Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04640 ATGAAAATTGGAGAAATATGGACAAACCTAGGATCAATCACGGCTAGCATAATGTTTGTATATGCCATGTTTGATAAATTCTTCCCACCTCATCTTCGTAGATATTTTCTAAAATACACAAACAAATTCACAAGCCTTTTGTACCCTTATATCCAAATAACTTTCCATGAATTATCTGGTGATCATCTTAAACGTAGCCAAACCTACAAAACCATCCAAACATATCTCAGCGCGAACTCGTCACAAAGTGCTAGAAGACTTAAAGCTGAAGTTATCCAAGATAGCCAAAATCCATTAGTCCTAAGCATGGATGATAACCAAGAGATCATCGATGAGTTCAATGGAATCAAAGTTTGGTGGTCTGCAAATCACACCATTTCAAAATCACAATCATTTTCATTTTACCCTACTTCGGATGAGAAGAGATTCTTAACATTAACCTTCCACAAAAGAAATCGGGATGTTATAACTACGTCGTATATTCAACATGTGTTGGCAGAAGGAAAGGCGATTACAACGGAGAATAGGCAGTTAAAGCTTTACACCAACAATCCAAGCAAGGAATGGATGAGGTATATGAGTACAAAGTGGAGTCATACAACTTTTGAGCACCCTGCGAGATTTGAAACACTTGCTATGGAGCCGGAGAAGAAAGAAGAGATTATAAATGATCTTCTTAAGTTCAAAGAAGGGAAGGAGTACTATACTAAAGTTGGAAAGGCTTGGAAGCGTGGTTATTTACTTTTCGGTCCTCCGGGGACTGGAAAATCTACCATGATATCTGCTATTGCTAATTTCATGAACTATGATGTGTATGATCTTGAGTTAACAGTTGTTAAGGATAACAATGAGTTGAAAAGGCTTTTAATTGAGACGTCGAACAAATCAATTATAGTGATTGAAGATATTGATTGTTCTTTGGATCTTACTGGCCAAAGGAAGATGAAAAAAGAGAAAGATGATGATGAGAATGAAGAAAAAAAGAAACTTGTAGAAAAAGCTAAAGGAGAAGAGAAAAATGAAAGTAAGTTAACTCTTTCGGGTTTGTTGAATTTTATTGATGGAATTTGGTCGGCCTGTGGAGGGGAGAGGATCATAATATTTACGACGAATTTTGTGGATAAACTTGATCCTGCTCTCATTAGGAGGGGAAGGATGGATAAGCACATAGAGATGTCATATTGTGGATATGAAGCTTTCAAGGTTCTTGCAAGGAATTACTTAGATGTTGAATCTCATGATGAGTTGTTTCCGGTTATTGGAAAGTTGTTGGGAGAGACTAATATGACACCTGCTGATGTTGCTGAGAATTTGATGCCAAAGTCTATTACTCAAAACTTTGAAACTTGTTTGAAGAAGTTGATTCAATCTCTTGAGGAAGCAAAGAAAAAGGTAGAGGAGGAGGAAGCAAAGAAAAAAGCTGAGGAAGAGGAAGCAAGAGTTAAGGAAGAGAAAGAAAAACAAGTAATTGCTCAAGAGGAAGAAAATGTGAAGGCTAATGAAAATTCTAAGGAGAATGGTTTCAAAGATTAA 1533 0.3653 MKIGEIWTNLGSITASIMFVYAMFDKFFPPHLRRYFLKYTNKFTSLLYPYIQITFHELSGDHLKRSQTYKTIQTYLSANSSQSARRLKAEVIQDSQNPLVLSMDDNQEIIDEFNGIKVWWSANHTISKSQSFSFYPTSDEKRFLTLTFHKRNRDVITTSYIQHVLAEGKAITTENRQLKLYTNNPSKEWMRYMSTKWSHTTFEHPARFETLAMEPEKKEEIINDLLKFKEGKEYYTKVGKAWKRGYLLFGPPGTGKSTMISAIANFMNYDVYDLELTVVKDNNELKRLLIETSNKSIIVIEDIDCSLDLTGQRKMKKEKDDDENEEKKKLVEKAKGEEKNESKLTLSGLLNFIDGIWSACGGERIIIFTTNFVDKLDPALIRRGRMDKHIEMSYCGYEAFKVLARNYLDVESHDELFPVIGKLLGETNMTPADVAENLMPKSITQNFETCLKKLIQSLEEAKKKVEEEEAKKKAEEEEARVKEEKEKQVIAQEEENVKANENSKENGFKD 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04640 510 Gene3D - 195 390 IPR027417 -
Vivi2g04640 510 Gene3D - 391 457 - -
Vivi2g04640 510 PANTHER BCS1 AAA-TYPE ATPASE 10 468 - -
Vivi2g04640 510 Pfam ATPase family associated with various cellular activities (AAA) 247 393 IPR003959 GO:0005524|GO:0016887
Vivi2g04640 510 MobiDBLite consensus disorder prediction 314 334 - -
Vivi2g04640 510 CDD RecA-like_BCS1 221 392 - -
Vivi2g04640 510 MobiDBLite consensus disorder prediction 464 510 - -
Vivi2g04640 510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 443 IPR027417 -
Vivi2g04640 510 ProSitePatterns AAA-protein family signature. 364 383 IPR003960 GO:0005524|GO:0016887
Vivi2g04640 510 SMART AAA_5 242 396 IPR003593 GO:0016887
Vivi2g04640 510 Coils Coil 448 502 - -
Vivi2g04640 510 Coils Coil 317 337 - -
Vivi2g04640 510 FunFam AAA-ATPase ASD, mitochondrial 198 390 - -
Vivi2g04640 510 Pfam Domain associated at C-terminal with AAA 28 122 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04640 Vivi-Chr2 163123205 163125233 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04640 208 497 Miscellaneous Gene Families AT3G47060 26.214 1.17e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04640 - - pvu:PHAVU_004G024700g 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g00173 6 4614277 4615845 Vivi2g04640 2 163123205 163125233 PCT