Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04673 ATGAATACTATCAAATCAAACAAGGCTTGTGCAGCCTGCACACATCAAAGGAGAAAGTGTTCAAAAGATTGTCTTTTAGCTCCTTATTTTCCTGCCAATAAACCAAAAATGTTTCACAATGCTCATAGTTTGTATGGTGTTTCTAACATGGTGAGAATTCTAAATGAACTTCCAAAAGAGAAGAGAGATTTGGCAATGAGAACCATTATTTATGAGTCAAATGTTCGCAAGATATATCCAATTGGCGGATGTGTTGATGTTATTAAGGAATATTCTGATAAGATAAGCGAGGCTCTTGAAGAGTTAAATCAAGTAAAAAAGGTTTTAGATTATTGTAAAGTAAATCATTTACCATCACAAAATCTTTCCTCTTCACTACCTTCTCTAAGTTCTCAAAATCCAAATCTTCAACCACATTTTTCAATAGATCATTCTTTGAGAGATTCTATTAGTTCTCAAAATCCAAATCTTCAACCGCATTTTTCAATGGATCATTCTTTGAGAGCTTCTACATATTCTGATGTTTCAAATATTCCAATATTTAACAATGTCGAGAATGTTCCTAATTATTATCACAATAGTGAAAATAATATAGAAACTCTGACGAACGCAACTCCTTCAGATATCATTCTTCGTGATGTTAACAATGCTCCGACTAATACAAATTTGAATATAAATTCAATGGATGCAATAAGAGTTGCACAATTGAATTCTGATATTGATAGGTTTGATTTCAGTGATGGACAATTCTTTGTAGAATATGATTCATCTCAAAGGAATTAG 783 0.318 MNTIKSNKACAACTHQRRKCSKDCLLAPYFPANKPKMFHNAHSLYGVSNMVRILNELPKEKRDLAMRTIIYESNVRKIYPIGGCVDVIKEYSDKISEALEELNQVKKVLDYCKVNHLPSQNLSSSLPSLSSQNPNLQPHFSIDHSLRDSISSQNPNLQPHFSMDHSLRASTYSDVSNIPIFNNVENVPNYYHNSENNIETLTNATPSDIILRDVNNAPTNTNLNINSMDAIRVAQLNSDIDRFDFSDGQFFVEYDSSQRN 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04673 260 Coils Coil 88 108 - -
Vivi2g04673 260 Pfam Lateral organ boundaries (LOB) domain 9 106 IPR004883 -
Vivi2g04673 260 ProSiteProfiles LOB domain profile. 8 109 IPR004883 -
Vivi2g04673 260 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04673 Vivi-Chr2 163714451 163715341 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04673 6 135 AS2 family AT1G72980 40.146 2.73e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi2g04673 LOB 2.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04673 - - vvo:131650505 311.227