Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04683 ATGAATACTATCAAATCAAACAAGGCTTGTGCAGCCTGCACACATCAAAGGAAAAAGTGTTTAAAGGATTGTCTTTTAGCTCCTTATTTTCCTGCCCATAAACCAAAAATGTTTCACAATGCTCATAGTTTGTATGGTGTTTCTAACATGGTGAGAATTCTAAATGAACTTCCAAAAGAGAAGAGAGATTTGGCAATGAGAACCTTAATTTATGAGTCAAATGTTCGTAAAATATATCCAATTGGCGGATGTGTTGATGTTATTAAGGATTATTGTGATAAGCTAAGCGAGGCTCTTGAAGAGTTAAATCAAGTAAAAAAGGTTCTAGATTATTGTAAAGTAAATCATTTACAATCACAAAATCTTTCCTCTTCGTTACCTTCTACAACTTCTACTAATTCTGATATTTCAAATATTCCAATATTTAACAATGTTGGGAATGTTACTAATTATTATAACAATAATGAAAATAATATAGAAACTATGATGAATGCATCATCTCCTTCTCATTGGAGTGATATCATTCCTCGTGATGTTAACAATACTCCAACTAATACAAATTGGAATATAAATTCAATGGATGCATCAAGGTTTGCGCAGTTGAGTGAAGGAGTCTTCAATAATAGAGAATCTGATCTTGGTGGTGGTGTTGATATTAGTACAGAAGAATGGTTGAAGGAAATAGAAAAAAAATTTAATGACGAAGATTACTTAATTCCAGACTCTGAAATTGATAGGATTTATAATGGTGATGAACAAGCCTTTGTAGAAAAAGATTCATCTCAAAGATTAGTAGAGAGGTGA 804 0.3172 MNTIKSNKACAACTHQRKKCLKDCLLAPYFPAHKPKMFHNAHSLYGVSNMVRILNELPKEKRDLAMRTLIYESNVRKIYPIGGCVDVIKDYCDKLSEALEELNQVKKVLDYCKVNHLQSQNLSSSLPSTTSTNSDISNIPIFNNVGNVTNYYNNNENNIETMMNASSPSHWSDIIPRDVNNTPTNTNWNINSMDASRFAQLSEGVFNNRESDLGGGVDISTEEWLKEIEKKFNDEDYLIPDSEIDRIYNGDEQAFVEKDSSQRLVER 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04683 267 Coils Coil 88 108 - -
Vivi2g04683 267 Pfam Lateral organ boundaries (LOB) domain 9 106 IPR004883 -
Vivi2g04683 267 ProSiteProfiles LOB domain profile. 8 109 IPR004883 -
Vivi2g04683 267 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04683 Vivi-Chr2 163974397 163981253 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04683 6 122 AS2 family AT1G72980 44.628 1.49e-29 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi2g04683 LOB 8.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04683 - - vvo:131650505 488.034