Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04730 ATGGAAAACACCGACCATTATGATTCCAACTACTATCGATACCGTGACAGTGGAACATCTGATTCTGAATCGGAGAATGACAGTAATTCGGTGTCCAGTGCGTACCAAAGTTCAAGTGATGGCGATGGCGATGGTGATAGTCACAATGAAAAATTCCATGAATTTGATGCAGTTGTAGGTGATAGAATACTGAAAATTGATGCCCTTACTGCTGATGAAATTCGTGCTATGGAATTCGGTACAGTTGATGAAGCTAATTTGTTTTATTTCAAGTATGCTAAATGTAAAGGGTTTGCCATTAGGAAAAGTGATGTTAGGAGAAGATCGACTGGGGGTGGACAAACAATTATAATGAGGCAGTTTGTATGCAATAAACGCGGTCTAAGAGATACAAAACACTTAAGGAGGCTTGATAGAAAAAGAGAACACAGACCTACGACCCGCACTAATTGTCCCGCTAGGCTTCGTGTGCATTACAACCCCCAGAAGGGTAGTTATGTAGTGTCATGTTTTGAAGAGGCTCACAACCATGAATTAACACCATCTAGGTTTATCCACTTACACCCTATTTATCGTGAGATTACTGCAGCAGATAGAGCTCAGATTGACGGTCTACAGTCAAATGAAATTAGAACTTGTCATATAATGGGGTACATGGTTGCTCAGAAGGGTGGACACGATCGTGTTGGGTTTACAAAGAAGGATCTGTACAATTATTTTGATAGTAAAATGCGTGCTACTATTAAAGATGGTGACGTTGCCGCTGCTATAAATTATCTAAATGTGAAGTCATCTACTGATCCCATGTTATATGGTAAATATGCCGTAGGCACGGATGGACGAATGAAGTCCCTTTTTTGGGATGATGGAAGCAGTAGATCTGACTATTTTTGTTTTGGCGATGTAATTGCGTTCGACACGACTTACAAGAAGAACAAATACAACTACCCATTGGTTATATTTTCAGGGTGTAACCACCACTCTCAGACAGTTATTTTTGGTGCTGCATTGGTGTCAGATGAAACGACAGAAACGTATAAGTGGTTGTTGGAGTGTTTTTTAGAGTGCATGGAAAATAAATACCCAGAAGCGGTTGTAACAGATGGAGATGGGGCGATGAGGGAATCTATAAAACAGGTGTTTCCGGATGCGACACATCGTTTATGCGCTTGGCATTTGAACAAGAATGCGACTGAGAATGTAAAGAACTCGGAATTTTTGAAAGATTTTCAAAAAGCCATGTACTCTAATTTTACAAAGGATCAATTTGAAGAGTTTTGGTCAAAAACAATTAAAGAAAACGGACTTGAAGGAAATCCTTGGGTTCAAAAAACGTACGAGAACAGGTCACTATGGGCAACTGCATATCTACGTGAGAAGTTTTTTGCACGTATAAGAACTACGTCTCAATGTGAAGCCGTCAATGCAATCATCAAGAGTTATGTCAGGAAGAAAGGCTGCATTTTTGAATTTATGCACAATTTTGATCAGGCTATGAGATGTTATAGAAACAATGAACTGATTGCCGATTTTAAATCAATGTTTTCAGAACCTGTGATGACTACTCAACTGCGTGCCCTTGAGAGCCATGCTGCGAAAGTTTATACCACGGAGATTTTCAAGGAAGTCAGAGATGAAATAGTGAAGGCTGGATCATTGATTGTTAAGGAAAGGTTATTTCACAACGGATTTAAGACTTATCGATTTACAAAATATTGTTATGATAACTATGACGTAGAGGTTGTGTATGATGGTGAAACACTTCAATGCGAGTGTAGGTTATGGGATTCTCGTGGGATTCCATGTTCTCATATGTTTGGTGTCATGAAGGAAGAACATGTTAGTCTCATTCCCACCGAGAAGCTTCAAAAAAGGAAGGTGTTTATGGGGACATAA 1896 0.394 MENTDHYDSNYYRYRDSGTSDSESENDSNSVSSAYQSSSDGDGDGDSHNEKFHEFDAVVGDRILKIDALTADEIRAMEFGTVDEANLFYFKYAKCKGFAIRKSDVRRRSTGGGQTIIMRQFVCNKRGLRDTKHLRRLDRKREHRPTTRTNCPARLRVHYNPQKGSYVVSCFEEAHNHELTPSRFIHLHPIYREITAADRAQIDGLQSNEIRTCHIMGYMVAQKGGHDRVGFTKKDLYNYFDSKMRATIKDGDVAAAINYLNVKSSTDPMLYGKYAVGTDGRMKSLFWDDGSSRSDYFCFGDVIAFDTTYKKNKYNYPLVIFSGCNHHSQTVIFGAALVSDETTETYKWLLECFLECMENKYPEAVVTDGDGAMRESIKQVFPDATHRLCAWHLNKNATENVKNSEFLKDFQKAMYSNFTKDQFEEFWSKTIKENGLEGNPWVQKTYENRSLWATAYLREKFFARIRTTSQCEAVNAIIKSYVRKKGCIFEFMHNFDQAMRCYRNNELIADFKSMFSEPVMTTQLRALESHAAKVYTTEIFKEVRDEIVKAGSLIVKERLFHNGFKTYRFTKYCYDNYDVEVVYDGETLQCECRLWDSRGIPCSHMFGVMKEEHVSLIPTEKLQKRKVFMGT 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04730 631 SMART 26again6 588 615 IPR006564 GO:0008270
Vivi2g04730 631 MobiDBLite consensus disorder prediction 23 42 - -
Vivi2g04730 631 MobiDBLite consensus disorder prediction 1 22 - -
Vivi2g04730 631 Pfam MULE transposase domain 302 396 IPR018289 -
Vivi2g04730 631 ProSiteProfiles Zinc finger SWIM-type profile. 577 613 IPR007527 GO:0008270
Vivi2g04730 631 Pfam FAR1 DNA-binding domain 88 180 IPR004330 -
Vivi2g04730 631 MobiDBLite consensus disorder prediction 1 50 - -
Vivi2g04730 631 Pfam SWIM zinc finger 580 607 IPR007527 GO:0008270
Vivi2g04730 631 PANTHER OS01G0519700 PROTEIN 74 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04730 Vivi-Chr2 165185480 165188156 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi2g04730 MULE 4.1e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04730 - - vvo:131620026 1216.45