Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04807 ATGTTTTCTTCTTATTTCACTTCAATTATCATCAAATGGACTTCCTTTACTCAATTCATCTTCATCTTCTTCTTTCTCCTCTTAACCTATCAATACGACGCCGTTTCATCATACTCCGACAAATCAACTCTTCTCCGTCTCAAAAACTCACTCTCCGACCCCTCCGGTGTGCTCTCCACGTGGAACCCTTCCTCCGGCCACTGTTCCTGGTACGGTGTCCGTTGTGGTTCGAACTTCCGCGTCGTTTCTCTCAACATCACCGGTAACGGTGGCGGTGGTAACCGGAGTTCACATCCTTGCTCCGATTTTGGTATGTTTCCTCTTTACGGATTTGGAATTAGGAGAAGTTGTGTTGGTGTTAAGGGCTCTTTGTTAGGAAAGTTTCCATCTTTGATCAGTGACTTAACTGAGCTTAGGGTTCTTTCTTTACCCTTCAATGGGTTGGAGGGTTCGATTCCTCAAGAGATTTGGAGTATGGAGAAACTTGAAGTTCTTGATTTAGAAGGTAATTTGATTAGTGGTTATCTTCCTTTTCATATTCAAGGTTTGAAAACATTGAGGGTTTTGAATTTGGGGTTTAATAACATTGTTGGAGTGGTGCCTAGTGTTTTATCTTCTCTTGATAGTTTGGAAGTTTTGAATTTAGCTGCAAATGGTTTCAATGGTTCTGTTCCTGGTTTTGTTGGGAAGCTTAGAGGAGTGTATTTATCTTTTAATCAACTTAGCGGAGTTATTCCAGAGGAGATTGGTGAGAACTGTGGGAAGCTTGAGCATTTGGATTTGTCTGGTAACTCTTTGGTGCAACAGATTCCGAAGAGTTTGGGGAATTGTGGTGGGATGAAGACGCTTTTGTTGTATTCAAATTTGTTGGAAGAGGAAATTCCTGCTGAATTCGGTAATCTTAAGAGCCTTGTGGTGTTGGATGTTTCGAGGAATACGCTTAGTGGTTCTATTCCTCGCGAGCTTGGGAATTGTAAAGAGCTTTCTGTTGTTGTGCTATCCAACCTTTTTGATCCGATTGGGGATGCTGAGTTTGTTACTTTGAACGATGAGTTGAATTATTTTGAAGGTTCAATGCCTGAGGAAGTTGTGTCACTCCCTAAGCTTACGATTTTGTGGGCTCCCATGGTGAATTTGGAGGGAAGTTTTCCTAGGAATTGGGGTGCTTGTGGTAACTTGGAGATGGTTAGTTTGGCTCAGAATTTCTTCACCGGAGAGTTCCCGAACCGGCTTGGTTTATGCAAGAAGCTGCATTTTCTTGATCTGAGCTCAAACAATCTTACTGGGGAGCTTTCGAAGGAACTTCATGTTCCATGTATGGCTTTGTTTGATGTTAGTGACAACATTTTATCTGGTTCAGTTCCTGATTTCTCCAATAATGTTTGTTCTCCCTTTCCTTCATGGAATGGGAATCTGTTCGAATCTGACAACGTTGCATCTCCTTATGCATCATATTTCTCATCGAAAGCCCAGGAAAGAACCCTTTTCGCATCAATAGGGGGAGTTGGTCTTTCAGTTTTTCACAACTTGGGGCAAAACAACTTCAGTGGCATTCAGTCATTGCCTATAGCAGGAGACAGGATGGAGGAAAAGAGTGGTTACACCCTTCTTGTCAATCAGAACGAGCTCACCGGACCATTTCCTACATATTTGTTAGAGAAATGTGATGGATTTGCATTGCTTTTGAATCTAAGTTTTAATAGACTATCTGGTGAGATTCCTTCTAATATTAGTAGAATTTGTAAATCACTGAAAGTTTTGGATGCATCTGGAAATCGAATTTCAGGAGAAATTCCCTTTACTTTAGGGGATTCAGTCTCTCTTGTTTCCTTGAACCTCAGTAAAAATCAGTTACAAGGTCAGATTCCTGCCAGCCTTGGACAGATGAAAGATCTGAAGTTCCTCTCTTTGGCTGGTAATAACTTGAGTGACCCAATTCCTTCCAATCTGGGGCAGTTGTACTCTTTACAAGTCTTGGACCTTTCTACAAACTCTCTTACTGGTGAGATTCCAAAGTTTATTGAGAACATGAGAAATCTGACCGACGTTTTGCTCAATAACAACAACCTTTCTGGACACATTCCTGCTGGTTTGGCAAATGTTACTACACTCTCTATATTAAATGTGTCTTTCAATAACTTGTCTGGATACTTGCCCTCAAATAGCAGCTTGATCAAATGCAGCAGTGCTGTTGGGAATCCGTTTCTAAGTTCCTGCCGTGGAGTTTCTTTAACTGTGCCATCGGCAAATCAACAAGGGCAGGTTGATGATAATTCTTCTATTACTGCACAATCTACTGAAAAAAATAGCGACAATGGTTTCAGTGCTATTGAAATAGCATCTATTACTTCTGCTTCAGCCATTGTTTCTGTTCTTATAGCCCTCATTGTTCTGTTCTTTTTCACACGAAGGTGGAAGCCGAATTCCAGGGTTGGTGGTTCTGCCAAAAGAGAAGTTACAGTGTTTACTGATATCGGTGTCCCGTTGACATTTGAAAATGTTGTCCAAGCCACAGGAAATTTCAATGCAAGCAACTGTATTGGGAGTGGAGGATTTGGTGCAACTTATAAGGCAGAGATATCTCAAGGAAACTTGGTGGCAGTGAAACGTCTTTCAGTTGGACGTTTCCAAGGAGTTCAACAGTTTCATGCAGAGATTAAGACCCTTGGAAGGCTTCATCATCCAAATCTTGTCACTTTGATTGGTTACCATGCTTCTGAAACAGAGATGTTTCTAATATACAATTATCTTCCAGGCGGTAATCTAGAAAAGTTCATCCAGGAGAGATCCACTAGGGCTGTAGATTGGAAAATTCTGCACAAGATTGCATTGGATATAGCACGCGCACTTTCCTATCTGCACGATCAATGTGTACCACGTGTTCTTCATCGCGATGTCAAGCCTAGCAATATCTTGTTGGATGATGATTTCAATGCTTATCTATCCGACTTCGGCCTGGCCAGACTTCTTGGAACTTCAGAGACACATGCTACAACCGGAGTGGCAGGAACATTTGGGTATGTTGCTCCTGAATACGCCATGACATGTCGTGTTTCAGATAAGGCTGATGTGTATAGCTATGGTGTGGTACTTCTTGAGCTTCTATCAGATAAGAAAGCATTGGACCCTTCATTTTCTTCTTATGGTAATGGTTTCAATATTGTGGCATGGGGATGCATGCTACTTAGGGAAGGAAGGGCAAAGGAATTTTTCACTGCTGGTTTATGGGATGCAGGCCCAGAAAATGATTTGGTAGAGGTTCTTCACTTAGCTGTTGTCTGTACTGTTGACTCACTATCCACTAGACCTACAATGAAACAGGTTGTGAAAAGGCTAAAGCAACTGCAACCTCCATCATGTTAG 3363 0.4166 MFSSYFTSIIIKWTSFTQFIFIFFFLLLTYQYDAVSSYSDKSTLLRLKNSLSDPSGVLSTWNPSSGHCSWYGVRCGSNFRVVSLNITGNGGGGNRSSHPCSDFGMFPLYGFGIRRSCVGVKGSLLGKFPSLISDLTELRVLSLPFNGLEGSIPQEIWSMEKLEVLDLEGNLISGYLPFHIQGLKTLRVLNLGFNNIVGVVPSVLSSLDSLEVLNLAANGFNGSVPGFVGKLRGVYLSFNQLSGVIPEEIGENCGKLEHLDLSGNSLVQQIPKSLGNCGGMKTLLLYSNLLEEEIPAEFGNLKSLVVLDVSRNTLSGSIPRELGNCKELSVVVLSNLFDPIGDAEFVTLNDELNYFEGSMPEEVVSLPKLTILWAPMVNLEGSFPRNWGACGNLEMVSLAQNFFTGEFPNRLGLCKKLHFLDLSSNNLTGELSKELHVPCMALFDVSDNILSGSVPDFSNNVCSPFPSWNGNLFESDNVASPYASYFSSKAQERTLFASIGGVGLSVFHNLGQNNFSGIQSLPIAGDRMEEKSGYTLLVNQNELTGPFPTYLLEKCDGFALLLNLSFNRLSGEIPSNISRICKSLKVLDASGNRISGEIPFTLGDSVSLVSLNLSKNQLQGQIPASLGQMKDLKFLSLAGNNLSDPIPSNLGQLYSLQVLDLSTNSLTGEIPKFIENMRNLTDVLLNNNNLSGHIPAGLANVTTLSILNVSFNNLSGYLPSNSSLIKCSSAVGNPFLSSCRGVSLTVPSANQQGQVDDNSSITAQSTEKNSDNGFSAIEIASITSASAIVSVLIALIVLFFFTRRWKPNSRVGGSAKREVTVFTDIGVPLTFENVVQATGNFNASNCIGSGGFGATYKAEISQGNLVAVKRLSVGRFQGVQQFHAEIKTLGRLHHPNLVTLIGYHASETEMFLIYNYLPGGNLEKFIQERSTRAVDWKILHKIALDIARALSYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLREGRAKEFFTAGLWDAGPENDLVEVLHLAVVCTVDSLSTRPTMKQVVKRLKQLQPPSC 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04807 1120 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 805 916 - -
Vivi2g04807 1120 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 352 1114 - -
Vivi2g04807 1120 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 344 521 - -
Vivi2g04807 1120 SUPERFAMILY Protein kinase-like (PK-like) 822 1112 IPR011009 -
