Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04827 ATGACAATTGGAACTAAGAAGAACAAGGGAGTTGTTGATGAGAACGCGCCTTTGGTACCGAACTCTTGGGAAACAGATGGCGAGTTACACGAGTTTAATGGAGGTTCATTTTCTGGGGCTGTTTTCAATCTGTCAACCACAATTATTGGTGCCGGAATCATGGGTTTGCCTGCTTGTGTTAAGAAATTGGGAATGGTGCCGGGTCTTATTGCCATAATCCTAACGGCATTATTGACAGAGAAGTCAATTGAGTTTATAATCAGGTTTTCAAGGGCAGGGAATATTTCTGCCTATGGAAGTCTTATGGGGGATGCCTTTGGGAAATATGGAAAAGCTTTGGTGGAGATATGTGTTGTTGTTAATAACATTGGTATTTTGATTGTTTACATGATTATCATCGGTGATGTGATTTCTGGAACAACTTCAGGTGGTATTCACCATTCTGGTATCCTTGAAGGATGGTTTGGTGTCCATTGGTTGACTGGGCGTCCATTTGTTCTTGTTTTTACGACACTTTTTGTGTTTGCACCTTTGGTTAGCTTTAAGCGAATTGATTCATTGAGATTCACATCTGCATTATCAGTTGGATTAGCTGTTGTTTTCCTTATCATTGCTGTGGGGATCTCAATTATAAAGATTATTAGTGGTGGCATTGGAATGCCCAGACTCTTCCCGGTCATTACTGATGCAGCTTCAGTTTTTGATCTATTCACTGTAGTTCCTGTGCTGGTGACCGCTTACATCTGTCACTACAACGTTCACAGCATAGATAATGAACTAGAAGATTCCTCATGGATGCAAGGGGTTGTGCGTACTTCCCTTACTCTATGCTGTTCAGTGTACTCACTCACAAGCTTCTTTGGATTCCTCCTATTTGGTGACAATACTCTTGATGATGTGCTTGCCAATTTCGATACTGATCTTGGAATTCCTTTGGGTTCGGCGCTCAATGACGCCGTTCGTCTTAGCTACGCCGCGCATCTTGTGCTTGTATTTCCCGTAGTTTTCTATGGACTAAGGGTCAACATAGATGGTCTGATATTTACCTCATCAAGAAGGCCTTTGGTTGTTGATAACTTCAGATTTGCATCAATTACTATTTCCCTTGTTGCCATTATCTTCATAGGAGCAAACTTCATACCTAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACCGCCGCTGTTTGTCTAGCATTCATATTTCCAGCTTCAATCACTCTGAAGGATCGATACAACATAGCAACTAAATCGGACAAAATACTATCTGTTCTTATGATAGTTCTGGCAGTCTTGTCAAATGCTGTTGCTATATACAGCGATGCATATGCTTTGATCAACAAGAACAAAAATGGTCTGATGGATTGA 1368 0.4108 MTIGTKKNKGVVDENAPLVPNSWETDGELHEFNGGSFSGAVFNLSTTIIGAGIMGLPACVKKLGMVPGLIAIILTALLTEKSIEFIIRFSRAGNISAYGSLMGDAFGKYGKALVEICVVVNNIGILIVYMIIIGDVISGTTSGGIHHSGILEGWFGVHWLTGRPFVLVFTTLFVFAPLVSFKRIDSLRFTSALSVGLAVVFLIIAVGISIIKIISGGIGMPRLFPVITDAASVFDLFTVVPVLVTAYICHYNVHSIDNELEDSSWMQGVVRTSLTLCCSVYSLTSFFGFLLFGDNTLDDVLANFDTDLGIPLGSALNDAVRLSYAAHLVLVFPVVFYGLRVNIDGLIFTSSRRPLVVDNFRFASITISLVAIIFIGANFIPSIWDIFQFTGATAAVCLAFIFPASITLKDRYNIATKSDKILSVLMIVLAVLSNAVAIYSDAYALINKNKNGLMD 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04827 455 Pfam Transmembrane amino acid transporter protein 35 440 IPR013057 -
Vivi2g04827 455 PANTHER AMINO ACID TRANSPORTER 33 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04827 Vivi-Chr2 167658823 167662075 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04827 13 449 Amino Acid or Auxin Permease AAAP Family AT3G30390 67.506 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04827 K14207 - gmx:100791286 681.019