Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04815 ATGTCTAAGAAGGGTTTGAAATCAATGAAGGATGAAAATCAAGAACTGCAGAAGCAAATTGGATGTATTAGTGGATTTTTTCTGATGTTTGACCGTCACAGATTCCTCACAGGCCAGAGCAACAGTCACAACAATATACCAAATCAAGGGGGAACAAGTAATAACATCAAAGAGCTGAATAATGCAACACAAAAGGCAAAGAATGTGAAGGTTGCAAGAGAGAATCAACCATCCTCGACAGAATCGTCATCTGGAACATCGATGTTTTCGTCGTCTTGTTCGTCTAGCATGTCATCCCTCGAGTTTAATCGGACAATACAGATAGAACCACCACCTTCGATAACTCAAGTGAAAATCAACGAAAAATCGAGTTCAGAAGAAGAGGTGAAGCAAAGGGATAAAGGAAGACAGGAGTCGCTTGATTTTCATGATATTGTCAAAGACTCAATGCGTATGGATTCACAAAGGTTATCGGTGAAAACTGTGGCTAAACAGGAAAAGAAGAGTCGAATACTGAAAAACGTCGACTCTCCGCGGCCTATGGCTGCTTGGGATTCACCAAGACTCTCTTATGATGGGAGAGATACACAAAGTACATTAAAATCTGCAACAAAGTTTAAGGAACTTCCTAGACTTTCCTTGGACAGCAAGGAAAGATCAATCAAAAGTTTCAACGAAGGAACGAAAACTCGAAACCTTTTGAAAGGTCCACAGAAAGTGTGTGGAAGCTCCAACCCAATCGAAAAGCAGGTAGAAGAACCAGAAAGTGCGAGAAGACCCTCGAGTGTTGTGGCGAAGTTGATGGGAATAGAAGCATTCCCTGATTGGAGCGAGACTTGTGACAGCTGCAACACCAACAAAAACGAGAGCTTTGTAGGATCTCGAATGAGCGATGAATACAGGAAGGATGGCTCGATCATGAATGTGTCACCATATTCAAAATGTTCCAAGAGTAGCGAATCATCAACAAAAGCATCAAATCGTTCCCTCTCAGTTTACGGTGAAATTGAGAAAAGGATGGCAGATCTAGAGTTCAAAAAATCCGGAAAGGATCTTAGAGCACTTAAACAGATTCTTGAAGCAATGCACAGATACAAAGAATCAATCGATACTACAAGTGATCAGGCTTCGAATTCTCCATACGACAATATGAGTAATAGTAGTGTCAGTGAAAGTTTGAGTGCACAAAGCCCAAGAACACCGCAGAAGAACCCGACATCGATAGCTGTTGGGAGGCCGAACTCAACTCAGGGTAGTAAATCACCAATTGTCATCATAAAACCAGCAAAAGTTGCAAGAAAAACGAATAATTCTTCGTCAACAGAAAGTTCAATTCATGGTAAATCATCGAGTAGCAAGGTTTACCGCGGTGATGCTACCAATGTCAAAGCTCCTCGAGATAAAAGCAACAAGATAACTTCAAAATTGATCCAATCCTCAAAAGTTCCTCGAGTTGTCATTGCAGAAAGCAACACCAGCTCTAACATGATGGCAGAGACCAGGAGCCCGAGACTACAAAAAAAGTTCGGTTTGGAAAAGCGTTCCCCGCCAACCAGTCCATCATCAGATATCAGCGGTAACAGAAGACAACAAAATAAGCAATCAACCGAATTGTCTTCCCCGAGTAAAACACCTAGACAAAAATTCTCTACGAAGGAAAGAAATGAAATTTTCGGTGAGATCGGCTATCAAAGGAGGGATTTTAAACAAGTTGAAGCTGTTTCTAGCGGTGATATAAAAGACTCGAGCAATGAAAACTTTACGGCTGAAACAAAAGTTACTGCAGAACAACCTAGTCCTGTGTCGGTTCTTGATGCTTCATTCTATAGAGAAGATCCACCTTCTCCGGTAAAAAGGAAATCAGACATCTCAAAAGATTTTGAGGAAGTTCTGAACAATTGTGATATTAGTGAGGACTCAGAAGATGTTGCTCTTTCATCGAACATGAACGCAAAACTCAACTTCAGTGATGGAACCAATGATCTTGACTTGATAACTCATAATTTGGTTCAAGTTCTTCAACAATTTGAGCATAGCGAGGATGAAAGATTCAAGAATTTCAGCGACCACGATAATCCTGACCACAAATATATAACAGAAATACTACTCGCATCAGGGAGGCTCACTAGTCCCGGCTCCAGCTACACATTGCATTTGTCGGGTCACCCGATTAACCCAACATTGTTTCTTGCACTAGAGAAAATCAAAACAAACGCGACGAATCTCAACATCGCTCAGACGAACAACACTCAAGAGAAGATGCAAAGAAAGCTCGTATTTGACGTGGTTAACGAGATTCTATTTCAGAAGCTAATAACAGAGAGTTCTTACAAGCCATATCATCCGGAACAAAGAAAACCAGAAGGACAACATCTTTTGGACATGCTTTGCACAGAAATCGATAAACTACAGCATAATAATCGCAACGTCGACCTGGCTGACGAGGACGAGTTTTTGACGAGTATTGTGTCGGAAGATTTGGTGCAACATTCCGCAACTACAGAATGCTGCAATGAGATACCGAATCTTGTGTTGGATATTGAGAGATTGATCTTCAAAGATTTGATAACTGAAATTGTGAGAAGTGAGTAA 