Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04833 ATGACAATTGGAACTCTTGCACCTGAGGCAGAGAATATGAAAATAAGGAAGAAGAGAGAAGTTTCTGATGAGAATGCACCTTTGTTACCTAAGTCTCAAGAAACAGATGGCGACTTTCATGAATTTAATGGAGCTTCATTTTCTGGGGCTGTTTTCAATTTGTCAACCACAGTTATTGGTGCTGGAATCATGGGCTTGCCTGCTTGCGTCAAGAAGTTGGGGATGGTGCCCGGTCTTCTTGCCATAATCTTAACGGCATTATTGACAGGGAAATCAATTGAGTTCATGATCAGATTTTCAAGGGCAGGAAATATATCTTCCTATGGAAGTCTGATGGGGGATGCCTTTGGTAAATACGGAAAAGCACTGATAGAAACATGTGTTGTAGTCGCTAACGTTGGTATTCTAATTGTTTACATGATTATTATTGGTGATGTTATTTCTGGAACTGCCTCAAGTGAAATTCATCATTCTGGTATCCTTGAAGGATGGTTTGGTGTCCATTGGTGGACCGGGCGTACTTTTGTTCTTGTTTTCACAACACTTGCTGTGTTTGCACCTTTGGTCAGCCTTAAGCGAATTGATTCATTGAGATTCACATCTGCATTATCAATTGGGTTAGCAGTTGTTTTCCTTATCATTGCTGTGGGGATCTCAATTTTCAAGATTATAAGTGGAGGCATTGGGATGCCAAGACTCTTCCCAATCATTACTGATGTAGCTTCAGTTTTTGATCTATTCACTGTAACCCCTGTGGTAATGTCAGCCTACATCTGTCACTATAATGTTCATAACATAGATAATGAACTGGAGGATTCCTCATGGATGCCTGGGGTTGTTCGTACTTCCCTTACACTATGCTCTTCAGTGTACGTACTGACAAGCTTCTTTACGTTCCTTCTATTTGGGGAAGAAACTCTTGATGACGTGCTAGCCAATTTTGATACTAATCTTGGAATTCCTTTTGGTTCCGTGCTCAACGACATTGTTCGTATTAGCTATGCTGCACATCTTGTGCTTGTATTTCCTGTAGTTTTCTATGGATTAAGGGTCAACATAGATGGTCTGATATTTACCTCCTCAAGAAGGCCTTTGGTTGCCGATAACTTCAGATTTGCATCAATTACTATTGGCCTTGTTGTCTCTATCTTCCTCGGAGCAAATTACATACCTAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACAGCTGCGGCTTGTGTAGGATTCATATGTCCAGCTGCAATCACTCTTAGGGATAAATACAACATGGCAACTAAAACAGACAGGATTCTGGCTGTCCTTATGATAATCCTTGCAGTCTTGTCAAATGCTGTGGCTATATACAGTGATGCCATTGCCTTGATCAAGAAGAATAAAACTTAA 1386 0.4062 MTIGTLAPEAENMKIRKKREVSDENAPLLPKSQETDGDFHEFNGASFSGAVFNLSTTVIGAGIMGLPACVKKLGMVPGLLAIILTALLTGKSIEFMIRFSRAGNISSYGSLMGDAFGKYGKALIETCVVVANVGILIVYMIIIGDVISGTASSEIHHSGILEGWFGVHWWTGRTFVLVFTTLAVFAPLVSLKRIDSLRFTSALSIGLAVVFLIIAVGISIFKIISGGIGMPRLFPIITDVASVFDLFTVTPVVMSAYICHYNVHNIDNELEDSSWMPGVVRTSLTLCSSVYVLTSFFTFLLFGEETLDDVLANFDTNLGIPFGSVLNDIVRISYAAHLVLVFPVVFYGLRVNIDGLIFTSSRRPLVADNFRFASITIGLVVSIFLGANYIPSIWDIFQFTGATAAACVGFICPAAITLRDKYNMATKTDRILAVLMIILAVLSNAVAIYSDAIALIKKNKT 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04833 461 PANTHER AMINO ACID TRANSPORTER 42 443 - -
Vivi2g04833 461 Pfam Transmembrane amino acid transporter protein 45 450 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04833 Vivi-Chr2 167701579 167705636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04833 11 459 Amino Acid or Auxin Permease AAAP Family AT5G38820 62.306 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04833 K14207 - gmx:100791286 712.605