Vivi2g04807 1120 SUPERFAMILY L domain-like 61 231 - -
Vivi2g04807 1120 SMART LRR_typ_2 228 252 IPR003591 -
Vivi2g04807 1120 SMART LRR_typ_2 629 653 IPR003591 -
Vivi2g04807 1120 SMART LRR_typ_2 677 700 IPR003591 -
Vivi2g04807 1120 SMART LRR_typ_2 183 206 IPR003591 -
Vivi2g04807 1120 SMART LRR_typ_2 253 277 IPR003591 -
Vivi2g04807 1120 SMART LRR_typ_2 301 325 IPR003591 -
Vivi2g04807 1120 SMART LRR_typ_2 135 159 IPR003591 -
Vivi2g04807 1120 Gene3D Ribonuclease Inhibitor 228 341 IPR032675 -
Vivi2g04807 1120 ProSitePatterns Serine/Threonine protein kinases active-site signature. 961 973 IPR008271 GO:0004672|GO:0006468
Vivi2g04807 1120 MobiDBLite consensus disorder prediction 750 769 - -
Vivi2g04807 1120 SMART serkin_6 841 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g04807 1120 Gene3D Ribonuclease Inhibitor 342 477 IPR032675 -
Vivi2g04807 1120 Pfam Leucine rich repeat N-terminal domain 39 75 IPR013210 -
Vivi2g04807 1120 ProSitePatterns Protein kinases ATP-binding region signature. 847 869 IPR017441 GO:0005524
Vivi2g04807 1120 SUPERFAMILY L domain-like 230 723 - -
Vivi2g04807 1120 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 246 337 - -
Vivi2g04807 1120 Gene3D Ribonuclease Inhibitor 504 783 IPR032675 -
Vivi2g04807 1120 Pfam Protein kinase domain 844 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g04807 1120 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 579 743 - -
Vivi2g04807 1120 PRINTS Leucine-rich repeat signature 653 666 - -
Vivi2g04807 1120 PRINTS Leucine-rich repeat signature 417 430 - -
Vivi2g04807 1120 Gene3D Transferase(Phosphotransferase) domain 1 917 1117 - -
Vivi2g04807 1120 CDD STKc_IRAK 847 1115 - -
Vivi2g04807 1120 ProSiteProfiles Protein kinase domain profile. 841 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g04807 1120 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 917 1119 - -
Vivi2g04807 1120 Gene3D Phosphorylase Kinase; domain 1 805 916 - -
Vivi2g04807 1120 Gene3D Ribonuclease Inhibitor 37 227 IPR032675 -
Vivi2g04807 1120 Pfam Leucine Rich Repeat 255 277 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04807 Vivi-Chr2 167206182 167210307 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04807 39 1120 Receptor kinase-like Gene Family AT3G02130 62.860 0.0 1315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Vivi2g04807 Pkinase 2.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04807 - - gmx:100819882 1665.59