Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04638 ATGGCAATTGGAATTGGTGAAATATGGTCACAAGTAGGTTCAATCATGGCTAGCATAATGTTTGTGTATGCCATGTATGAACGATTCTTCCCACAACATCTTCGTGGTTATTTTCTCAAATACACAAGCAAATTCTCAACCCTTTTCTATCCATATATACAAATCAAATTCCATGAACTATCCGGAGAGAAACTCAAACACAGCGAGACTTACCAAACCATCCAAACATATCTCAGCTCAAGTTCTTCCAAAGGTGCCAGAAAACTTAAAGCCGAAGTTGTACAAGATAGCCAAACCCCTCTTGTTCTAAGCATGGACGACAATGAAGAAATCGTCGACGAATTCAATGGAATCAAAGTTTGGTGGTCTGCAAATCACACCACTTCAAAATCACAAGCATTTTCTTACTATCCAGTTTCGGACGAGAAAAGATTCTTAACATTAACCTTCCATAAAAGAAATCGCGATGTTATAACTACCTCCTACATTCAACATGTGCTGGAAGAAGGAAAAGTGATTACAATGAAGAATAGACAGTTGAAGCTTTACACCAACAATCCAAGCAACAATTGGTGGGGTTCTAGGACCTCGAAGTGGAGTCACGCTATTTTCGAGCACCCTGCGAGATTTGAAACACTTGCTATGGAGCCGGAGAAGAAAGAAGAGATCATAAACGATCTTGTGAAGTTTAAGAGAGGGAAAGAGTATTATGCGAAAGTTGGGAAAGCATGGAAGCGCGGTTATCTACTTTTCGGTCCACCAGGGACTGGAAAATCTACTATGATTTCAGCTATTGCGAATTTCATGAACTATGATGTTTATGATCTTGAGTTAACAACTATTAAGGATAACAATGAGTTGAAGAGACTATTGATTGATACGTCCAGTAAATCAATTATAGTGATTGAAGATATTGATTGCTCTTTGGATCTTACTGGCCAAAGGAAGGAGAAAAAGGAGAAAGATGATGATGAGAATGCGGAAAAAATGGATCCTATTAAAAAGGCTGAGAAAGAAGAGCAAAAGAAAAGTAAGTTAACTTTATCTGGTTTGTTGAATTTTATAGATGGAATTTGGTCGGCGTGTGGATCGGAGAGGATTATAATATTTACGACGAATTTTGTGGATAAACTTGATCCTGCTCTGATTAGGAGGGGAAGGATGGATAAGCACATAGAGATGTCATATTGTGGATATGAAGCTTTCAAGGTGCTTGCAAGGAATTACTTAGATGTTGAATCTCATGATGAGTTGTTTCCGGTTATTGGAAAGTTGTTGGGAGAGACTAATATGACACCTGCTGATGTTGCTGAGAATTTGATGCCAAAGTCTATTACTCAAGATTCTGAGTCTTGTTTGAAGAATTTGATTCAATCTCTTGAGATTGAAAAGAAAAAAATAGAGGAGGAAGCAAAGAAAAAGGTTGAGGATGAGGCAGAGAAAGAAAAACAAGAATTGAATAAAGAGAAAGAGAAGGTTAAGGATAATGAAAAATCAGAAGAAAAAGAAGTGAAGGAGAATGGTTTCACTCATTAA 1536 0.3743 MAIGIGEIWSQVGSIMASIMFVYAMYERFFPQHLRGYFLKYTSKFSTLFYPYIQIKFHELSGEKLKHSETYQTIQTYLSSSSSKGARKLKAEVVQDSQTPLVLSMDDNEEIVDEFNGIKVWWSANHTTSKSQAFSYYPVSDEKRFLTLTFHKRNRDVITTSYIQHVLEEGKVITMKNRQLKLYTNNPSNNWWGSRTSKWSHAIFEHPARFETLAMEPEKKEEIINDLVKFKRGKEYYAKVGKAWKRGYLLFGPPGTGKSTMISAIANFMNYDVYDLELTTIKDNNELKRLLIDTSSKSIIVIEDIDCSLDLTGQRKEKKEKDDDENAEKMDPIKKAEKEEQKKSKLTLSGLLNFIDGIWSACGSERIIIFTTNFVDKLDPALIRRGRMDKHIEMSYCGYEAFKVLARNYLDVESHDELFPVIGKLLGETNMTPADVAENLMPKSITQDSESCLKNLIQSLEIEKKKIEEEAKKKVEDEAEKEKQELNKEKEKVKDNEKSEEKEVKENGFTH 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04638 511 FunFam AAA-ATPase ASD, mitochondrial 200 392 - -
Vivi2g04638 511 Pfam Domain associated at C-terminal with AAA 30 124 IPR025753 -
Vivi2g04638 511 PANTHER BCS1 AAA-TYPE ATPASE 11 469 - -
Vivi2g04638 511 MobiDBLite consensus disorder prediction 471 511 - -
Vivi2g04638 511 Gene3D - 202 392 IPR027417 -
Vivi2g04638 511 Coils Coil 450 507 - -
Vivi2g04638 511 SMART AAA_5 244 398 IPR003593 GO:0016887
Vivi2g04638 511 ProSitePatterns AAA-protein family signature. 366 385 IPR003960 GO:0005524|GO:0016887
Vivi2g04638 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 444 IPR027417 -
Vivi2g04638 511 Pfam ATPase family associated with various cellular activities (AAA) 249 395 IPR003959 GO:0005524|GO:0016887
Vivi2g04638 511 Gene3D - 393 468 - -
Vivi2g04638 511 CDD RecA-like_BCS1 223 394 - -
Vivi2g04638 511 MobiDBLite consensus disorder prediction 315 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04638 Vivi-Chr2 163080709 163082567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04638 210 394 Miscellaneous Gene Families AT3G47060 31.088 6.88e-11 63.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g04638 2 163080709 163082567 Vivi6g00173 6 4614277 4615845 PCT