LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi2g04832	ATGACGATTGGGAATCTTGCTTCTGAGAATAAGAAAACAAGGAAGAAGAGGGAAATTGTTAATGAGAATGAGCCTTTAATACCTAAGTCTCAAGAAAATGCTGAGTTTCATGAATTTAATGGAGCTTCGTTTTCCGGGGCTGTTTTCAATTTGGCAACCACTACTATTGGTGCTGGAATCATGGGGTTGCCTGCTTGCGTTAAGAAATTGGGAATGGTGCCTGGTCTTATTACCATAATCCTAATGGCATTGTTGACAGAGAAGTCGCTTGAGTTCATGATCAGGTTTTCAAGGGCGGGGAATCTTTCTGCTTATGGAAGTCTTATGGGGGATTCCTTTGGGAAAATTGGAAAAGCTTTGTTGGAGATATGTGTTGTAATCCATAACACTGGTGCTTTGATTGTGTACATGATTATTATTGGTGATGTGATTTCTGGAACAACGTCAAGTGGAATTCACCATTCTGGTATCCTTGAAGGATGGTTTGGTATCCATTGGTGGACCGGGCGTACATTTGTTATTGTTTTTACAACACTTTTTGTGTTTGCGCCTTTGGTTAGTCTTAAGCGAATTGATTCATTGAGATTCACATCTGCATTGTCAATTGGGTTAGCTGTTGTTTTCCTTATCGTCGCTGTGGGGATCTCAATTATCAAGATTATTAGTGGTGGCATTGGAATGCCCAGACTCTTCCCGGTCATTACTGACGCAGCTTCAGTTTTTGATCTATTCACTGTAGTTCCTGTCCTGGTGACCGCTTACATCTGTCACTACAATGTTCACAACATAGATAATGAACTGGAAGATTCTTCATGGATGCATGGGGTTGTGCGTACTTCCCTTACTCTATGCTCTTCAGTATACTTACTGACAAGCTTCTTTGCGTTCCTTCTATTTGGTGACGAAACTCTTGATGACGTGCTTGCCAATTTTGATACTAATCTTGGAATTCCTCTCGGTTCGGTGCTCAATGACGCTGTTCGTTTTAGCTATGCTGCACATCTTGTGCTTGTATTTCCTGTAGTTTTCTATGGGTTAAGGGTCAACGTAGATGGTCTAATATTTACCTCATCAAAAAGGCCTTTGGTTATTGATAACTTCAGATTTGCATCAATTACTATATCCCTCGTTGGCATTATCTTCATGGGAGCAAACTTCATACCTAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACTGCTGCTGTTTGTCTAGGATTCATATTTCCAGCTGCAGTCACTCTGAGGGATCGATATAACATAGCGACTAAAACAGACAAAATACTATCTGTTTTTATGATAGTCGTGGCAGTCTTGTCAAATGCTGTTGCGATATATAGTGATGCCTATGCCTTGATCAACAAAAATAAAAATGTCTGA	1380	0.4029	MTIGNLASENKKTRKKREIVNENEPLIPKSQENAEFHEFNGASFSGAVFNLATTTIGAGIMGLPACVKKLGMVPGLITIILMALLTEKSLEFMIRFSRAGNLSAYGSLMGDSFGKIGKALLEICVVIHNTGALIVYMIIIGDVISGTTSSGIHHSGILEGWFGIHWWTGRTFVIVFTTLFVFAPLVSLKRIDSLRFTSALSIGLAVVFLIVAVGISIIKIISGGIGMPRLFPVITDAASVFDLFTVVPVLVTAYICHYNVHNIDNELEDSSWMHGVVRTSLTLCSSVYLLTSFFAFLLFGDETLDDVLANFDTNLGIPLGSVLNDAVRFSYAAHLVLVFPVVFYGLRVNVDGLIFTSSKRPLVIDNFRFASITISLVGIIFMGANFIPSIWDIFQFTGATAAVCLGFIFPAAVTLRDRYNIATKTDKILSVFMIVVAVLSNAVAIYSDAYALINKNKNV	459

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi2g04832	459	Pfam	Transmembrane amino acid transporter protein	42	447	IPR013057	-
	Vivi2g04832	459	PANTHER	AMINO ACID TRANSPORTER	37	440	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi2g04832	Vivi-Chr2	167676736	167680574	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi2g04832	16	459	Amino Acid or Auxin Permease AAAP Family	AT5G38820	64.653	0.0	588

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi2g04832	K14207		-	gmx:100791286	707.597