LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi2g04829	ATGACAATTGGAACTAAGAAGAACAAGGGAGTTGTTGATGAGAACGCGCCTTTGGTACCGAACTCTTGGGAAACAGATGGCGAGTTACACGAGTTTAATGGAGGTTCATTTTCTGGGGCTGTTTTCAATCTGTCAACCACAATTATTGGTGCCGGAATCATGGGTTTGCCTGCTTGTGTTAAGAAATTGGGAATGGTGCCGGGTCTTATTGCCATAATCCTAACGGCATTATTGACAGAGAAGTCAATTGAGTTTATAATCAGGTTTTCAAGGGCAGGGAATATTTCTGCCTATGGAAGTCTTATGGGGGATGCCTTTGGGAAATATGGAAAAGCTTTGGTGGAGATATGTGTTGTTGTTAATAACATTGGTATTTTGATTGTTTACATGATTATCATCGGTGATGTGATTTCTGGAACAACTTCAGGTGGTATTCACCATTCTGGTATCCTTGAAGGATGGTTTGGTGTCCATTGGTTGACTGGGCGTCCATTTGTTCTTGTTTTTACGACACTTTTTGTGTTTGCACCTTTGGTTAGCTTTAAGCGAATTGATTCATTGAGATTCACATCTGCATTATCAGTTGGATTAGCTGTTGTTTTCCTTATCATTGCTGTGGGGATCTCAATTATAAAGATTATTAGTGGTGGCATTGGAATGCCCAGACTCTTCCCGGTCATTACTGATGCAGCTTCAGTTTTTGATCTATTCACTGTAGTTCCTGTGCTGGTGACCGCTTACATCTGTCACTACAACGTTCACAGCATAGATAATGAACTAGAAGATTCCTCATGGATGCAAGGGGTTGTGCGTACTTCCCTTACTCTATGCTGTTCAGTGTACTCACTCACAAGCTTCTTTGGATTCCTCCTATTTGGTGACAATACTCTTGATGATGTGCTTGCCAATTTCGATACTGATCTTGGAATTCCTTTGGGTTCGGCGCTCAATGACGCCGTTCGTCTTAGCTACGCCGCGCATCTTGTGCTTGTATTTCCCGTAGTTTTCTATGGACTAAGGGTCAACATAGATGGTCTGATATTTACCTCATCAAGAAGGCCTTTGGTTGTTGATAACTTCAGATTTGCATCAATTACTATTTCCCTTGTTGCCATTATCTTCATAGGAGCAAACTTCATACCTAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACCGCCGCTGTTTGTCTAGCATTCATATTTCCAGCTTCAATCACTCTGAAGGATCGATACAACATAGCAACTAAATCGGACAAAATACTATCTGTTCTTATGATAGTTCTGGCAGTCTTGTCAAATGCTGTTGCTATATACAGCGATGCATATGCTTTGATCAACAAGAACAAAAATGTGAGTGATTTTTTGATTTGA	1374	0.4083	MTIGTKKNKGVVDENAPLVPNSWETDGELHEFNGGSFSGAVFNLSTTIIGAGIMGLPACVKKLGMVPGLIAIILTALLTEKSIEFIIRFSRAGNISAYGSLMGDAFGKYGKALVEICVVVNNIGILIVYMIIIGDVISGTTSGGIHHSGILEGWFGVHWLTGRPFVLVFTTLFVFAPLVSFKRIDSLRFTSALSVGLAVVFLIIAVGISIIKIISGGIGMPRLFPVITDAASVFDLFTVVPVLVTAYICHYNVHSIDNELEDSSWMQGVVRTSLTLCCSVYSLTSFFGFLLFGDNTLDDVLANFDTDLGIPLGSALNDAVRLSYAAHLVLVFPVVFYGLRVNIDGLIFTSSRRPLVVDNFRFASITISLVAIIFIGANFIPSIWDIFQFTGATAAVCLAFIFPASITLKDRYNIATKSDKILSVLMIVLAVLSNAVAIYSDAYALINKNKNVSDFLI	457

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi2g04829	457	Pfam	Transmembrane amino acid transporter protein	35	440	IPR013057	-
	Vivi2g04829	457	PANTHER	AMINO ACID TRANSPORTER	33	433	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi2g04829	Vivi-Chr2	167658826	167661582	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi2g04829	13	449	Amino Acid or Auxin Permease AAAP Family	AT3G30390	67.506	0.0	587

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi2g04829	K14207		-	gmx:100791286	681.019