2592 0.4097 MSKKGLKSMKDENQELQKQIGCISGFFLMFDRHRFLTGQSNSHNNIPNQGGTSNNIKELNNATQKAKNVKVARENQPSSTESSSGTSMFSSSCSSSMSSLEFNRTIQIEPPPSITQVKINEKSSSEEEVKQRDKGRQESLDFHDIVKDSMRMDSQRLSVKTVAKQEKKSRILKNVDSPRPMAAWDSPRLSYDGRDTQSTLKSATKFKELPRLSLDSKERSIKSFNEGTKTRNLLKGPQKVCGSSNPIEKQVEEPESARRPSSVVAKLMGIEAFPDWSETCDSCNTNKNESFVGSRMSDEYRKDGSIMNVSPYSKCSKSSESSTKASNRSLSVYGEIEKRMADLEFKKSGKDLRALKQILEAMHRYKESIDTTSDQASNSPYDNMSNSSVSESLSAQSPRTPQKNPTSIAVGRPNSTQGSKSPIVIIKPAKVARKTNNSSSTESSIHGKSSSSKVYRGDATNVKAPRDKSNKITSKLIQSSKVPRVVIAESNTSSNMMAETRSPRLQKKFGLEKRSPPTSPSSDISGNRRQQNKQSTELSSPSKTPRQKFSTKERNEIFGEIGYQRRDFKQVEAVSSGDIKDSSNENFTAETKVTAEQPSPVSVLDASFYREDPPSPVKRKSDISKDFEEVLNNCDISEDSEDVALSSNMNAKLNFSDGTNDLDLITHNLVQVLQQFEHSEDERFKNFSDHDNPDHKYITEILLASGRLTSPGSSYTLHLSGHPINPTLFLALEKIKTNATNLNIAQTNNTQEKMQRKLVFDVVNEILFQKLITESSYKPYHPEQRKPEGQHLLDMLCTEIDKLQHNNRNVDLADEDEFLTSIVSEDLVQHSATTECCNEIPNLVLDIERLIFKDLITEIVRSE 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04815 863 MobiDBLite consensus disorder prediction 371 422 - -
Vivi2g04815 863 MobiDBLite consensus disorder prediction 226 245 - -
Vivi2g04815 863 Pfam Domain of unknown function (DUF4378) 694 858 IPR025486 -
Vivi2g04815 863 MobiDBLite consensus disorder prediction 107 141 - -
Vivi2g04815 863 MobiDBLite consensus disorder prediction 223 260 - -
Vivi2g04815 863 MobiDBLite consensus disorder prediction 156 174 - -
Vivi2g04815 863 MobiDBLite consensus disorder prediction 515 546 - -
Vivi2g04815 863 MobiDBLite consensus disorder prediction 156 197 - -
Vivi2g04815 863 MobiDBLite consensus disorder prediction 40 94 - -
Vivi2g04815 863 MobiDBLite consensus disorder prediction 309 330 - -
Vivi2g04815 863 PANTHER LONGIFOLIA PROTEIN 1 863 IPR033334 GO:0051513
Vivi2g04815 863 MobiDBLite consensus disorder prediction 121 141 - -
Vivi2g04815 863 MobiDBLite consensus disorder prediction 369 476 - -
Vivi2g04815 863 MobiDBLite consensus disorder prediction 305 333 - -
Vivi2g04815 863 MobiDBLite consensus disorder prediction 489 552 - -
Vivi2g04815 863 MobiDBLite consensus disorder prediction 432 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04815 Vivi-Chr2 167300889 167305489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04815 1 863 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 30.337 1.84e-76 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04815 - - psat:127121234 1397.88