Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04891 ATGGATTACAACAGTTGGTTTCCCGTGGCATATGAAAGAAAGGCTTATGGCACATTAAGAAATTATTCACCAGTTTTCTCCGACAATATACGAAAGAGCGGCTTTGATGAATCATGCAATCAACCTGTTGGATTTTCCACCGACTGGCGTGATCATCCTCTCCGCGATGGTGCTGCTTCAAGGGAAGAATATATGAACCTGGAGACATTGCCTCGCCGAGCTGTATCGGACAATTCTAAAGCTCATGTCACTGGTTATTATAGCATGCCAAAAGGGGGACAATATGACACTTCTACTGTTCATGACCTGCCTTGTTTTCCTGATGACCGTTCATCAATCCCCCTAGTTGCTAATATGGATGTGGGTAGTAACTTACCTGTTTATGGTGGTGAAAGCTATCTGGATGCTAACACCAGATATATTAAAAACTATTTTCCTCATCATCAACACACAAATAATTGTGATACCGACATACAACAACCTGCCAAAAGAAAAAAAATGATTTGTGGATTTTCCAATCCTTTTCCTGGCTGGAAGTCTTGTTTAGAATCGCAAGATGCATGGAAATATCTACCACAAATGCTGGATTTTCAGAAGAGCTCTATTCTAAGACATGATGTTAATGATGTCTTGGCTGGTAATACCGAACCTCTTCCAGTACTACCTTATTCCTTGAATAATGATCAATGGAATAACCAGTTGGTTCAACCTTATTCCTCTCAAACACCTTTGGAAGTGTCACAACAGTTACAATTTCCCCCCTTCTCTTCTATCAATTTTGCGAACAATGGGGAAGAACTTACAAATCCGATGTTTCATTCTACGAGACTCAGAGGGATAAACAACAATGAGGCAGGTGATACACTTGAACAGATCTTTGAGGAGCCAAGCCTCGAAAGCGATGATGTGATGGAAATCAGCTCAGAGGAATTTGCCTTTAGTTTGAAATCCAGGATGCGTACTCTCGACATGGATCCTTTAGATACTGGTGGAGAGGTTATGCAGGGCATAGCTGAATTCGACCGTGGCATTACATTGAACTCCAACCTTCCTACTCTCACCGAGGATGTTTTTCTTATTGATGGGGAAGATATACAAGACACAACTGAGTTCTGGACAAACACCAAAAAGAAAGTTGATGAGCCAACAACTGATCAAGAGACACATACCAAGTGCTCAAATACTACTATGCATGCTCTCAAAAGCAAGGTTCCTATTACTATTGATGTAGAGGACAAACATGACATAATTGGATTCAACCAAGAGGAGAAAGTTGTTAAAAGGAAAGTCAGTGACCCAAAAGCTGTCGTTGATGTTGTTTCCTTGATTGACTTTTTCACACATGATCAAATAACAGAACATATTAATAGTCTGAGAAAGGAACCTCTTCAGATTTCAACTGAAGATGGAACTGGAATTGATGCAAATACATGCCAATTATGCGAAAGGGAAAAGCTTTACTTTTCACCGGTGCCAATTTTTTGTATATGCTGTGGCCGCTCCATCGGGAGAAGAAAAATATATTTCTGTAGAAAAGATGAGGAATTTGATGCAGAGCGTTGCTTTTGCTCCTCCTGTTATAATGCATCTAAAGGCGGGTGCATTCCATTCAACGGGACATTTGTTTCTAAGGCAAATCTTGAAAAAAAGACAAATGATGAAGTACTTGAAGAACCGTGGGTTGAATGCAATAAATGCAAAAGATGGCAGCATCAAGTATGTGCACTCTACAACAACAGAAAAGATTTGGACTGCGATGTAGATTATATATGTGCTGTATGCCGCTTGAGAGAAATTGAAGATGGAGTGCATGTTCCCTTACAAAAGACTACTGTTTATGGTGCTAAGGACTTACCAAGTACCAAGCTTAGTGACCACTTGGAGAAAAGACTTTTTAAGCGTCTTATGGAAGTGAAAGTAGATGGGGGAAAAGTTAAAGGAAGTGAGAATCTTGATAAGGTTTTAGCAGCAGAAAGTATTTCTATTAGAGAAGTGTTATCGGTCGACAAACAATTGAAAGTGAAGAAGCAGTTTCTTGACATCATCCCAGAAAAGAATTACCCGACTGAATTTTCTTATAGATTAAGAGTTATACTTCTGTTTCAGAAGATTGATGGAGCAGATATATGCATTTTTGGACTGTACGTCCAGGAGTTTGGCTCTGAATGTGGCAATCCGAATCAGCGTTGTGTGTACATTTCATATCTTGATTCCGTCAAATATTTTAGGCCTGAAAGAGTGATTGTGGAAGGAGAAGCACTTCGTACCTTCGTTTACCATGAGATATTGATTGGATACCTTGATTTTTGTAAGAAAAGGGGTTTCTCAACTTGCCACATATGGGCATGTCCTCCTTCAAAAAGGAATGATTATATACTATATTGTCATCCCAAAGAGCAAAAGACTCCAAACAATGATAAGCTACGCTCTTGGTATCTTTCAATGCTGAAAAAGGCTACTGAAGAAAAAATTGTTGTTGGTTTAACAAACATATATGATCATTTATTTGTTCCTACTGAAAAAGAGGGCTCCAAAGTGACAGTTTCTCGTTTGCCATACTTTGATGGAGACTTTTGGTGTGGTTCTGCTATGGAAAAAGCGAGGACCATTGAAAAAGAGAGTAGAGGAGACTATGATAATATGTTGAAGAAACAAGTGTCTACTAGAGCTTTAAAGACCATGGGACATGTCAATCCTTCGAAAGACGCTGCTAAAGACATTCTGGTGATGCAAAAATTGGGCCAAGATATATTGCCTACCAAGGAAAATTTCATTGTAGTTCACTTACAATATTCTTGCATACACTGCTGTGAAGTGATAATGTCTGGGAAGCGGTGGTTTTGCACTGAATGCAAGAATTTTCAGGAGTGTGGAAGTTGCCATAGTTCAAATGAACACACCTTAAAGAACGGAGAAGTGCATCCACTTTGTCAGGCCGTTGTTGATGATATCCCCTCCAGCACTAAGCATAATGATACCATCCTTGAGAATGGATTATTTGAAGATAGGAACAACTTTTTGAGCTTCTGCCAGAAGTATCAGTTTCAGTTTGACACACTCCGACGAGCCAAGTATTCCTCAATGATGATCCTCTACCATCTATGCAATCCTAGTCCTATGACTTCTGGAAAATGTTGTAGTATTTGTTGTGCACACAATGTGTTTCAAAAGTGCTGGAAATGTGAGGTTTGTCCAGATTGTACCATTTGCTCTGCATGCTATAAGGATAGAGGTGCTGACTGCCATGAACACAAGTTGACTCTAAATGAACACAATTCAACTCAAAATGAACTCAAGTTGGTTGAAAATAATTCAACATCACAATCTGATAATCAAGAGTCTAATGGGAAAATGATGTTAAAGAAAATGAAACTGGAGAAATTTTTGAAGAAAGTATCTCAACTTCGAAAGCATGTGTCACAAAGGAAAAAGTTGCTGAAACTGGAGATGATGTTGAAGCATGCATATCAATGCCCCGCAACTAGTGCTGAACCTTGCTCTGATACATCATGTCGTCAATTCAAGAAGTTTTTAAAGCATGCCAAAAGTTGCACAACTAATATTCGTGGCGGATGCGAGGATTGTGAAAATATATGGATTATACGATTTTCTCACTCCTTGGATTGCAAAGACTCAGAATGTATAATACAACATTGCAGCATGCTGAAGAAGCGTTTAGAATATAGAGGAATGCGTTCGAAATCTTGA 3708 0.391 MDYNSWFPVAYERKAYGTLRNYSPVFSDNIRKSGFDESCNQPVGFSTDWRDHPLRDGAASREEYMNLETLPRRAVSDNSKAHVTGYYSMPKGGQYDTSTVHDLPCFPDDRSSIPLVANMDVGSNLPVYGGESYLDANTRYIKNYFPHHQHTNNCDTDIQQPAKRKKMICGFSNPFPGWKSCLESQDAWKYLPQMLDFQKSSILRHDVNDVLAGNTEPLPVLPYSLNNDQWNNQLVQPYSSQTPLEVSQQLQFPPFSSINFANNGEELTNPMFHSTRLRGINNNEAGDTLEQIFEEPSLESDDVMEISSEEFAFSLKSRMRTLDMDPLDTGGEVMQGIAEFDRGITLNSNLPTLTEDVFLIDGEDIQDTTEFWTNTKKKVDEPTTDQETHTKCSNTTMHALKSKVPITIDVEDKHDIIGFNQEEKVVKRKVSDPKAVVDVVSLIDFFTHDQITEHINSLRKEPLQISTEDGTGIDANTCQLCEREKLYFSPVPIFCICCGRSIGRRKIYFCRKDEEFDAERCFCSSCYNASKGGCIPFNGTFVSKANLEKKTNDEVLEEPWVECNKCKRWQHQVCALYNNRKDLDCDVDYICAVCRLREIEDGVHVPLQKTTVYGAKDLPSTKLSDHLEKRLFKRLMEVKVDGGKVKGSENLDKVLAAESISIREVLSVDKQLKVKKQFLDIIPEKNYPTEFSYRLRVILLFQKIDGADICIFGLYVQEFGSECGNPNQRCVYISYLDSVKYFRPERVIVEGEALRTFVYHEILIGYLDFCKKRGFSTCHIWACPPSKRNDYILYCHPKEQKTPNNDKLRSWYLSMLKKATEEKIVVGLTNIYDHLFVPTEKEGSKVTVSRLPYFDGDFWCGSAMEKARTIEKESRGDYDNMLKKQVSTRALKTMGHVNPSKDAAKDILVMQKLGQDILPTKENFIVVHLQYSCIHCCEVIMSGKRWFCTECKNFQECGSCHSSNEHTLKNGEVHPLCQAVVDDIPSSTKHNDTILENGLFEDRNNFLSFCQKYQFQFDTLRRAKYSSMMILYHLCNPSPMTSGKCCSICCAHNVFQKCWKCEVCPDCTICSACYKDRGADCHEHKLTLNEHNSTQNELKLVENNSTSQSDNQESNGKMMLKKMKLEKFLKKVSQLRKHVSQRKKLLKLEMMLKHAYQCPATSAEPCSDTSCRQFKKFLKHAKSCTTNIRGGCEDCENIWIIRFSHSLDCKDSECIIQHCSMLKKRLEYRGMRSKS 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04891 1235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 553 598 IPR013083 -
Vivi2g04891 1235 ProSiteProfiles Zinc finger TAZ-type profile. 1138 1222 IPR000197 -
Vivi2g04891 1235 Pfam TAZ zinc finger 1150 1219 IPR000197 -
Vivi2g04891 1235 SUPERFAMILY RING/U-box 908 968 - -
Vivi2g04891 1235 SUPERFAMILY FYVE/PHD zinc finger 557 597 IPR011011 -
Vivi2g04891 1235 ProSiteProfiles Zinc finger ZZ-type profile. 928 981 IPR000433 GO:0008270
Vivi2g04891 1235 Gene3D TAZ domain 1135 1235 IPR035898 -
Vivi2g04891 1235 SUPERFAMILY RING/U-box 1022 1085 - -
Vivi2g04891 1235 SUPERFAMILY TAZ domain 1140 1223 IPR035898 -
Vivi2g04891 1235 ProSiteProfiles Zinc finger PHD-type profile. 520 597 IPR019787 -
Vivi2g04891 1235 Pfam Histone acetylation protein 651 860 IPR013178 GO:0004402|GO:0006355|GO:0016573
Vivi2g04891 1235 SMART KAT11_2 646 940 IPR013178 GO:0004402|GO:0006355|GO:0016573
Vivi2g04891 1235 SMART TAZ_2 1139 1220 IPR000197 -
Vivi2g04891 1235 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 612 1039 IPR031162 GO:0004402
Vivi2g04891 1235 PANTHER CBP/P300-RELATED 392 1227 IPR013178 GO:0004402|GO:0006355|GO:0016573
Vivi2g04891 1235 Gene3D - 926 975 IPR043145 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04891 Vivi-Chr2 168784234 168790491 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Vivi2g04891 HAT_KAT11 4.9e-32 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04891 K04498 - psat:127094503 1336.63