Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04887 ATGGCATCTCCCAACAACCACCGTGAACATCTCCGGAGACTAGCCGGCAAAAACAACCACCGCTCTCGCCCTGCTCGACAACGATTTTTCACCGGAGTTATTGAACACGTCGCCGCAGAGGCTTACTTGATCACTCACCTCGCCTTCACGCTTCTTCGATATCTCGGGGTTGGTTACCGTTGGATTACAAAATTGCTAGCTCTTGGATGTTATGCCATGCTTCTTATGCCCGGTTTTCTACAAGTTGCATATTACTATTTCTTCTCAAGCAAGGTAAAGCGAAGCATTGTTTATGGAGATCAACCTAGAAACAGGTTGGATCTGTATCTACCTGCTGATGTCAGTGAACCTAAGCCAGTTTTGATTTTTGTAACCGGGGGAGCATGGATTATTGGGTATAAAGCATGGGGCTCCCTTTTAGGACTACAGTTGGCAGAAAGAGACATTATGGTGGCATGCATTGATTACAGAAATTTTCCTCAAGGAACCATCAGTGACATGGTAAATGATACTTGTCAGGGAATTTCCTTCGTCATTAACAACATAGCTAGTTATGGAGGTGACCCTAATAGGATTTACCTTATGGGACAATCTGCCGGTGCACATATTTCGTCTTGTGCTTTACTGGAACAAGCAGCCATAGAATCTGAAAATCGAGATAGTGTTTCATGGAGCATTTCACAGATAAAAGCTTATTTTGGTTTATCAGGAGGATACAACTTATTGGATTTAGTTGATCACTTTCACAATCGTGGCTTGTACCGTTCCATCTTTTTAAGTATAATGGAAGCTGAACAATCTTTGAAGAAATTTTCTCCCGAAATCAAAATTCAAGACCCTTGCATCAAAGATTCCATTCCTCTATTGCCCCCTATGTTTCTTTTCCACGGAACTGGTGATTATTCCATACCACCAATTGCCAGTAAACGGTTTGCTGATGCTCTTACGAAGGCAGGGGCAAGAGCTGAGCTGATTCTATATGATGGAAAAACACATACAGATTTGTTTCTTCAAGATCCACTCCGAGGTGGTAAAGAGGACCTATTTGAACATGTAGTTTCTATAGTACATGCAAATGATAGTGATGCTCTTGCAAAGGACGCCGTCGCACCGCCGAGGAAACGGCTTGTTCCTGAGATTTTATTAAAGTTAGCTCACAATATCAGTCCCTTCTAA 1176 0.4243 MASPNNHREHLRRLAGKNNHRSRPARQRFFTGVIEHVAAEAYLITHLAFTLLRYLGVGYRWITKLLALGCYAMLLMPGFLQVAYYYFFSSKVKRSIVYGDQPRNRLDLYLPADVSEPKPVLIFVTGGAWIIGYKAWGSLLGLQLAERDIMVACIDYRNFPQGTISDMVNDTCQGISFVINNIASYGGDPNRIYLMGQSAGAHISSCALLEQAAIESENRDSVSWSISQIKAYFGLSGGYNLLDLVDHFHNRGLYRSIFLSIMEAEQSLKKFSPEIKIQDPCIKDSIPLLPPMFLFHGTGDYSIPPIASKRFADALTKAGARAELILYDGKTHTDLFLQDPLRGGKEDLFEHVVSIVHANDSDALAKDAVAPPRKRLVPEILLKLAHNISPF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04887 391 Pfam BD-FAE 106 315 - -
Vivi2g04887 391 MobiDBLite consensus disorder prediction 1 20 - -
Vivi2g04887 391 SUPERFAMILY alpha/beta-Hydrolases 84 355 IPR029058 -
Vivi2g04887 391 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 85 341 - -
Vivi2g04887 391 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 88 340 - -
Vivi2g04887 391 Gene3D alpha/beta hydrolase 87 340 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04887 Vivi-Chr2 168724190 168729910 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04887 26 391 Carbohydrate Esterase AT1G26120 68.306 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04887 K15889 - gmx:100788814 649.047