAGATTTGACAGCAAAAATTGGCAGTTATGTATCATTTCTTAATGAGTGCCGACCTCTGTCAATCAGCATGGGAAATGCAATTAGATTTCTCAAGAGTCAGATAGCCAAGCTACCTTTAACCTTGTCTGAGGCAGAAGCAAAAACTTCTCTCCAGTCAGATATTGAGCGTTTTATCAGTGAAAAGATCATACTTGCCAACAAGGTGATAGTCAAGCACGCTGTCACCAAAATAAGAGATGGGGATGTTCTTCTAACATACGGGTCATCATTGGCAGTTGAAATGATTCTCTTACATGCACACGAATTAGGAAAACAATTTCGTGTTGTGATAGTTGACTCTCGTCCAAAGCTTAGAGGCCAACAGTTACTCCGCAGGCTTGTGGAGAAAGGTCTTAACTGTACATACACTCATATAAATGCTGTTTCTTACATAATGCATGAAGTTAGTCGAGTTTTTCTGGGTGCTGAATCGATACTTTCTAACGGAACGGTATATTCAAGAGTGGGGACTGCAAGTGTTGCAATGGTTGCTCATGCATCTCGTGTACCAGTCATAGTATGCTGTGAGGCCTATAAATTTCATGAAAGGGTACAGCTAGATTCAATTTGCTCGAATGAACTTGGTGATCCAGATGCCATTTCAAATGTTCAGGGTAGAGTGGATGTCAACCACTTGGATGGTTGGTCCGATATTGAAAATCTGCAACTTCTAAATCTGATTTATGATGCAATGCCTTCAGATTACGTTTCAATGATAGTCACAGATTATGGCATGGTTCCTCCCACAAGTGTACCTGTAATTGTAAGAGAATATGGGAGAGAACAGGTCTGGATATAA 1965 0.457 MDPPRRAPRTIIDPVPKFRQVGFFAPGAPPDRSLSGPPDPTHSSHPIADTSASLSPVMIPPPRHLSDNLALHARSAALPRRAESITVGGSNSDAPVSPAPSSSYSSRVVVGGDRGFFDGKGNDAGKVVASSFPRGGFDLTALKGNGGGVVVPASGLTTVSVVNDSLGIPEKEKANKGGGSAGEMKDQSTNSKQEKPKPTKAERRAIQEAQRAAKAAAKGEGNKASATAASVNAKPAKAVKQAQKADNASVAASEKKGSDFSHEKDRKKDAPQPRLQYDDKSRVEKAKRRSVVKHTEARNRVELFRHLPQYEHGSQLPDLEAKFFDLEALHPAVYKVGLQYISGDISGGNDRCIAMLQAFQEAIKDYKVPPEKSLGRDLTAKIGSYVSFLNECRPLSISMGNAIRFLKSQIAKLPLTLSEAEAKTSLQSDIERFISEKIILANKVIVKHAVTKIRDGDVLLTYGSSLAVEMILLHAHELGKQFRVVIVDSRPKLRGQQLLRRLVEKGLNCTYTHINAVSYIMHEVSRVFLGAESILSNGTVYSRVGTASVAMVAHASRVPVIVCCEAYKFHERVQLDSICSNELGDPDAISNVQGRVDVNHLDGWSDIENLQLLNLIYDAMPSDYVSMIVTDYGMVPPTSVPVIVREYGREQVWI 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04895 654 Gene3D - 440 647 IPR042529 -
Vivi2g04895 654 Pfam Initiation factor 2 subunit family 345 637 IPR000649 GO:0044237
Vivi2g04895 654 MobiDBLite consensus disorder prediction 167 292 - -
Vivi2g04895 654 MobiDBLite consensus disorder prediction 256 292 - -
Vivi2g04895 654 MobiDBLite consensus disorder prediction 188 209 - -
Vivi2g04895 654 MobiDBLite consensus disorder prediction 37 51 - -
Vivi2g04895 654 MobiDBLite consensus disorder prediction 19 61 - -
Vivi2g04895 654 SUPERFAMILY NagB/RpiA/CoA transferase-like 302 647 IPR037171 -
Vivi2g04895 654 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 50 651 - -
Vivi2g04895 654 MobiDBLite consensus disorder prediction 86 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04895 Vivi-Chr2 168938442 168944000 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04895 5 654 Eukaryotic Initiation Factors Gene Family AT5G38640 63.158 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04895 K03680 - gmx:100775998 965.296