Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04839 ATGACTATTGGAAGTGATAGGAGGAACAAAGCAATTGTTGAAGAGAACGCACCTTTGTTACCCAAGACTCAAGAAAGTGATGTTGGGCTTGATGAATTTAACGGAGCTTCATTTTCTAGTGCTGTTTTCAATTTGTCAACCACAATTGTTGGTGCTGGAATCATGAGTTTACCTGCCTGTGTTAAAAAATTGGGGATAGTCCCTGGTCTTATTGCCATAATCCTATCCTCATTATTCACAGAAAAATCAGTTGATTTCATGATCAGATTTTCAAGAGCAGGCAATATTTCTTCCTATGGAAGTCTCATGGGTGATAGCTTTGGAAAATATGGGAGAGCTTTGGTCCAGATATGTATTACAGTCAATAATATTGGTGTTTTGATTGTTTACATGATTATTATTGGTGATATAATTTCTGGAACATCTTCAAGTGGAGTACACCATTTTGGTATTCTTGAAGGATGGTTTGGTGTTCATTGGTGTACAGGGAGAACATTTGTTCTTCTTTTTACAACACTTGTTATAATTGTACCTTTGACAAGCTTTAAAAGAATTGATTCGTTAAGATATACATCTGCGTTATCGGTTGGACTAGCCGGCGTTTATCTTGTGATTGTTGTAGGAATCTCAATTTTCAAAATCATAAGTGGAGGCATGGTGATTCCAAGACTCTTTCCAATCATTACTGATGCATCATCAGTTTTTGAATTGTTCACTACTTTTCCTGTACTTATAAGCGCCTATATTTGTCACACTGTTGTTCATAGCATAAATAATGAACTAAAGGATTCGAAACAGATGAGAGGGGTTGTGAAGACTTCTTTTGTTCTATGTTGCTTAGTGTACTTATTCACAAGCTTCTTTGGATTCTTTCTATTTGGAGAAGAAACTCTTGATGATGTTCTTGCCAATTTTGATACCGATCTTGATATACCGTTCGGTTTTATTCTCAATGACATTGTTCGCGTTAGCTACGCCGTACATATTGTGTTGATAATTCCAGTACTCTTCTACGCAGTGCGGATCAACTTTGATGGACTCTTGTTTTCTTCTTCATCAACAAGATCTTTGAATGTTGATAACTTCAGATTTTTCTCTATTACTTTTTCACTTGTTGGCATTATATTCTTGGGAGCAAATTTCATTCCTAGCATTTGGGATATCTTCCAATTCATTGGAGCAACTACTGCTATTTGTATAGCGTTTATATTTCCAGTTGCAATCACTCTCAGGGACAAACACAACATAGCAACTAAAACAGACAAGACTCTATCAATCTTTATGATAGTCATTTCAGTAACGTCTAGTGCTGTGGCTATATACAGCAATGTTTATGCGTTGATCAACAAGAAATGA 1356 0.3599 MTIGSDRRNKAIVEENAPLLPKTQESDVGLDEFNGASFSSAVFNLSTTIVGAGIMSLPACVKKLGIVPGLIAIILSSLFTEKSVDFMIRFSRAGNISSYGSLMGDSFGKYGRALVQICITVNNIGVLIVYMIIIGDIISGTSSSGVHHFGILEGWFGVHWCTGRTFVLLFTTLVIIVPLTSFKRIDSLRYTSALSVGLAGVYLVIVVGISIFKIISGGMVIPRLFPIITDASSVFELFTTFPVLISAYICHTVVHSINNELKDSKQMRGVVKTSFVLCCLVYLFTSFFGFFLFGEETLDDVLANFDTDLDIPFGFILNDIVRVSYAVHIVLIIPVLFYAVRINFDGLLFSSSSTRSLNVDNFRFFSITFSLVGIIFLGANFIPSIWDIFQFIGATTAICIAFIFPVAITLRDKHNIATKTDKTLSIFMIVISVTSSAVAIYSNVYALINKK 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04839 451 Pfam Transmembrane amino acid transporter protein 36 441 IPR013057 -
Vivi2g04839 451 PANTHER AMINO ACID TRANSPORTER 34 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04839 Vivi-Chr2 167844123 167847210 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04839 7 451 Amino Acid or Auxin Permease AAAP Family AT3G30390 59.508 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04839 K14207 - gmx:100791286 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g04839 2 167844123 167847210 Vivi6g00542 6 15173777 15177342 PCT