Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04813 ATGATTGAAATTCCATTAAAACAAGAAGTTCTTCAATCAAAGGATTCAACTACTTCATCATCATCATCATCAACATCACAATGGTTAAAACTAAAGGATCCAAGAATTGTGAGAGTATCAAGAGCCTTTGGAACAAAAGATAGACATAGCAAAGTATACACAATAAAAGGGCTAAGAGATAGAAGGGTAAGACTTTCAATTCAAACAGCAATTCATCTTTATGATCTTCAAGATAGATTAGGGCTTAATCAGCCTAGCAAAGTTGTTGATTGGTTGCTTAATATAGCTAAGGATGAAATTGATGAACTTCCTCCACTTCCAACACCTCAAGGAAATTTCACCCTAGGTTATCCATCTTTTGCTAGTACTATTTCTAATGAATATGTTAGCCAAAACAATACTTCTATTTGGAAATCAAATTCAAGACAAGGGTTAGGAGAAATTGTTACTAACAAAGAAAATTGGATAGATAGAAGCGAAAAGGAGAAAGAGAAAAAAGTGGAGAGTGATAATTGTGATTGCGCGCAATATATTGTACCAAACAATCTCTTATCAGATTTAGCGTCTGACCGTACTTCTAATGAAGAAAATCTACGAGAAATTTCTCAAAGAAATAATCTCTTACAAAGGGGACATCAGCCTTCTTTCTTGGGATTGTTGAACACCATGCCACTTGGTTGCCAATTGGAGCCTTCATCTAATCATGTTGCTCATGAGTTATCAAATTTTGGATTTGTAAACCATATTAAAGATATAGATGGAATTAATGTTGTACCTTTTCCGTCATCGTCGTCATCATCATTGTCCTTGTCTACACAACAATATTTACCTTCTTCACATGTTGGTGAAATGGAGATGGATACAAGAGAAATCAATTACAACTATGAACAAATGATGAATTCAAGTTCTCTCAATGCAACTCAACTATGA 930 0.3419 MIEIPLKQEVLQSKDSTTSSSSSSTSQWLKLKDPRIVRVSRAFGTKDRHSKVYTIKGLRDRRVRLSIQTAIHLYDLQDRLGLNQPSKVVDWLLNIAKDEIDELPPLPTPQGNFTLGYPSFASTISNEYVSQNNTSIWKSNSRQGLGEIVTNKENWIDRSEKEKEKKVESDNCDCAQYIVPNNLLSDLASDRTSNEENLREISQRNNLLQRGHQPSFLGLLNTMPLGCQLEPSSNHVAHELSNFGFVNHIKDIDGINVVPFPSSSSSSLSLSTQQYLPSSHVGEMEMDTREINYNYEQMMNSSSLNATQL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04813 309 ProSiteProfiles TCP domain profile. 45 103 IPR017887 -
Vivi2g04813 309 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 14 269 IPR005333 GO:0003700
Vivi2g04813 309 Pfam TCP family transcription factor 44 173 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04813 Vivi-Chr2 167283987 167286294 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04813 28 115 TCP Transcription Factor Family AT3G02150 75.000 2.72e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vivi2g04813 TCP 7.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04813 - - psat:127121245 495.738