Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04811 ATGTTTTCTTCTTATTTCACTTCAATTGTTATCAAATGGAGTTCCTTTACTCAATTCTTCTTCTTCTTCCTTCTCTTCTTAACCTCTCCATACGACGCCGTTTCACCTTTCTCCGACAAATCAACTCTTCTCCGTCTCAAAAACTCACTCTCCGACCCTGCCGGCGTACTGTCAGCATGGAACCCTTCCTCCGGCCACTGTTCCTGGTACGGTGTCCGCTGTGATTCAAACTTCCGTGTCGTTTCTCTCAACATCACCGGTAACGGCGGCGGCGGTGATGGTAACCGGAGTTCACATCCTTGCTCCGATTTTGGTATGTTTCCTCTTTACGGATTTGGAATTAGGAGAAGTTGTGTTGGTGTTAAGGGTTCTTTGTTGGGAAAGTTTCCATCTTTGATCAGTGACTTAACTGAGCTTAGGGTTCTTTCTTTACCCTTCAATGGGTTAGAGGGTTCAGTTCCTCATGAGATTTGGAGTATGGAGAAACTTGAAGTCCTTGATTTAGAAGGTAATTTGATTAGTGGTTATCTTCCTTTTCATATTCAAGGTTTGAAAAAATTGAGGGTTTTGAATTTGGGGTTTAATAGAATTGTTGGAGTGGTGCCTAGTGTTTTATCTTCTCTTGATAGTTTGGAGGTTTTGAATTTAGCTGCAAATGGTTTCAATGGTTCTGTTCCTGGTTTTGTTGGGAAGCTTAGAGGAGTGTATTTGTCTTTTAATCAATTTAGCGGAGTTATTCCGGATGAGATTGGTGAGAATTGTGGGAAGCTTGAGCATTTGGATTTGTCTGGTAACTCTTTGGTTCAAGAGATTCCCAAGAGTTTGGGGAATTGTGTTGGATTGAGGACACTTTTGTTGTATTCAAATTTGTTGGAAGAGGGTATTCCTGCTGAATTTGGAAACCTTAAGAGTCTTGAGGTGTTGGATGTTTCGAGGAATACACTAAGTGGTTCTATTCCTCGCGAGCTTGGGAATTGTAAAGAGCTTTCTGTTGTTGTGCTTTCCAACCTTTTTGATCCGATTGGGGATGCTGAGTTTGTTACTTTGAACGATGAGTTGAATTTTTTCGAAGGTTCAATGCCTGAGGAAGTTGTGTCGCTTCCTAAAATTGCGATTTTGTGGGCTCCCATGGTGAATTCGGAGGGAAGTTTTCCTAGGAATTGGGGTGCTTGCGGTAACTTGGAGATGGTTAGTTTGGCTCAGAATTTCTTCACCGGAGAGTTCCCGAACTGGCTTGGTTTATGCAAGAAGCTGCATTTTCTTGATCTGAGCTTAAACAGTCTTACAGGTGAGCTGTCCGAGGAACTACATGTGCCGTGTATGACTGTGTTTGATGTTAGTGGGAATATGTTGTCTGGTTCAGTTCCTGATTTCTCCAACAATGTCTGTTCTCCCTTTCCTTCCTGGAATGGGAATCTGTTCCAAACTGACGATGTGTCATCTCCTTATTCATCATACTTTTCATCAAAAGTTAGTGAGAGAACCCTTTTTGCATCACTAGGTGGAGTTGGTCTTTCAGTTTTTCACAACTTTGAGCAAAACAACTTCACCGGCATTCAGTCATTGCCAATAGCGCGTGACAGGATGGAGAAGAGTGGTTACACACTTCTTTTGGGAGAGAACAGGCTCACGGGACCATTTTCTATGTATTTGTTTGAGAAATGCGATGGATTAGATGCATTGCTTTTGAATGTGAGTTATAATATGCTTTCTGGTGAGATTCCTTCTAATATTAGTAGAATGTGCAAATCACTGAAATTTTTGGATGCATCTGGAAATCAGATTTCAGGAGTAATTCCCTTTACTCTAGGGGATTCAGTCTCTCTTGTTTCCTTGAACCTTAGTAAAAACCAGTTACAAGGTCCGATTCCCGACAGCCTTGGACAGATGAAGGATCTGAAGTTCCTCTCTTTGGCTGGTAACAACTTGAGTGGCTCAATTCCTTCTAATCTGGGGCAGTTGTACTCTTTACAAGTCTTGGACCTTTCTACAAACTCTCTTACTGGTGAGATTCCAAAGTTTATCGGCAAAATGAGAAATCTGACACATGTTTTGCTCAATAACAACAACCTTTCCGGACACATTCCTGCTGGTTTGGCAAATGTCAGTACACTCGCTGCATTTAATGTGTCTTTCAATAATTTATCTGGATATTTGCCATCAAATAGTACCTTGATCAAATGCAACAGTGCTGTTGGAAATCCATTTCTAAGTTCCTGCCGCGGAGTTTCTCTAACTGTTCCATCAGCAAATCAACAAGGGCAGATTGACGACAATTCTTCTATCACATCACCAACTCCTGTCAAAAATAGTGATAATAGTTTCAATGCTATTGAGATAGCAGCAATAACCTCTGCTTCGGCCATTGTTTCTGTTCTTATAGCCCTTATTGTTCTGTTTTTCTTCACGCGGAAGTGGAAGCCAAGGTCTAGGGTTGGTGGTTCTGTCAAAAGAGAAGTTACCGTGTTTACTGATATCGGTGTCCCGTTGACATTTGAAAACGTTGTCCAAGCCACGGGAAATTTCAATGCAAGCAACTGTATTGGGAGTGGAGGATTTGGTGCAACTTATAAGGCAGAGATATCACAAGGAACCTTGGTGGCAGTGAAACGTCTTTCAGTTGGGCGTTGCCAAGGTGTTCAACAATTTCATGCAGAAATCAAGACCCTTGGAAGGCTTCATCATCCAAACCTTGTCACTCTTTTTGGTTACCATGCTTCTGAAACAGAGATGTTTCTGATATACAATTATCTTTCGGGCGGTAATCTAGAAAAGTTCATCCAGGAGAGATCCACGAGGGCTGTAGATTGGAAAATTCTGCACAAGATTGCATTGGACATAGCGCGTGCACTTTCCTATCTGCACGATCAATGCGTACCTCGTGTTCTTCATCGTGATGTCAAGCCTAGCAATATCTTGTTGGATGATAGTTTCAACGCTTATCTATCCGACTTTGGACTAGCAAGACTTCTAGGAACTTCGGAGACACATGCTACAACAGGTGTGGCAGGAACGTTTGGTTACGTTGCTCCTGAATACGCTATGACATGTCGTGTTTCTGATAAAGCCGACGTTTATAGCTATGGTGTGGTGCTTCTTGAGTTGCTATCCGATAAGAAATTATTGGACCCTTCATTTTCCTCTTATGGAAATGGTTTCAATATAGTAGCATGGGGATGCATGCTTCTTAGTCAAGGAAGAGCGAAGGAGTTTTTCGCTGCCGGGTTATGGGAAGCAGGACCAGAAAAAGATTTGGTAGAGGTTCTACACCTAGCTGTTGTTTGTACTGTTGATTCATTATCAACTAGACCTACAATGAAACAGGTTGTGAAAAGGTTAAAGCAACTTCAACCTCCATCATGCTAG 3366 0.4195 MFSSYFTSIVIKWSSFTQFFFFFLLFLTSPYDAVSPFSDKSTLLRLKNSLSDPAGVLSAWNPSSGHCSWYGVRCDSNFRVVSLNITGNGGGGDGNRSSHPCSDFGMFPLYGFGIRRSCVGVKGSLLGKFPSLISDLTELRVLSLPFNGLEGSVPHEIWSMEKLEVLDLEGNLISGYLPFHIQGLKKLRVLNLGFNRIVGVVPSVLSSLDSLEVLNLAANGFNGSVPGFVGKLRGVYLSFNQFSGVIPDEIGENCGKLEHLDLSGNSLVQEIPKSLGNCVGLRTLLLYSNLLEEGIPAEFGNLKSLEVLDVSRNTLSGSIPRELGNCKELSVVVLSNLFDPIGDAEFVTLNDELNFFEGSMPEEVVSLPKIAILWAPMVNSEGSFPRNWGACGNLEMVSLAQNFFTGEFPNWLGLCKKLHFLDLSLNSLTGELSEELHVPCMTVFDVSGNMLSGSVPDFSNNVCSPFPSWNGNLFQTDDVSSPYSSYFSSKVSERTLFASLGGVGLSVFHNFEQNNFTGIQSLPIARDRMEKSGYTLLLGENRLTGPFSMYLFEKCDGLDALLLNVSYNMLSGEIPSNISRMCKSLKFLDASGNQISGVIPFTLGDSVSLVSLNLSKNQLQGPIPDSLGQMKDLKFLSLAGNNLSGSIPSNLGQLYSLQVLDLSTNSLTGEIPKFIGKMRNLTHVLLNNNNLSGHIPAGLANVSTLAAFNVSFNNLSGYLPSNSTLIKCNSAVGNPFLSSCRGVSLTVPSANQQGQIDDNSSITSPTPVKNSDNSFNAIEIAAITSASAIVSVLIALIVLFFFTRKWKPRSRVGGSVKREVTVFTDIGVPLTFENVVQATGNFNASNCIGSGGFGATYKAEISQGTLVAVKRLSVGRCQGVQQFHAEIKTLGRLHHPNLVTLFGYHASETEMFLIYNYLSGGNLEKFIQERSTRAVDWKILHKIALDIARALSYLHDQCVPRVLHRDVKPSNILLDDSFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKLLDPSFSSYGNGFNIVAWGCMLLSQGRAKEFFAAGLWEAGPEKDLVEVLHLAVVCTVDSLSTRPTMKQVVKRLKQLQPPSC 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04811 1121 Gene3D Phosphorylase Kinase; domain 1 806 917 - -
Vivi2g04811 1121 ProSiteProfiles Protein kinase domain profile. 842 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g04811 1121 CDD STKc_IRAK 848 1116 - -
