Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04888 ATGCTTCTTATGCCCGGTTTTCTACAAGTTGCATATTACTATTTCTTCTCAAGCAAGGTAAAGCGAAGCATTGTTTATGGAGATCAACCTAGAAACAGGTTGGATCTGTATCTACCTGCTGATGTCAGTGAACCTAAGCCAGTTTTGATTTTTGTAACCGGGGGAGCATGGATTATTGGGTATAAAGCATGGGGCTCCCTTTTAGGACTACAGTTGGCAGAAAGAGACATTATGGTGGCATGCATTGATTACAGAAATTTTCCTCAAGGAACCATCAGTGACATGGTAAATGATACTTGTCAGGGAATTTCCTTCGTCATTAACAACATAGCTAGTTATGGAGGTGACCCTAATAGGATTTACCTTATGGGACAATCTGCCGGTGCACATATTTCGTCTTGTGCTTTACTGGAACAAGCAGCCATAGAATCTGAAAATCGAGATAGTGTTTCATGGAGCATTTCACAGATAAAAGCTTATTTTGGTTTATCAGGAGGATACAACTTATTGGATTTAGTTGATCACTTTCACAATCGTGGCTTGTACCGTTCCATCTTTTTAAGTATAATGGAAGCTGAACAATCTTTGAAGAAATTTTCTCCCGAAATCAAAATTCAAGACCCTTGCATCAAAGATTCCATTCCTCTATTGCCCCCTATGTTTCTTTTCCACGGAACTGGTGATTATTCCATACCACCAATTGCCAGTAAACGGTTTGCTGATGCTCTTACGAAGGCAGGGGCAAGAGCTGAGCTGATTCTATATGATGGAAAAACACATACAGATTTGTTTCTTCAAGATCCACTCCGAGGTGGTAAAGAGGACCTATTTGAACATGTAGTTTCTATAGTACATGCAAATGATAGTGATGCTCTTGCAAAGGACGCCGTCGCACCGCCGAGGAAACGGCTTGTTCCTGAGATTTTATTAAAGTTAGCTCACAATATCAGTCCCTTCTAA 960 0.4042 MLLMPGFLQVAYYYFFSSKVKRSIVYGDQPRNRLDLYLPADVSEPKPVLIFVTGGAWIIGYKAWGSLLGLQLAERDIMVACIDYRNFPQGTISDMVNDTCQGISFVINNIASYGGDPNRIYLMGQSAGAHISSCALLEQAAIESENRDSVSWSISQIKAYFGLSGGYNLLDLVDHFHNRGLYRSIFLSIMEAEQSLKKFSPEIKIQDPCIKDSIPLLPPMFLFHGTGDYSIPPIASKRFADALTKAGARAELILYDGKTHTDLFLQDPLRGGKEDLFEHVVSIVHANDSDALAKDAVAPPRKRLVPEILLKLAHNISPF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04888 319 SUPERFAMILY alpha/beta-Hydrolases 16 283 IPR029058 -
Vivi2g04888 319 Gene3D alpha/beta hydrolase 15 268 IPR029058 -
Vivi2g04888 319 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 16 268 - -
Vivi2g04888 319 Pfam BD-FAE 34 243 - -
Vivi2g04888 319 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 14 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04888 Vivi-Chr2 168724488 168729910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04888 1 319 Carbohydrate Esterase AT1G26120 69.906 6.21e-168 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04888 K15889 - gmx:100788814 561.222