Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04766 ATGATGGAGATTTTAACAACTACATCAACAACAACAACCACCACAAACACAAACACTACTCCTTTAACAACAATTTCAAAACCATCAGAACCCGAATCAGAAAACCCGACCCGAATCCAACCCATTAACACAACAACAACAACCTCAAACATAACAAAGCCTTTGTCTTTTTCAAATGGGGTTCTTAAACGCCACCACCCCAACACTCACAACAACGTTGTTGCTGCTGTTACTTACAAAGAATGTCTCAAAAACCACGTGGCGACTCTAGGTGGTCACGCACTAGACGGTTGTTGTGAATTCATGCCGTCACCAACCGCCACCTCCGACGACCCCGCTTCCATAAAATGCGCTGCTTGTGGATGTCACCGGAACTTCCACCGCCGTGAACCAGAAGAACCGATTTCCACCGTTTTTGAATATCAACCTCACCACCGCCACCACCCACCGCCTCCGCCGTTGTTCCAGTCCCGTTCACCAAGCTCCCCGTCTCCACCTCCGATCTCTTCATACCCATCAGCTCCACACATGCTCTTAGCACTCTCTGGTGCCGGAGTTGGATTCTCCATCCCGCCGGAAAACACAGCAGCGCCGTTAAGCCTTGGTTCTCCGATGGGAGCTAGTAGGAAAAGATTCCGAACGAAATTCACCCAAGAGCAGAAGGATAAGATGCATGAATTCGCTGAGAGAGTTGGGTGGAAGATGCAGAAGAGAGATGAAGAAATGGTTAACGGATTTTGCAATGAAGTTGGTGTTGATAGAAGTGTTCTCAAGGTTTGGATGCATAACAATAAGAACACTTTGGGAAGAAAATTGTCAGATCATGTGAATGGTGACGGCGCCGCCGTAAGATCCGCCGCTGACGGTGTCTCCGGTGGTGGTTTTGGTGTTCATGAGAATGATAATAATAATGGGATCAATGTTGCTGTTTGTGCTACTAATGGATCTTCTTCTTCTTCTTGA 963 0.4725 MMEILTTTSTTTTTTNTNTTPLTTISKPSEPESENPTRIQPINTTTTTSNITKPLSFSNGVLKRHHPNTHNNVVAAVTYKECLKNHVATLGGHALDGCCEFMPSPTATSDDPASIKCAACGCHRNFHRREPEEPISTVFEYQPHHRHHPPPPPLFQSRSPSSPSPPPISSYPSAPHMLLALSGAGVGFSIPPENTAAPLSLGSPMGASRKRFRTKFTQEQKDKMHEFAERVGWKMQKRDEEMVNGFCNEVGVDRSVLKVWMHNNKNTLGRKLSDHVNGDGAAVRSAADGVSGGGFGVHENDNNNGINVAVCATNGSSSSS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04766 320 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 79 130 IPR006456 -
Vivi2g04766 320 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 53 268 - -
Vivi2g04766 320 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 78 130 IPR006456 -
Vivi2g04766 320 NCBIfam homeobox domain, ZF-HD class 209 266 IPR006455 -
Vivi2g04766 320 Pfam ZF-HD protein dimerisation region 77 131 IPR006456 -
Vivi2g04766 320 SUPERFAMILY Homeodomain-like 200 270 IPR009057 -
Vivi2g04766 320 Gene3D - 200 269 - -
Vivi2g04766 320 MobiDBLite consensus disorder prediction 148 171 - -
Vivi2g04766 320 MobiDBLite consensus disorder prediction 1 51 - -
Vivi2g04766 320 MobiDBLite consensus disorder prediction 142 171 - -
Vivi2g04766 320 FunFam Zinc-finger homeodomain protein 2 199 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04766 Vivi-Chr2 166124664 166126028 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04766 2 265 ZF-HD Transcription Factor Family AT5G15210 50.549 1.82e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Vivi2g04766 ZF-HD_dimer 4.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04766 - - gmx:100814730 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g04766 2 166124664 166126028 Vivi7g00571 7 34015738 34017423 PCT