Vivi2g04811 1121 Pfam Leucine Rich Repeat 256 278 IPR001611 GO:0005515
Vivi2g04811 1121 ProSitePatterns Serine/Threonine protein kinases active-site signature. 962 974 IPR008271 GO:0004672|GO:0006468
Vivi2g04811 1121 SUPERFAMILY L domain-like 36 337 - -
Vivi2g04811 1121 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 276 1115 - -
Vivi2g04811 1121 SUPERFAMILY L domain-like 299 460 - -
Vivi2g04811 1121 Gene3D Ribonuclease Inhibitor 37 229 IPR032675 -
Vivi2g04811 1121 FunFam Leucine-rich repeat receptor protein kinase EMS1 649 732 - -
Vivi2g04811 1121 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Vivi2g04811 1121 SMART serkin_6 842 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g04811 1121 SMART LRR_typ_2 678 701 IPR003591 -
Vivi2g04811 1121 SMART LRR_typ_2 254 278 IPR003591 -
Vivi2g04811 1121 SMART LRR_typ_2 229 253 IPR003591 -
Vivi2g04811 1121 SMART LRR_typ_2 302 326 IPR003591 -
Vivi2g04811 1121 SMART LRR_typ_2 630 654 IPR003591 -
Vivi2g04811 1121 SMART LRR_typ_2 136 160 IPR003591 -
Vivi2g04811 1121 SMART LRR_typ_2 184 207 IPR003591 -
Vivi2g04811 1121 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 918 1120 - -
Vivi2g04811 1121 FunFam Leucine-rich repeat receptor protein kinase EMS1 551 648 - -
Vivi2g04811 1121 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 806 917 - -
Vivi2g04811 1121 Gene3D Ribonuclease Inhibitor 463 780 IPR032675 -
Vivi2g04811 1121 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 345 522 - -
Vivi2g04811 1121 ProSitePatterns Protein kinases ATP-binding region signature. 848 870 IPR017441 GO:0005524
Vivi2g04811 1121 SUPERFAMILY L domain-like 535 741 - -
Vivi2g04811 1121 Gene3D Transferase(Phosphotransferase) domain 1 918 1118 - -
Vivi2g04811 1121 Gene3D Ribonuclease Inhibitor 230 340 IPR032675 -
Vivi2g04811 1121 Gene3D Ribonuclease Inhibitor 341 462 IPR032675 -
Vivi2g04811 1121 Pfam Protein kinase domain 845 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g04811 1121 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 247 338 - -
Vivi2g04811 1121 SUPERFAMILY Protein kinase-like (PK-like) 825 1113 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04811 Vivi-Chr2 167233343 167237218 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04811 38 1121 Receptor kinase-like Gene Family AT3G02130 63.318 0.0 1311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Vivi2g04811 Pkinase 4.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04811 - - gmx:100819882 1624.37