Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04685 ATGAATACTATCAAATCAAACAAGGCTTGTGCAGCCTGCACACATCAAAGGAAAAAGTGTTTAAAGGATTGTCTTTTAGCTCCTTATTTTCCTGCCAATAAACCAAAAATGTTTCACAATGCTCATAGTTTGTATGGTGTTTCTAACATGGTGAGAATTCTAAATGAACTTCCAAAAGAGAAGAGAGATTTGGCAATGAGAACCTTAATTTATGAGTCAAATGTTCGTAAAATATATCCAATTGGCGGATGTGTTGATGTTATTAAGGATTATTGTGATAAGCTAAGCGAGGCTCTTGAAGAGTTAAATCAAGTAAAAAAGGTTCTAGATTATTGTAAAGTAAATCATTTACAATCACAAAATCTTTCCTCTTCGTTACCTTCTACAACTTCTACTAATTCTGATATTTCAAATATTCCAATATTTAACAATGTTGGGAATGTTACTAATTATTATAACAATAATGAAAATAATATAGAAACTATGATGAATGCATCTCCTTCTCATTGGAGTGATATCATTCCTCGTGATGTTAACAATACTCCAACTAATACAAATTGGAATATAAATTCAATGGATGCATCAAGGTTTGCGCAGTTGAGTGAAGGAGTCTTCAATAATAGAGAATCTGATCTTGGTGGTGGTGTTGATATTAGTACAGAAGAATGGTTGAAGGAAATCGAAAAAAAATTTAATGACGAAGATTACTTAATTCCAGACTCTGAAATTGATAGGATTTTAAATGGTGATGAACAAGCCTTTGTAGAAAAATATTCATCTCAAAGATTAGTAGAGAGGTGA 801 0.3159 MNTIKSNKACAACTHQRKKCLKDCLLAPYFPANKPKMFHNAHSLYGVSNMVRILNELPKEKRDLAMRTLIYESNVRKIYPIGGCVDVIKDYCDKLSEALEELNQVKKVLDYCKVNHLQSQNLSSSLPSTTSTNSDISNIPIFNNVGNVTNYYNNNENNIETMMNASPSHWSDIIPRDVNNTPTNTNWNINSMDASRFAQLSEGVFNNRESDLGGGVDISTEEWLKEIEKKFNDEDYLIPDSEIDRILNGDEQAFVEKYSSQRLVER 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04685 266 Coils Coil 88 108 - -
Vivi2g04685 266 Gene3D Antithrombin, subunit I, domain 2 131 177 IPR042178 -
Vivi2g04685 266 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 144 - -
Vivi2g04685 266 Pfam Lateral organ boundaries (LOB) domain 9 106 IPR004883 -
Vivi2g04685 266 Gene3D - 86 130 IPR042185 -
Vivi2g04685 266 ProSiteProfiles LOB domain profile. 8 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04685 Vivi-Chr2 164018514 164019512 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04685 6 122 AS2 family AT1G72980 44.628 6.10e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi2g04685 LOB 5.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04685 - - vvo:131650505 472.626