Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04786 ATGATGGATGATGCAATGGAGAAAAATTCAAGTGATGAGATATTTGAATTGCCACCTGGGTTTAGGTTTCATCCAACAGATGAAGAACTCATAACTCATTATCTTTCTCAAAAAGTTCTTGATAATTGCTTTTGTGCTTTAGCCATTGGTGAAGTTGATTTAAACATGTGTGAACCTTGGGATTTGCCTTGGAGGGCCAAAATGGGTGAGAAAGAGTGGTATTTCTTTTGTGTGAGGGACAGAAAATATCCTACTGGTCTAAGAACAAATAGGGCCACATGTGCGGGATATTGGAAGGCAACAGGTAAAGACAAAGAAATTTATAGAGAGAAGACATTAATTGGAATGAAGAAAACTTTAGTTTTCTACAAAGGAAGAGCTCCTAAAGGGGAAAAAACAAATTGGGTCATGCATGAATATAGATTAGAGGACACATTTTCTTTGCAAAATACATCCAAAAGAGCCATGAGGGAATGGTCTATATGCAGAGTTTTTGAGAAAAGTTCTATAGAAAACAAAATGCAAATTCAAGATTTGGCAAGGTTCAATTCAAATGGAAAAGAACAACTACCTCCATTGATGGATTCATCACCATACAACAACAATGAAACAAAAACAACTATTGGAGATTCATCCCATGTGACATGTTTCAATGACAACAACAACATAGTTGATGATAGATTTGAAAATCCTATGTTAACATCTTCATATTCTTCAAACCCTTCCTATGATACTATTTCCCCTGTCTCATGGACCCAAAATTTGTCACACCAATCAACACAAATTGGAAATTCATCACAATCCTCAGAAGAATCCATGTTGAAGATGTTGATTGAAAATAATGAGACAAAAAATCAGAAAGATCATCATGAATGTGACTATGATGTTGACATTGACATTTCAACTATGATGTATAATAATGAAATGTTTCAAAGATCTTATGTGAATGAAGAATATTCATCAGCTTCAATGGGACATTTTGATAATGGTTGCTTATGGAGTTTCTGA 1008 0.3442 MMDDAMEKNSSDEIFELPPGFRFHPTDEELITHYLSQKVLDNCFCALAIGEVDLNMCEPWDLPWRAKMGEKEWYFFCVRDRKYPTGLRTNRATCAGYWKATGKDKEIYREKTLIGMKKTLVFYKGRAPKGEKTNWVMHEYRLEDTFSLQNTSKRAMREWSICRVFEKSSIENKMQIQDLARFNSNGKEQLPPLMDSSPYNNNETKTTIGDSSHVTCFNDNNNIVDDRFENPMLTSSYSSNPSYDTISPVSWTQNLSHQSTQIGNSSQSSEESMLKMLIENNETKNQKDHHECDYDVDIDISTMMYNNEMFQRSYVNEEYSSASMGHFDNGCLWSF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04786 335 FunFam NAC domain-containing protein 100-like 26 171 - -
Vivi2g04786 335 SUPERFAMILY NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
Vivi2g04786 335 Gene3D NAC domain 26 171 IPR036093 GO:0003677|GO:0006355
Vivi2g04786 335 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
Vivi2g04786 335 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Vivi2g04786 335 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04786 Vivi-Chr2 166759604 166761969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04786 16 335 NAC Transcription Factor Family AT5G07680 51.212 6.88e-107 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi2g04786 NAM 1.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04786 - - gmx:100785620 421.779